RNA–Protein interactions for RNA: YCL028W

RNQ1, Transcript of [PIN(+)] prion, yeastyeast

Gene RNQ1, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNQ1YCL028W HCA4P20448 770 aaKnown RBP12.83□□□□□ -0.36
RNQ1YCL028W MAL31P38156 614 aa12.83□□□□□ -0.36
RNQ1YCL028W TPS3P38426 1054 aaKnown RBP12.83□□□□□ -0.36
RNQ1YCL028W PEX14P53112 341 aa12.83□□□□□ -0.36
RNQ1YCL028W MYO5Q04439 1219 aaKnown RBP12.83□□□□□ -0.36
RNQ1YCL028W YLR407WQ06070 228 aa12.83□□□□□ -0.36
RNQ1YCL028W SKG3Q06315 1026 aa12.83□□□□□ -0.36
RNQ1YCL028W TUB2P02557 457 aaKnown RBP12.82□□□□□ -0.36
RNQ1YCL028W RPL8BP29453 256 aaKnown RBP12.82□□□□□ -0.36
RNQ1YCL028W CHS3P29465 1165 aa12.82□□□□□ -0.36
RNQ1YCL028W PRX1P34227 261 aaKnown RBP12.82□□□□□ -0.36
RNQ1YCL028W VHR2P40041 505 aa12.82□□□□□ -0.36
RNQ1YCL028W PEA2P40091 420 aa12.82□□□□□ -0.36
RNQ1YCL028W HRQ1Q05549 1077 aa12.82□□□□□ -0.36
RNQ1YCL028W YOR111WQ99210 232 aa12.82□□□□□ -0.36
RNQ1YCL028W CPA2P03965 1118 aaKnown RBP12.81□□□□□ -0.36
RNQ1YCL028W PEX21P50091 288 aa12.81□□□□□ -0.36
RNQ1YCL028W FOL1P53848 824 aa12.81□□□□□ -0.36
RNQ1YCL028W CWC15Q03772 175 aaKnown RBP12.81□□□□□ -0.36
RNQ1YCL028W LAP2Q10740 671 aa12.81□□□□□ -0.36
RNQ1YCL028W CSR2Q12734 1121 aa12.81□□□□□ -0.36
RNQ1YCL028W BMH2P34730 273 aaKnown RBP12.8□□□□□ -0.36
RNQ1YCL028W RPN10P38886 268 aaKnown RBP12.8□□□□□ -0.36
RNQ1YCL028W BDH2P39713 417 aa12.8□□□□□ -0.36
RNQ1YCL028W YPL150WQ12152 901 aa12.8□□□□□ -0.36
RNQ1YCL028W CLF1Q12309 687 aaPredicted RBP12.8□□□□□ -0.36
RNQ1YCL028W RNR3P21672 869 aaKnown RBP12.79□□□□□ -0.36
RNQ1YCL028W SWI4P25302 1093 aaKnown RBP12.79□□□□□ -0.36
RNQ1YCL028W RFC5P38251 354 aa12.79□□□□□ -0.36
RNQ1YCL028W PES4P39684 611 aa12.79□□□□□ -0.36
RNQ1YCL028W VPS30Q02948 557 aa12.79□□□□□ -0.36
RNQ1YCL028W DIT2P21595 489 aa12.78□□□□□ -0.36
RNQ1YCL028W HST1P53685 503 aa12.78□□□□□ -0.36
RNQ1YCL028W HSP82P02829 709 aaKnown RBP12.77□□□□□ -0.37
RNQ1YCL028W NUC1P08466 329 aa12.77□□□□□ -0.37
RNQ1YCL028W CBP3P21560 335 aa12.77□□□□□ -0.37
RNQ1YCL028W ACA1P39970 489 aa12.77□□□□□ -0.37
RNQ1YCL028W GSC2P40989 1895 aa12.76□□□□□ -0.37
RNQ1YCL028W SAM2P19358 384 aaKnown RBP12.76□□□□□ -0.37
RNQ1YCL028W MSP1P28737 362 aa12.76□□□□□ -0.37
RNQ1YCL028W VPS45P38932 577 aa12.76□□□□□ -0.37
RNQ1YCL028W GDE1Q02979 1223 aa12.76□□□□□ -0.37
RNQ1YCL028W COG8Q04632 607 aa12.76□□□□□ -0.37
RNQ1YCL028W YDR341CQ05506 607 aaKnown RBP12.76□□□□□ -0.37
RNQ1YCL028W SSA4P22202 642 aaKnown RBP12.75□□□□□ -0.37
RNQ1YCL028W OXP1P28273 1286 aa12.75□□□□□ -0.37
RNQ1YCL028W MAL33P38157 468 aa12.75□□□□□ -0.37
RNQ1YCL028W RXT2P38255 430 aa12.75□□□□□ -0.37
RNQ1YCL028W PNT1P38969 423 aa12.75□□□□□ -0.37
RNQ1YCL028W UBP9P39967 754 aa12.75□□□□□ -0.37
RNQ1YCL028W MDM1Q01846 1127 aa12.75□□□□□ -0.37
RNQ1YCL028W TUS1Q06412 1307 aa12.75□□□□□ -0.37
RNQ1YCL028W CIT1P00890 479 aa12.74□□□□□ -0.37
RNQ1YCL028W MET6P05694 767 aaKnown RBP12.74□□□□□ -0.37
RNQ1YCL028W ERG12P07277 443 aa12.74□□□□□ -0.37
RNQ1YCL028W KRS1P15180 591 aaKnown RBP12.74□□□□□ -0.37
RNQ1YCL028W SRP54P20424 541 aaKnown RBP12.74□□□□□ -0.37
RNQ1YCL028W RDS1P25611 832 aa12.74□□□□□ -0.37
RNQ1YCL028W TIF4631P39935 952 aaKnown RBP12.74□□□□□ -0.37
RNQ1YCL028W PCI8P40512 444 aa12.74□□□□□ -0.37
RNQ1YCL028W PIL1P53252 339 aaKnown RBP12.74□□□□□ -0.37
RNQ1YCL028W PEX19Q07418 342 aa12.74□□□□□ -0.37
RNQ1YCL028W GIN4Q12263 1142 aa12.74□□□□□ -0.37
RNQ1YCL028W SPB4P25808 606 aaPredicted RBP12.73□□□□□ -0.37
RNQ1YCL028W TOM71P38825 639 aaKnown RBP12.73□□□□□ -0.37
RNQ1YCL028W YIL089WP40500 205 aa12.73□□□□□ -0.37
RNQ1YCL028W HYR1P40581 163 aaKnown RBP12.73□□□□□ -0.37
RNQ1YCL028W HAP5Q02516 242 aa12.73□□□□□ -0.37
RNQ1YCL028W DSE3Q08729 430 aa12.73□□□□□ -0.37
RNQ1YCL028W CDC6P09119 513 aa12.72□□□□□ -0.37
RNQ1YCL028W RRT6P53117 311 aaPredicted RBP12.72□□□□□ -0.37
RNQ1YCL028W PEX29Q03370 554 aa12.72□□□□□ -0.37
RNQ1YCL028W PGI1P12709 554 aaKnown RBP12.71□□□□□ -0.37
RNQ1YCL028W STI1P15705 589 aaKnown RBP RIP-Chip data12.71□□□□□ -0.37not detected
RNQ1YCL028W VPS1P21576 704 aaKnown RBP12.71□□□□□ -0.37
RNQ1YCL028W KEX1P09620 729 aa12.7□□□□□ -0.38
RNQ1YCL028W ROX1P25042 368 aa12.7□□□□□ -0.38
RNQ1YCL028W SNF7P39929 240 aaKnown RBP12.7□□□□□ -0.38
RNQ1YCL028W SOL4P53315 255 aa12.7□□□□□ -0.38
RNQ1YCL028W GIS4Q04233 774 aa12.7□□□□□ -0.38
RNQ1YCL028W SUB2Q07478 446 aaKnown RBP12.7□□□□□ -0.38
RNQ1YCL028W MBR1P23493 339 aa12.69□□□□□ -0.38
RNQ1YCL028W SEC20P28791 383 aa12.69□□□□□ -0.38
RNQ1YCL028W CIR1P42940 261 aa12.69□□□□□ -0.38
RNQ1YCL028W SUE1Q06524 206 aa12.69□□□□□ -0.38
RNQ1YCL028W DCS2Q12123 353 aa12.69□□□□□ -0.38
RNQ1YCL028W GET3Q12154 354 aaKnown RBP12.69□□□□□ -0.38
RNQ1YCL028W CEX1Q12453 761 aa12.69□□□□□ -0.38
RNQ1YCL028W ASF1P32447 279 aa12.68□□□□□ -0.38
RNQ1YCL028W OCT1P35999 772 aa12.68□□□□□ -0.38
RNQ1YCL028W TPM2P40414 161 aa12.68□□□□□ -0.38
RNQ1YCL028W YGL138CP53122 345 aa12.68□□□□□ -0.38
RNQ1YCL028W LSB1P53281 241 aa12.68□□□□□ -0.38
RNQ1YCL028W NAF1P53919 492 aaKnown RBP12.68□□□□□ -0.38
RNQ1YCL028W CSC1Q06538 782 aa12.68□□□□□ -0.38
RNQ1YCL028W UTP4Q06679 776 aaKnown RBP12.68□□□□□ -0.38
RNQ1YCL028W NBL1Q3E7Y6 73 aa12.68□□□□□ -0.38
RNQ1YCL028W MAK11P20484 414 aaKnown RBP12.67□□□□□ -0.38
RNQ1YCL028W ARL1P38116 183 aaKnown RBP12.67□□□□□ -0.38
RNQ1YCL028W CCT5P40413 562 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms