RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W ROX1P25042 368 aa13□□□□□ -0.33
SNF6YHL025W RSC30P38781 883 aa13□□□□□ -0.33
SNF6YHL025W VPS8P39702 1274 aa13□□□□□ -0.33
SNF6YHL025W PIB1Q06651 286 aa13□□□□□ -0.33
SNF6YHL025W ADP1P25371 1049 aa12.99□□□□□ -0.33
SNF6YHL025W PRO3P32263 286 aaKnown RBP12.99□□□□□ -0.33
SNF6YHL025W AKR1P39010 764 aa12.99□□□□□ -0.33
SNF6YHL025W EPL1P43572 832 aa12.99□□□□□ -0.33
SNF6YHL025W ENT3P47160 408 aa12.99□□□□□ -0.33
SNF6YHL025W HAP5Q02516 242 aa12.99□□□□□ -0.33
SNF6YHL025W COG8Q04632 607 aa12.99□□□□□ -0.33
SNF6YHL025W ISW2Q08773 1120 aa12.99□□□□□ -0.33
SNF6YHL025W SRM1P21827 482 aa12.98□□□□□ -0.33
SNF6YHL025W BMH2P34730 273 aaKnown RBP12.98□□□□□ -0.33
SNF6YHL025W MAL31P38156 614 aa12.98□□□□□ -0.33
SNF6YHL025W PES4P39684 611 aa12.98□□□□□ -0.33
SNF6YHL025W YGL081WP53156 320 aa12.98□□□□□ -0.33
SNF6YHL025W MYO5Q04439 1219 aaKnown RBP12.98□□□□□ -0.33
SNF6YHL025W KIN1P13185 1064 aa12.97□□□□□ -0.33
SNF6YHL025W CBP3P21560 335 aa12.97□□□□□ -0.33
SNF6YHL025W NIT1P40447 199 aa12.97□□□□□ -0.33
SNF6YHL025W RPT6Q01939 405 aaKnown RBP12.97□□□□□ -0.33
SNF6YHL025W RBA50Q04418 439 aa12.97□□□□□ -0.33
SNF6YHL025W SKG3Q06315 1026 aa12.97□□□□□ -0.33
SNF6YHL025W PMA1P05030 918 aaKnown RBP12.96□□□□□ -0.33
SNF6YHL025W DIT2P21595 489 aa12.96□□□□□ -0.33
SNF6YHL025W RNR3P21672 869 aaKnown RBP12.96□□□□□ -0.33
SNF6YHL025W CSM2P40465 213 aa12.96□□□□□ -0.33
SNF6YHL025W SNU71P53207 620 aaKnown RBP12.96□□□□□ -0.33
SNF6YHL025W YDL124WQ07551 312 aaKnown RBP12.96□□□□□ -0.33
SNF6YHL025W CLF1Q12309 687 aaPredicted RBP12.96□□□□□ -0.33
SNF6YHL025W KEX1P09620 729 aa12.95□□□□□ -0.34
SNF6YHL025W RAD53P22216 821 aa12.95□□□□□ -0.34
SNF6YHL025W YBL028CP38202 106 aa12.95□□□□□ -0.34
SNF6YHL025W RFC5P38251 354 aa12.95□□□□□ -0.34
SNF6YHL025W RPN10P38886 268 aaKnown RBP12.95□□□□□ -0.34
SNF6YHL025W YOR111WQ99210 232 aa12.95□□□□□ -0.34
SNF6YHL025W GAL2P13181 574 aa12.94□□□□□ -0.34
SNF6YHL025W SWI4P25302 1093 aaKnown RBP12.94□□□□□ -0.34
SNF6YHL025W CST26P38226 397 aa12.94□□□□□ -0.34
SNF6YHL025W PEX19Q07418 342 aa12.94□□□□□ -0.34
SNF6YHL025W HCA4P20448 770 aaKnown RBP12.93□□□□□ -0.34
SNF6YHL025W RPL8BP29453 256 aaKnown RBP12.93□□□□□ -0.34
SNF6YHL025W MAL33P38157 468 aa12.93□□□□□ -0.34
SNF6YHL025W AIM44Q99299 758 aa12.93□□□□□ -0.34
SNF6YHL025W PGI1P12709 554 aaKnown RBP12.92□□□□□ -0.34
SNF6YHL025W CHS3P29465 1165 aa12.92□□□□□ -0.34
SNF6YHL025W ASF1P32447 279 aa12.92□□□□□ -0.34
SNF6YHL025W ELM1P32801 640 aa12.92□□□□□ -0.34
SNF6YHL025W ARL1P38116 183 aaKnown RBP12.92□□□□□ -0.34
SNF6YHL025W CIR1P42940 261 aa12.92□□□□□ -0.34
SNF6YHL025W FOL1P53848 824 aa12.92□□□□□ -0.34
SNF6YHL025W GDE1Q02979 1223 aa12.92□□□□□ -0.34
SNF6YHL025W TUS1Q06412 1307 aa12.91□□□□□ -0.34
SNF6YHL025W HSP82P02829 709 aaKnown RBP12.91□□□□□ -0.34
SNF6YHL025W RDS1P25611 832 aa12.91□□□□□ -0.34
SNF6YHL025W RXT2P38255 430 aa12.91□□□□□ -0.34
SNF6YHL025W KEL1P38853 1164 aaKnown RBP12.91□□□□□ -0.34
SNF6YHL025W VPS30Q02948 557 aa12.91□□□□□ -0.34
SNF6YHL025W MBR1P23493 339 aa12.9□□□□□ -0.34
SNF6YHL025W FAR11P53917 953 aa12.9□□□□□ -0.34
SNF6YHL025W TUB2P02557 457 aaKnown RBP12.89□□□□□ -0.35
SNF6YHL025W ACE2P21192 770 aa12.89□□□□□ -0.35
SNF6YHL025W PAM1P37304 830 aaKnown RBP12.89□□□□□ -0.35
SNF6YHL025W TOM71P38825 639 aaKnown RBP12.89□□□□□ -0.35
SNF6YHL025W RSM25P40496 264 aa12.89□□□□□ -0.35
SNF6YHL025W PIL1P53252 339 aaKnown RBP12.89□□□□□ -0.35
SNF6YHL025W YDR341CQ05506 607 aaKnown RBP12.89□□□□□ -0.35
SNF6YHL025W NUC1P08466 329 aa12.88□□□□□ -0.35
SNF6YHL025W CLC1P17891 233 aa12.88□□□□□ -0.35
SNF6YHL025W ASH1P34233 588 aa12.88□□□□□ -0.35
SNF6YHL025W TPS3P38426 1054 aaKnown RBP12.88□□□□□ -0.35
SNF6YHL025W CCT5P40413 562 aaKnown RBP12.88□□□□□ -0.35
SNF6YHL025W PCI8P40512 444 aa12.88□□□□□ -0.35
SNF6YHL025W DSE3Q08729 430 aa12.88□□□□□ -0.35
SNF6YHL025W MET6P05694 767 aaKnown RBP12.87□□□□□ -0.35
SNF6YHL025W CDC6P09119 513 aa12.87□□□□□ -0.35
SNF6YHL025W SRP54P20424 541 aaKnown RBP12.87□□□□□ -0.35
SNF6YHL025W JIP4Q03361 876 aa12.87□□□□□ -0.35
SNF6YHL025W ETT1Q08421 412 aaKnown RBP12.87□□□□□ -0.35
SNF6YHL025W LAP2Q10740 671 aa12.87□□□□□ -0.35
SNF6YHL025W DCS2Q12123 353 aa12.87□□□□□ -0.35
SNF6YHL025W GET3Q12154 354 aaKnown RBP12.87□□□□□ -0.35
SNF6YHL025W CEX1Q12453 761 aa12.87□□□□□ -0.35
SNF6YHL025W CIT1P00890 479 aa12.86□□□□□ -0.35
SNF6YHL025W SPB4P25808 606 aaPredicted RBP12.86□□□□□ -0.35
SNF6YHL025W VPS45P38932 577 aa12.86□□□□□ -0.35
SNF6YHL025W NAF1P53919 492 aaKnown RBP12.86□□□□□ -0.35
SNF6YHL025W MDM1Q01846 1127 aa12.86□□□□□ -0.35
SNF6YHL025W GIN4Q12263 1142 aa12.86□□□□□ -0.35
SNF6YHL025W FRS2P15625 503 aaKnown RBP12.85□□□□□ -0.35
SNF6YHL025W SEC20P28791 383 aa12.85□□□□□ -0.35
SNF6YHL025W RVS167P39743 482 aaKnown RBP12.85□□□□□ -0.35
SNF6YHL025W TIF4631P39935 952 aaKnown RBP12.85□□□□□ -0.35
SNF6YHL025W UBP9P39967 754 aa12.85□□□□□ -0.35
SNF6YHL025W YGL138CP53122 345 aa12.85□□□□□ -0.35
SNF6YHL025W SGD1Q06132 899 aa12.85□□□□□ -0.35
SNF6YHL025W APC11Q12157 165 aa12.85□□□□□ -0.35
SNF6YHL025W VPS1P21576 704 aaKnown RBP12.84□□□□□ -0.35
SNF6YHL025W RFT1P38206 574 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms