RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C MTC1P47018 478 aaKnown RBP15.11■□□□□ 0.01
PRP38YGR075C DRS1P32892 752 aaKnown RBP14.39□□□□□ -0.11
PRP38YGR075C FAP1P53971 965 aa13.22□□□□□ -0.29
PRP38YGR075C PRI1P10363 409 aa12.56□□□□□ -0.4
PRP38YGR075C DIP2Q12220 943 aaPredicted RBP12.5□□□□□ -0.41
PRP38YGR075C AAD16Q02895 342 aa12.43□□□□□ -0.42
PRP38YGR075C ISW2Q08773 1120 aa12.43□□□□□ -0.42
PRP38YGR075C PRY3P47033 881 aa12.42□□□□□ -0.42
PRP38YGR075C RPG1P38249 964 aaKnown RBP12.29□□□□□ -0.44
PRP38YGR075C AVT3P36062 692 aa12.15□□□□□ -0.46
PRP38YGR075C BFR2Q06631 534 aaKnown RBP12.1□□□□□ -0.47
PRP38YGR075C RSE1Q04693 1361 aaKnown RBP12□□□□□ -0.49
PRP38YGR075C TSR3Q12094 313 aaKnown RBP11.88□□□□□ -0.51
PRP38YGR075C YCK3P39962 524 aa11.81□□□□□ -0.52
PRP38YGR075C HAA1Q12753 694 aaKnown RBP11.66□□□□□ -0.54
PRP38YGR075C RPL17AP05740 184 aaKnown RBP11.61□□□□□ -0.55
PRP38YGR075C RPL17BP46990 184 aaKnown RBP11.61□□□□□ -0.55
PRP38YGR075C REB1P21538 810 aa11.51□□□□□ -0.57
PRP38YGR075C MRPL32P25348 183 aa11.39□□□□□ -0.59
PRP38YGR075C SPT21P35209 758 aa11.18□□□□□ -0.62
PRP38YGR075C YKR023WP36119 530 aaKnown RBP10.96□□□□□ -0.65
PRP38YGR075C CDC27P38042 758 aa10.93□□□□□ -0.66
PRP38YGR075C TFA1P36100 482 aa10.86□□□□□ -0.67
PRP38YGR075C YGL015CP33199 130 aa10.82□□□□□ -0.68
PRP38YGR075C RIM101P33400 625 aa10.82□□□□□ -0.68
PRP38YGR075C TFC8Q12308 588 aa10.73□□□□□ -0.69
PRP38YGR075C HOP09932 586 aa10.72□□□□□ -0.69
PRP38YGR075C DCD1P06773 312 aa10.68□□□□□ -0.7
PRP38YGR075C UBP10P53874 792 aaPredicted RBP10.56□□□□□ -0.72
PRP38YGR075C MAP2P38174 421 aaKnown RBP10.54□□□□□ -0.72
PRP38YGR075C OXP1P28273 1286 aa10.48□□□□□ -0.73
PRP38YGR075C BCH2P36122 765 aa10.38□□□□□ -0.75
PRP38YGR075C SCY1P53009 804 aa10.37□□□□□ -0.75
PRP38YGR075C PTP3P40048 928 aa10.27□□□□□ -0.77
PRP38YGR075C YIL055CP40523 627 aaKnown RBP10.26□□□□□ -0.77
PRP38YGR075C SLX5P32828 619 aaKnown RBP10.21□□□□□ -0.77
PRP38YGR075C YAH1Q12184 172 aaKnown RBP10.19□□□□□ -0.78
PRP38YGR075C EPS1P40557 701 aa10.16□□□□□ -0.78
PRP38YGR075C RSM7P47150 247 aa10.14□□□□□ -0.79
PRP38YGR075C BDF1P35817 686 aa10.1□□□□□ -0.79
PRP38YGR075C TIF4632P39936 914 aaKnown RBP10.09□□□□□ -0.79
PRP38YGR075C YLR271WQ06152 274 aa10.05□□□□□ -0.8
PRP38YGR075C TGL3P40308 642 aa10.04□□□□□ -0.8
PRP38YGR075C AI2P03876 854 aa10.03□□□□□ -0.8
PRP38YGR075C BBC1P47068 1157 aa9.99□□□□□ -0.81
PRP38YGR075C SSP1P38871 571 aa9.98□□□□□ -0.81
PRP38YGR075C PSD2P53037 1138 aaKnown RBP9.88□□□□□ -0.83
PRP38YGR075C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
PRP38YGR075C BUD31P25337 157 aaPredicted RBP9.82□□□□□ -0.84
PRP38YGR075C NSR1P27476 414 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
PRP38YGR075C CST9Q06032 482 aa9.72□□□□□ -0.85
PRP38YGR075C MGA2P40578 1113 aa9.7□□□□□ -0.86
PRP38YGR075C MRM1P25270 412 aa9.69□□□□□ -0.86
PRP38YGR075C MST1P07236 462 aa9.68□□□□□ -0.86
PRP38YGR075C YOR238WQ08634 303 aa9.65□□□□□ -0.86
PRP38YGR075C YAP5P40574 245 aa9.64□□□□□ -0.87
PRP38YGR075C UBP9P39967 754 aa9.62□□□□□ -0.87
PRP38YGR075C RTG3P38165 486 aa9.49□□□□□ -0.89
PRP38YGR075C YBL029C-AQ3E756 94 aa9.49□□□□□ -0.89
PRP38YGR075C VPS29P38759 282 aa9.48□□□□□ -0.89
PRP38YGR075C RCR1P38212 213 aa9.46□□□□□ -0.9
PRP38YGR075C PIB1Q06651 286 aa9.46□□□□□ -0.9
PRP38YGR075C YMR1P47147 688 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
PRP38YGR075C GTT3P39996 337 aa9.4□□□□□ -0.9
PRP38YGR075C VNX1P42839 908 aa9.39□□□□□ -0.91
PRP38YGR075C DBP1P24784 617 aaKnown RBP9.38□□□□□ -0.91
PRP38YGR075C STS1P38637 319 aa9.38□□□□□ -0.91
PRP38YGR075C WSC3Q12215 556 aa9.38□□□□□ -0.91
PRP38YGR075C YFR006WP43590 535 aa9.36□□□□□ -0.91
PRP38YGR075C SIS1P25294 352 aaKnown RBP9.35□□□□□ -0.91
PRP38YGR075C SPP1Q03012 353 aa9.29□□□□□ -0.92
PRP38YGR075C VMA1P17255 1071 aaKnown RBP9.27□□□□□ -0.93
PRP38YGR075C RAM2P29703 316 aa9.26□□□□□ -0.93
PRP38YGR075C TIF11P38912 153 aaKnown RBP9.25□□□□□ -0.93
PRP38YGR075C YOL036WQ08206 761 aa9.22□□□□□ -0.93
PRP38YGR075C SAM3Q08986 587 aa9.21□□□□□ -0.94
PRP38YGR075C MSB4Q12317 492 aa9.2□□□□□ -0.94
PRP38YGR075C SET4P42948 560 aa9.18□□□□□ -0.94
PRP38YGR075C MAK11P20484 414 aaKnown RBP9.17□□□□□ -0.94
PRP38YGR075C ULI1P43604 169 aa9.15□□□□□ -0.94
PRP38YGR075C IOC2Q12072 812 aa9.14□□□□□ -0.95
PRP38YGR075C EAP1P36041 632 aaKnown RBP9.11□□□□□ -0.95
PRP38YGR075C FKH1P40466 484 aa9.11□□□□□ -0.95
PRP38YGR075C LDB19Q12502 818 aa9.11□□□□□ -0.95
PRP38YGR075C TRP5P00931 707 aaKnown RBP9.08□□□□□ -0.96
PRP38YGR075C MIF2P35201 549 aa9.07□□□□□ -0.96
PRP38YGR075C EDS1P38073 919 aa9.07□□□□□ -0.96
PRP38YGR075C GYP5Q12344 894 aa9.07□□□□□ -0.96
PRP38YGR075C AIR2Q12476 344 aaKnown RBP9.06□□□□□ -0.96
PRP38YGR075C COQ8P27697 501 aa9.04□□□□□ -0.96
PRP38YGR075C ABP1P15891 592 aaKnown RBP9.03□□□□□ -0.96
PRP38YGR075C PTC3P34221 468 aaKnown RBP9.01□□□□□ -0.97
PRP38YGR075C DCW1P36091 449 aa8.99□□□□□ -0.97
PRP38YGR075C RTG1P32607 177 aa8.98□□□□□ -0.97
PRP38YGR075C GRE2Q12068 342 aaKnown RBP8.98□□□□□ -0.97
PRP38YGR075C HTA1P04911 132 aaKnown RBP8.97□□□□□ -0.97
PRP38YGR075C HTA2P04912 132 aa8.97□□□□□ -0.97
PRP38YGR075C YNL035CP53962 389 aaKnown RBP8.96□□□□□ -0.98
PRP38YGR075C ATH1P48016 1211 aa8.93□□□□□ -0.98
PRP38YGR075C GUT1P32190 709 aa8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms