RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A IXR1P33417 597 aa10.76□□□□□ -0.69
LSB3YFR024C-A RER2P35196 286 aa10.76□□□□□ -0.69
LSB3YFR024C-A HXT17P53631 564 aa10.76□□□□□ -0.69
LSB3YFR024C-A CIC1P38779 376 aaKnown RBP10.75□□□□□ -0.69
LSB3YFR024C-A YJL007CP47080 104 aa10.75□□□□□ -0.69
LSB3YFR024C-A SOL4P53315 255 aa10.75□□□□□ -0.69
LSB3YFR024C-A TY3A-GQ12173 290 aa10.75□□□□□ -0.69
LSB3YFR024C-A TY3A-IQ99219 290 aa10.75□□□□□ -0.69
LSB3YFR024C-A PEP3P27801 918 aa10.74□□□□□ -0.69
LSB3YFR024C-A IMP2'P32351 346 aa10.74□□□□□ -0.69
LSB3YFR024C-A HXT13P39924 564 aa10.74□□□□□ -0.69
LSB3YFR024C-A UBX5Q06682 500 aa10.74□□□□□ -0.69
LSB3YFR024C-A CLF1Q12309 687 aaPredicted RBP10.74□□□□□ -0.69
LSB3YFR024C-A FOL1P53848 824 aa10.73□□□□□ -0.69
LSB3YFR024C-A SAM2P19358 384 aaKnown RBP10.72□□□□□ -0.69
LSB3YFR024C-A DIT2P21595 489 aa10.72□□□□□ -0.69
LSB3YFR024C-A UBP9P39967 754 aa10.72□□□□□ -0.69
LSB3YFR024C-A SPO22P40511 975 aa10.72□□□□□ -0.69
LSB3YFR024C-A RPT6Q01939 405 aaKnown RBP10.72□□□□□ -0.69
LSB3YFR024C-A VPS30Q02948 557 aa10.72□□□□□ -0.69
LSB3YFR024C-A ACE2P21192 770 aa10.71□□□□□ -0.69
LSB3YFR024C-A MAK31P23059 88 aa10.71□□□□□ -0.69
LSB3YFR024C-A RPL8BP29453 256 aaKnown RBP10.71□□□□□ -0.69
LSB3YFR024C-A SIS2P36024 562 aa10.71□□□□□ -0.69
LSB3YFR024C-A ALG2P43636 503 aa10.71□□□□□ -0.69
LSB3YFR024C-A ATG1P53104 897 aa10.71□□□□□ -0.69
LSB3YFR024C-A EST2Q06163 884 aa10.71□□□□□ -0.69
LSB3YFR024C-A TFC6Q06339 672 aa10.71□□□□□ -0.69
LSB3YFR024C-A ESF1Q06344 628 aaKnown RBP10.71□□□□□ -0.69
LSB3YFR024C-A PGA3Q12746 312 aaKnown RBP10.71□□□□□ -0.69
LSB3YFR024C-A VPS45P38932 577 aa10.7□□□□□ -0.7
LSB3YFR024C-A YAF9P53930 226 aa10.7□□□□□ -0.7
LSB3YFR024C-A HDA1P53973 706 aa10.7□□□□□ -0.7
LSB3YFR024C-A MYO5Q04439 1219 aaKnown RBP10.7□□□□□ -0.7
LSB3YFR024C-A NUC1P08466 329 aa10.69□□□□□ -0.7
LSB3YFR024C-A SRS2P12954 1174 aa10.69□□□□□ -0.7
LSB3YFR024C-A VMA2P16140 517 aaKnown RBP10.69□□□□□ -0.7
LSB3YFR024C-A PKC1P24583 1151 aa10.69□□□□□ -0.7
LSB3YFR024C-A YGL015CP33199 130 aa10.69□□□□□ -0.7
LSB3YFR024C-A YKR018CP36114 725 aa10.69□□□□□ -0.7
LSB3YFR024C-A GPB2P39717 880 aa10.69□□□□□ -0.7
LSB3YFR024C-A PTK2P47116 818 aaKnown RBP10.69□□□□□ -0.7
LSB3YFR024C-A SEC20P28791 383 aa10.68□□□□□ -0.7
LSB3YFR024C-A EUG1P32474 517 aa10.68□□□□□ -0.7
LSB3YFR024C-A ALD6P54115 500 aaKnown RBP10.68□□□□□ -0.7
LSB3YFR024C-A RAD18P10862 487 aa10.67□□□□□ -0.7
LSB3YFR024C-A PHO88P38264 188 aaPredicted RBP10.67□□□□□ -0.7
LSB3YFR024C-A AIM9P40053 627 aaKnown RBP10.67□□□□□ -0.7
LSB3YFR024C-A CSM2P40465 213 aa10.67□□□□□ -0.7
LSB3YFR024C-A RPC31P17890 251 aa10.66□□□□□ -0.7
LSB3YFR024C-A OXP1P28273 1286 aa10.66□□□□□ -0.7
LSB3YFR024C-A KRI1P42846 591 aaKnown RBP10.66□□□□□ -0.7
LSB3YFR024C-A LSB1P53281 241 aa10.65□□□□□ -0.7
LSB3YFR024C-A CDC19P00549 500 aaKnown RBP10.65□□□□□ -0.71
LSB3YFR024C-A SRP54P20424 541 aaKnown RBP10.65□□□□□ -0.71
LSB3YFR024C-A RNR3P21672 869 aaKnown RBP10.65□□□□□ -0.71
LSB3YFR024C-A SDH2P21801 266 aa10.65□□□□□ -0.71
LSB3YFR024C-A MAL31P38156 614 aa10.65□□□□□ -0.71
LSB3YFR024C-A PSF2P40359 213 aa10.65□□□□□ -0.71
LSB3YFR024C-A TRL1P09880 827 aaKnown RBP10.64□□□□□ -0.71
LSB3YFR024C-A MXR1P40029 184 aa10.64□□□□□ -0.71
LSB3YFR024C-A YGR125WP53273 1036 aa10.64□□□□□ -0.71
LSB3YFR024C-A MDM1Q01846 1127 aa10.64□□□□□ -0.71
LSB3YFR024C-A ECM23Q02710 187 aa10.64□□□□□ -0.71
LSB3YFR024C-A UTP4Q06679 776 aaKnown RBP10.64□□□□□ -0.71
LSB3YFR024C-A ICL2Q12031 575 aa10.64□□□□□ -0.71
LSB3YFR024C-A YOR111WQ99210 232 aa10.64□□□□□ -0.71
LSB3YFR024C-A SAM1P10659 382 aaKnown RBP10.63□□□□□ -0.71
LSB3YFR024C-A FBP26P32604 452 aa10.63□□□□□ -0.71
LSB3YFR024C-A UTR4P32626 227 aa10.63□□□□□ -0.71
LSB3YFR024C-A TGL1P34163 548 aa10.63□□□□□ -0.71
LSB3YFR024C-A TOM71P38825 639 aaKnown RBP10.63□□□□□ -0.71
LSB3YFR024C-A CSC1Q06538 782 aa10.63□□□□□ -0.71
LSB3YFR024C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data10.63□□□□□ -0.71not detected
LSB3YFR024C-A MYO1P08964 1928 aa10.62□□□□□ -0.71
LSB3YFR024C-A RNR2P09938 399 aaKnown RBP10.62□□□□□ -0.71
LSB3YFR024C-A VID28P40547 921 aa10.62□□□□□ -0.71
LSB3YFR024C-A SPH1Q06160 661 aa10.62□□□□□ -0.71
LSB3YFR024C-A SUE1Q06524 206 aa10.62□□□□□ -0.71
LSB3YFR024C-A MET7Q08645 548 aa10.62□□□□□ -0.71
LSB3YFR024C-A DSE3Q08729 430 aa10.62□□□□□ -0.71
LSB3YFR024C-A PAH1P32567 862 aa10.61□□□□□ -0.71
LSB3YFR024C-A TPM2P40414 161 aa10.61□□□□□ -0.71
LSB3YFR024C-A YKE2P52553 114 aa10.61□□□□□ -0.71
LSB3YFR024C-A TMA64Q04600 565 aaKnown RBP10.61□□□□□ -0.71
LSB3YFR024C-A DUS4Q06063 367 aa10.61□□□□□ -0.71
LSB3YFR024C-A MATALPHA2P0CY08 210 aa10.6□□□□□ -0.71
LSB3YFR024C-A HMLALPHA2P0CY09 210 aa10.6□□□□□ -0.71
LSB3YFR024C-A PRE10P21242 288 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
LSB3YFR024C-A RGT1P32862 1170 aa10.6□□□□□ -0.71
LSB3YFR024C-A AKR1P39010 764 aa10.6□□□□□ -0.71
LSB3YFR024C-A UBP10P53874 792 aaPredicted RBP10.6□□□□□ -0.71
LSB3YFR024C-A ARP5P53946 755 aa10.6□□□□□ -0.71
LSB3YFR024C-A VIP1Q06685 1146 aaKnown RBP10.6□□□□□ -0.71
LSB3YFR024C-A GUD1Q07729 489 aa10.6□□□□□ -0.71
LSB3YFR024C-A CIT1P00890 479 aa10.59□□□□□ -0.71
LSB3YFR024C-A RPL8AP17076 256 aaKnown RBP10.59□□□□□ -0.71
LSB3YFR024C-A SRP40P32583 406 aaPredicted RBP10.59□□□□□ -0.71
LSB3YFR024C-A OPY1P38271 328 aa10.59□□□□□ -0.71
LSB3YFR024C-A ULP1Q02724 621 aa10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms