RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	PRK1	P40494	810 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	MAD1	P40957	749 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	BRE2	P43132	505 aa		1.95	□□□□□ -2.1
SMC4	YLR086W	TY1A-DR2	Q03964	440 aa	Known RBP	1.95	□□□□□ -2.1
SMC4	YLR086W	MRPL16	P38064	232 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	FAR11	P53917	953 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	MEC3	Q02574	474 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	OPI10	Q08202	246 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	GCR1	P07261	785 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	MRP8	P35719	219 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	TFA2	P36145	328 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	GGA2	P38817	585 aa	Known RBP	1.94	□□□□□ -2.1
SMC4	YLR086W	PEX28	P38848	579 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	SCW11	P53189	542 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	SPC42	P36094	363 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	YHR020W	P38708	688 aa	Known RBP	1.94	□□□□□ -2.1
SMC4	YLR086W	YNR065C	P53751	1116 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	NAN1	Q02931	896 aa	Known RBP	1.94	□□□□□ -2.1
SMC4	YLR086W	YLL054C	Q12244	843 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	RKM4	Q12504	494 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	LYP1	P32487	611 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	RPN3	P40016	523 aa	Known RBP	1.94	□□□□□ -2.1
SMC4	YLR086W	ROG3	P43602	733 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	YJR124C	P47159	448 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	UTP8	P53276	713 aa	Known RBP	1.94	□□□□□ -2.1
SMC4	YLR086W	ALD6	P54115	500 aa	Known RBP	1.94	□□□□□ -2.1
SMC4	YLR086W	HDA2	Q06629	674 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	DPH6	Q12429	685 aa		1.94	□□□□□ -2.1
SMC4	YLR086W	INO80	P53115	1489 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	1.93	□□□□□ -2.1	not detected
SMC4	YLR086W	RAD27	P26793	382 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	DLD1	P32891	587 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	1.93	□□□□□ -2.1	not detected
SMC4	YLR086W	IRR1	P40541	1150 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	PPT1	P53043	513 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	CUZ1	P53899	274 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	JIP5	Q06214	492 aa	Predicted RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	CIT2	P08679	460 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	DBP5	P20449	482 aa	Known RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	PBY1	P38254	753 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	RGD1	P38339	666 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	POL5	P39985	1022 aa	Known RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	JJJ3	P47138	172 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	UTP22	P53254	1237 aa	Predicted RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	SPO71	Q03868	1245 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	WRS1	Q12109	432 aa	Known RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	MSH3	P25336	1018 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	RER2	P35196	286 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	ADD66	P36040	267 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	BRN1	P38170	754 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	ECM2	P38241	364 aa	Known RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	VAC8	P39968	578 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	SIT1	P39980	628 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	MPH1	P40562	993 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	FET4	P40988	552 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	HAS1	Q03532	505 aa	Known RBP	1.93	□□□□□ -2.1
SMC4	YLR086W	YLL058W	Q12198	575 aa		1.93	□□□□□ -2.1
SMC4	YLR086W	FPS1	P23900	669 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	GRX1	P25373	110 aa	Known RBP	1.92	□□□□□ -2.1
SMC4	YLR086W	YKL077W	P36081	392 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	YBR238C	P38330	731 aa	Known RBP	1.92	□□□□□ -2.1
SMC4	YLR086W	UTP5	Q04177	643 aa	Known RBP	1.92	□□□□□ -2.1
SMC4	YLR086W	GIS4	Q04233	774 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	TY4B-P	A0A0B7P3V8	1104 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	MET22	P32179	357 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	MTR4	P47047	1073 aa	Known RBP	1.92	□□□□□ -2.1
SMC4	YLR086W	VPS53	P47061	822 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	FAA4	P47912	694 aa	Known RBP	1.92	□□□□□ -2.1
SMC4	YLR086W	TY4A-H	Q6Q5P6	413 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	PDC5	P16467	563 aa	Known RBP	1.92	□□□□□ -2.1
SMC4	YLR086W	MKK2	P32491	506 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	SFA1	P32771	386 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	UGA4	P32837	571 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	SQT1	P35184	431 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	BAP2	P38084	609 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	NEM1	P38757	446 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	CNN1	P43618	361 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	HNT2	P49775	206 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	TYW3	P53177	273 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	ALG12	P53730	551 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	GDE1	Q02979	1223 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	YPL260W	Q08977	551 aa		1.92	□□□□□ -2.1
SMC4	YLR086W	TRP2	P00899	507 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	GPM1	P00950	247 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	AFG2	P32794	780 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	PFD1	P46988	109 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	YMR265C	Q03508	461 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	ATG13	Q06628	738 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	FMP25	Q08023	583 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	GNT1	Q12096	491 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	PAF1	P38351	445 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	DSE4	P53753	1117 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	1.91	□□□□□ -2.1	not detected
SMC4	YLR086W	SPO75	Q07798	868 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-LR4	P0C2I8	440 aa	Known RBP	1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-DR6	P0CX70	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-ER1	P0CX71	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-LR2	P0CX72	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-PL	P0CX73	440 aa		1.91	□□□□□ -2.1
SMC4	YLR086W	TY1A-JR1	P0CX74	440 aa		1.91	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms