RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W CFT2Q12102 859 aaPredicted RBP5.87□□□□□ -1.47
MSH1YHR120W RLF2Q12495 606 aa5.87□□□□□ -1.47
MSH1YHR120W ERG12P07277 443 aa5.87□□□□□ -1.47
MSH1YHR120W CHS3P29465 1165 aa5.87□□□□□ -1.47
MSH1YHR120W PIL1P53252 339 aaKnown RBP5.87□□□□□ -1.47
MSH1YHR120W UFD2P54860 961 aa5.87□□□□□ -1.47
MSH1YHR120W SDH2P21801 266 aa5.86□□□□□ -1.47
MSH1YHR120W CDC60P26637 1090 aaKnown RBP5.86□□□□□ -1.47
MSH1YHR120W PRO3P32263 286 aaKnown RBP5.86□□□□□ -1.47
MSH1YHR120W YKR023WP36119 530 aaKnown RBP5.86□□□□□ -1.47
MSH1YHR120W TUS1Q06412 1307 aa5.86□□□□□ -1.47
MSH1YHR120W KNS1P32350 737 aaPredicted RBP5.86□□□□□ -1.47
MSH1YHR120W BDH2P39713 417 aa5.86□□□□□ -1.47
MSH1YHR120W YML037CQ03703 340 aa5.86□□□□□ -1.47
MSH1YHR120W UBX5Q06682 500 aa5.85□□□□□ -1.47
MSH1YHR120W SSF2Q12153 453 aaPredicted RBP5.85□□□□□ -1.47
MSH1YHR120W PER1P25625 357 aa5.85□□□□□ -1.47
MSH1YHR120W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
MSH1YHR120W MYO3P36006 1272 aa5.85□□□□□ -1.47
MSH1YHR120W VPS8P39702 1274 aa5.85□□□□□ -1.47
MSH1YHR120W FPR4Q06205 392 aaPredicted RBP5.85□□□□□ -1.47
MSH1YHR120W BRN1P38170 754 aa5.85□□□□□ -1.47
MSH1YHR120W HYR1P40581 163 aaKnown RBP5.85□□□□□ -1.47
MSH1YHR120W SAM2P19358 384 aaKnown RBP5.84□□□□□ -1.47
MSH1YHR120W RIT1P23796 513 aa5.84□□□□□ -1.47
MSH1YHR120W ANP1P32629 500 aa5.84□□□□□ -1.47
MSH1YHR120W TY3A-GQ12173 290 aa5.84□□□□□ -1.47
MSH1YHR120W TY3A-IQ99219 290 aa5.84□□□□□ -1.47
MSH1YHR120W ACE2P21192 770 aa5.84□□□□□ -1.48
MSH1YHR120W HDA1P53973 706 aa5.84□□□□□ -1.48
MSH1YHR120W SPN1Q06505 410 aaPredicted RBP5.84□□□□□ -1.48
MSH1YHR120W DIT2P21595 489 aa5.83□□□□□ -1.48
MSH1YHR120W CRG1P38892 291 aaRIP-Chip data5.83□□□□□ -1.48not detected
MSH1YHR120W ATG1P53104 897 aa5.83□□□□□ -1.48
MSH1YHR120W SOL4P53315 255 aa5.83□□□□□ -1.48
MSH1YHR120W AIM44Q99299 758 aa5.83□□□□□ -1.48
MSH1YHR120W PTK2P47116 818 aaKnown RBP5.83□□□□□ -1.48
MSH1YHR120W COG8Q04632 607 aa5.83□□□□□ -1.48
MSH1YHR120W PIB1Q06651 286 aa5.83□□□□□ -1.48
MSH1YHR120W RNR2P09938 399 aaKnown RBP5.82□□□□□ -1.48
MSH1YHR120W RER2P35196 286 aa5.82□□□□□ -1.48
MSH1YHR120W UBP9P39967 754 aa5.82□□□□□ -1.48
MSH1YHR120W HXT17P53631 564 aa5.82□□□□□ -1.48
MSH1YHR120W HST1P53685 503 aa5.82□□□□□ -1.48
MSH1YHR120W VMA2P16140 517 aaKnown RBP5.82□□□□□ -1.48
MSH1YHR120W PKC1P24583 1151 aa5.82□□□□□ -1.48
MSH1YHR120W EUG1P32474 517 aa5.82□□□□□ -1.48
MSH1YHR120W PAM1P37304 830 aaKnown RBP5.82□□□□□ -1.48
MSH1YHR120W PES4P39684 611 aa5.82□□□□□ -1.48
MSH1YHR120W FOL1P53848 824 aa5.82□□□□□ -1.48
MSH1YHR120W CIC1P38779 376 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W PSF2P40359 213 aa5.81□□□□□ -1.48
MSH1YHR120W KRE33P53914 1056 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W VPS30Q02948 557 aa5.81□□□□□ -1.48
MSH1YHR120W PGA3Q12746 312 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W RAD18P10862 487 aa5.81□□□□□ -1.48
MSH1YHR120W HXT13P39924 564 aa5.81□□□□□ -1.48
MSH1YHR120W TPM1P17536 199 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W IMP2'P32351 346 aa5.81□□□□□ -1.48
MSH1YHR120W MNN4P36044 1178 aa5.81□□□□□ -1.48
MSH1YHR120W PHO88P38264 188 aaPredicted RBP5.81□□□□□ -1.48
MSH1YHR120W GPB2P39717 880 aa5.81□□□□□ -1.48
MSH1YHR120W ALD6P54115 500 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W RPT6Q01939 405 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W ULP1Q02724 621 aa5.81□□□□□ -1.48
MSH1YHR120W MYO5Q04439 1219 aaKnown RBP5.81□□□□□ -1.48
MSH1YHR120W NUC1P08466 329 aa5.8□□□□□ -1.48
MSH1YHR120W MAK31P23059 88 aa5.8□□□□□ -1.48
MSH1YHR120W PEP3P27801 918 aa5.8□□□□□ -1.48
MSH1YHR120W RPL8BP29453 256 aaKnown RBP5.8□□□□□ -1.48
MSH1YHR120W CSM2P40465 213 aa5.8□□□□□ -1.48
MSH1YHR120W CIR1P42940 261 aa5.8□□□□□ -1.48
MSH1YHR120W NPA3P47122 385 aa5.8□□□□□ -1.48
MSH1YHR120W TFC6Q06339 672 aa5.8□□□□□ -1.48
MSH1YHR120W KEX1P09620 729 aa5.8□□□□□ -1.48
MSH1YHR120W TRL1P09880 827 aaKnown RBP5.8□□□□□ -1.48
MSH1YHR120W PAH1P32567 862 aa5.8□□□□□ -1.48
MSH1YHR120W UTR4P32626 227 aa5.8□□□□□ -1.48
MSH1YHR120W LCD1Q04377 747 aa5.8□□□□□ -1.48
MSH1YHR120W DUS4Q06063 367 aa5.8□□□□□ -1.48
MSH1YHR120W SRP54P20424 541 aaKnown RBP5.79□□□□□ -1.48
MSH1YHR120W SIS1P25294 352 aaKnown RBP5.79□□□□□ -1.48
MSH1YHR120W VPS45P38932 577 aa5.79□□□□□ -1.48
MSH1YHR120W HRQ1Q05549 1077 aa5.79□□□□□ -1.48
MSH1YHR120W ICL2Q12031 575 aa5.79□□□□□ -1.48
MSH1YHR120W SAM1P10659 382 aaKnown RBP5.79□□□□□ -1.48
MSH1YHR120W TGL1P34163 548 aa5.79□□□□□ -1.48
MSH1YHR120W YKR018CP36114 725 aa5.79□□□□□ -1.48
MSH1YHR120W YAF9P53930 226 aa5.79□□□□□ -1.48
MSH1YHR120W TMA64Q04600 565 aaKnown RBP5.79□□□□□ -1.48
MSH1YHR120W EST2Q06163 884 aa5.79□□□□□ -1.48
MSH1YHR120W SUE1Q06524 206 aa5.79□□□□□ -1.48
MSH1YHR120W CLF1Q12309 687 aaPredicted RBP5.79□□□□□ -1.48
MSH1YHR120W MAC1P35192 417 aa5.78□□□□□ -1.48
MSH1YHR120W RKM3P38222 552 aa5.78□□□□□ -1.48
MSH1YHR120W MXR1P40029 184 aa5.78□□□□□ -1.48
MSH1YHR120W UTP4Q06679 776 aaKnown RBP5.78□□□□□ -1.48
MSH1YHR120W PRE10P21242 288 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
MSH1YHR120W YGR125WP53273 1036 aa5.78□□□□□ -1.48
MSH1YHR120W CDC19P00549 500 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 64 ms