RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C TY1A-JR1P0CX74 440 aa6.08□□□□□ -1.44
PRP38YGR075C TY1A-LR3P0CX75 440 aa6.08□□□□□ -1.44
PRP38YGR075C TY1A-ML2P0CX76 440 aa6.08□□□□□ -1.44
PRP38YGR075C CTH1P47976 325 aa6.08□□□□□ -1.44
PRP38YGR075C TY1A-GR1Q12085 440 aa6.08□□□□□ -1.44
PRP38YGR075C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.08□□□□□ -1.44
PRP38YGR075C TY1A-OLQ92392 440 aaKnown RBP6.08□□□□□ -1.44
PRP38YGR075C CYC7P00045 113 aa6.07□□□□□ -1.44
PRP38YGR075C MSB1P21339 1137 aaKnown RBP6.07□□□□□ -1.44
PRP38YGR075C GPT2P36148 743 aa6.07□□□□□ -1.44
PRP38YGR075C SAM37P50110 327 aa6.07□□□□□ -1.44
PRP38YGR075C UTP22P53254 1237 aaPredicted RBP6.07□□□□□ -1.44
PRP38YGR075C DOT1Q04089 582 aaKnown RBP6.07□□□□□ -1.44
PRP38YGR075C YLL054CQ12244 843 aa6.07□□□□□ -1.44
PRP38YGR075C MCM5P29496 775 aaKnown RBP6.06□□□□□ -1.44
PRP38YGR075C PUB1P32588 453 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
PRP38YGR075C MEC3Q02574 474 aa6.06□□□□□ -1.44
PRP38YGR075C LIP5P32875 414 aa6.05□□□□□ -1.44
PRP38YGR075C PPX1P38698 397 aa6.05□□□□□ -1.44
PRP38YGR075C CIC1P38779 376 aaKnown RBP6.05□□□□□ -1.44
PRP38YGR075C MAG2Q06436 670 aaKnown RBP6.05□□□□□ -1.44
PRP38YGR075C BRE4Q07660 1125 aa6.05□□□□□ -1.44
PRP38YGR075C WHI5Q12416 295 aa6.05□□□□□ -1.44
PRP38YGR075C PHO4P07270 312 aaKnown RBP6.04□□□□□ -1.44
PRP38YGR075C MET4P32389 672 aa6.04□□□□□ -1.44
PRP38YGR075C REI1P38344 393 aaPredicted RBP6.04□□□□□ -1.44
PRP38YGR075C RVS167P39743 482 aaKnown RBP6.04□□□□□ -1.44
PRP38YGR075C YCS4Q06156 1176 aa6.04□□□□□ -1.44
PRP38YGR075C ALG6Q12001 544 aaKnown RBP6.04□□□□□ -1.44
PRP38YGR075C WHI3P34761 661 aaKnown RBP6.03□□□□□ -1.44
PRP38YGR075C SEA4P38164 1038 aa6.03□□□□□ -1.44
PRP38YGR075C EXO5P38289 585 aa6.03□□□□□ -1.44
PRP38YGR075C STM1P39015 273 aaKnown RBP6.03□□□□□ -1.44
PRP38YGR075C GCD1P09032 578 aaPredicted RBP6.02□□□□□ -1.45
PRP38YGR075C MMM1P41800 426 aa6.02□□□□□ -1.45
PRP38YGR075C SDH1Q00711 640 aa6.02□□□□□ -1.45
PRP38YGR075C MSC6Q08818 692 aaKnown RBP6.02□□□□□ -1.45
PRP38YGR075C GCD6P32501 712 aaKnown RBP6.01□□□□□ -1.45
PRP38YGR075C UGA4P32837 571 aa6.01□□□□□ -1.45
PRP38YGR075C MSH4P40965 878 aaPredicted RBP6.01□□□□□ -1.45
PRP38YGR075C PRP40P33203 583 aaKnown RBP6□□□□□ -1.45
PRP38YGR075C ARL1P38116 183 aaKnown RBP6□□□□□ -1.45
PRP38YGR075C DAK2P43550 591 aa6□□□□□ -1.45
PRP38YGR075C CIT3P43635 486 aa6□□□□□ -1.45
PRP38YGR075C TOS4Q06266 489 aa6□□□□□ -1.45
PRP38YGR075C VPS35P34110 944 aa5.99□□□□□ -1.45
PRP38YGR075C NEM1P38757 446 aa5.99□□□□□ -1.45
PRP38YGR075C SLS1P42900 643 aa5.99□□□□□ -1.45
PRP38YGR075C ALT1P52893 592 aa5.99□□□□□ -1.45
PRP38YGR075C YGR045CP53229 120 aa5.99□□□□□ -1.45
PRP38YGR075C NOG1Q02892 647 aaKnown RBP5.99□□□□□ -1.45
PRP38YGR075C RPS4AP0CX35 261 aaKnown RBP5.98□□□□□ -1.45
PRP38YGR075C RPS4BP0CX36 261 aaKnown RBP5.98□□□□□ -1.45
PRP38YGR075C ELA1P53861 379 aaPredicted RBP5.98□□□□□ -1.45
PRP38YGR075C EAR1Q03212 550 aa5.98□□□□□ -1.45
PRP38YGR075C DAL4Q04895 635 aa5.98□□□□□ -1.45
PRP38YGR075C YKL077WP36081 392 aa5.97□□□□□ -1.45
PRP38YGR075C SHU2P38957 223 aa5.97□□□□□ -1.45
PRP38YGR075C IPL1P38991 367 aa5.97□□□□□ -1.45
PRP38YGR075C OYE3P41816 400 aaPredicted RBP5.97□□□□□ -1.45
PRP38YGR075C SEN54Q02825 467 aaPredicted RBP5.97□□□□□ -1.45
PRP38YGR075C MSH3P25336 1018 aa5.96□□□□□ -1.46
PRP38YGR075C SMY2P32909 740 aaKnown RBP5.96□□□□□ -1.46
PRP38YGR075C THI12P42883 340 aa5.96□□□□□ -1.46
PRP38YGR075C THI5P43534 340 aa5.96□□□□□ -1.46
PRP38YGR075C THI11P47183 340 aa5.96□□□□□ -1.46
PRP38YGR075C RCM1P53972 490 aa5.96□□□□□ -1.46
PRP38YGR075C ULP1Q02724 621 aa5.96□□□□□ -1.46
PRP38YGR075C THI13Q07748 340 aa5.96□□□□□ -1.46
PRP38YGR075C AVO1Q08236 1176 aa5.96□□□□□ -1.46
PRP38YGR075C NFS1P25374 497 aa5.95□□□□□ -1.46
PRP38YGR075C SEC20P28791 383 aa5.95□□□□□ -1.46
PRP38YGR075C AVT1P47082 602 aa5.95□□□□□ -1.46
PRP38YGR075C YOR059CQ08448 450 aaKnown RBP5.95□□□□□ -1.46
PRP38YGR075C FAA3P39002 694 aa5.94□□□□□ -1.46
PRP38YGR075C RSM26P47141 266 aa5.94□□□□□ -1.46
PRP38YGR075C PEX13P80667 386 aa5.94□□□□□ -1.46
PRP38YGR075C UTP5Q04177 643 aaKnown RBP5.94□□□□□ -1.46
PRP38YGR075C KAR2P16474 682 aaKnown RBP5.93□□□□□ -1.46
PRP38YGR075C NNK1P36003 928 aa5.93□□□□□ -1.46
PRP38YGR075C MTR4P47047 1073 aaKnown RBP5.93□□□□□ -1.46
PRP38YGR075C YVC1Q12324 675 aa5.93□□□□□ -1.46
PRP38YGR075C NSI1Q12457 570 aa5.93□□□□□ -1.46
PRP38YGR075C RPT1P33299 467 aaKnown RBP5.92□□□□□ -1.46
PRP38YGR075C SQT1P35184 431 aa5.92□□□□□ -1.46
PRP38YGR075C YAR028WP39548 234 aa5.92□□□□□ -1.46
PRP38YGR075C YPL109CQ02981 657 aa5.92□□□□□ -1.46
PRP38YGR075C HXK1P04806 485 aaKnown RBP5.91□□□□□ -1.46
PRP38YGR075C LRG1P35688 1017 aa5.91□□□□□ -1.46
PRP38YGR075C PEX28P38848 579 aa5.91□□□□□ -1.46
PRP38YGR075C XKS1P42826 600 aa5.91□□□□□ -1.46
PRP38YGR075C OXR1Q08952 273 aa5.91□□□□□ -1.46
PRP38YGR075C HEM13P11353 328 aaKnown RBP5.9□□□□□ -1.46
PRP38YGR075C VMA4P22203 233 aaKnown RBP5.9□□□□□ -1.46
PRP38YGR075C ELM1P32801 640 aa5.9□□□□□ -1.46
PRP38YGR075C RDH54P38086 958 aa5.9□□□□□ -1.46
PRP38YGR075C POL12P38121 705 aaPredicted RBP5.9□□□□□ -1.46
PRP38YGR075C IRC24P40580 263 aa5.9□□□□□ -1.46
PRP38YGR075C AOS1Q06624 347 aa5.9□□□□□ -1.46
PRP38YGR075C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms