RNA–Protein interactions for RNA: YBR041W

FAT1, Transcript of Very long chain fatty acyl-CoA synthetase and fatty acid transporter, yeast

Gene FAT1, Length 2,010 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAT1	YBR041W	BOI1	P38041	980 aa	Known RBP	4.28	□□□□□ -1.73
FAT1	YBR041W	YAP5	P40574	245 aa		4.28	□□□□□ -1.73
FAT1	YBR041W	CEP3	P40969	608 aa		4.28	□□□□□ -1.73
FAT1	YBR041W	HDA1	P53973	706 aa		4.28	□□□□□ -1.73
FAT1	YBR041W	UFD2	P54860	961 aa		4.28	□□□□□ -1.73
FAT1	YBR041W	HOS3	Q02959	697 aa	Known RBP	4.28	□□□□□ -1.73
FAT1	YBR041W	WAR1	Q03631	944 aa		4.28	□□□□□ -1.73
FAT1	YBR041W	MYO5	Q04439	1219 aa	Known RBP	4.28	□□□□□ -1.73
FAT1	YBR041W	TOP1	P04786	769 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	RNR3	P21672	869 aa	Known RBP	4.27	□□□□□ -1.73
FAT1	YBR041W	UBP1	P25037	809 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	RXT2	P38255	430 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	YFH7	P43591	353 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	ALD2	P47771	506 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	RPT4	P53549	437 aa	Known RBP	4.27	□□□□□ -1.73
FAT1	YBR041W	GDE1	Q02979	1223 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	IRC4	Q03036	179 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	RIX7	Q07844	837 aa	Known RBP	4.27	□□□□□ -1.73
FAT1	YBR041W	WSC3	Q12215	556 aa		4.27	□□□□□ -1.73
FAT1	YBR041W	HSP82	P02829	709 aa	Known RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	KIN1	P13185	1064 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	VPS1	P21576	704 aa	Known RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	PTK1	P36002	662 aa	Predicted RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	RRP8	P38961	392 aa	Known RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	TPM2	P40414	161 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	PTK2	P47116	818 aa	Known RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	STR2	P47164	639 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	NAF1	P53919	492 aa	Known RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	FKS1	P38631	1876 aa	Known RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	PET111	P08468	800 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	PHO13	P19881	312 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	MAK31	P23059	88 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	MAL31	P38156	614 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	PFF1	P38244	976 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	CSM2	P40465	213 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	LYS4	P49367	693 aa	Predicted RBP	4.26	□□□□□ -1.73
FAT1	YBR041W	YGL138C	P53122	345 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	VPS75	P53853	264 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	CTI6	Q08923	506 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	CEX1	Q12453	761 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	PTC5	Q12511	572 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	RAD61	Q99359	647 aa		4.26	□□□□□ -1.73
FAT1	YBR041W	ALG1	P16661	449 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	RGP1	P16664	663 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	STE11	P23561	717 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	FRD1	P32614	470 aa	Known RBP	4.25	□□□□□ -1.73
FAT1	YBR041W	TCD1	P38756	429 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	GTT3	P39996	337 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	PCI8	P40512	444 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	DAK2	P43550	591 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	ALG2	P43636	503 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	SNU71	P53207	620 aa	Known RBP	4.25	□□□□□ -1.73
FAT1	YBR041W	SPP1	Q03012	353 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	ERO1	Q03103	563 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	TOS4	Q06266	489 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	YOR111W	Q99210	232 aa		4.25	□□□□□ -1.73
FAT1	YBR041W	SSA2	P10592	639 aa	Known RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	HIR1	P32479	840 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	MNR2	P35724	969 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	BCD1	P38772	366 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	CCC2	P38995	1004 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	MSH4	P40965	878 aa	Predicted RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	COG4	Q06096	861 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	MMR1	Q06324	491 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	TMA16	Q08687	178 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	WRS1	Q12109	432 aa	Known RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	HCA4	P20448	770 aa	Known RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	GLN1	P32288	370 aa	Known RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	ADE17	P38009	592 aa	Known RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	VPS70	P47161	811 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	VMS1	Q04311	632 aa	Known RBP	4.24	□□□□□ -1.73
FAT1	YBR041W	YCG1	Q06680	1035 aa		4.24	□□□□□ -1.73
FAT1	YBR041W	MET6	P05694	767 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	PRO3	P32263	286 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	RPT3	P33298	428 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	TOM71	P38825	639 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	PES4	P39684	611 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	NOC2	P39744	710 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	MGA2	P40578	1113 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	THI6	P41835	540 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
FAT1	YBR041W	YGR153W	P48238	217 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	PIP2	P52960	996 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	NSG2	P53898	299 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	SAS4	Q04003	481 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	GFD1	Q04839	188 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	MRD1	Q06106	887 aa	Known RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	IRC3	Q06683	689 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	YOR296W	Q08748	1289 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	YPL260W	Q08977	551 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	TIP41	Q12199	356 aa		4.23	□□□□□ -1.73
FAT1	YBR041W	CLF1	Q12309	687 aa	Predicted RBP	4.23	□□□□□ -1.73
FAT1	YBR041W	ARG82	P07250	355 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	SRP54	P20424	541 aa	Known RBP	4.22	□□□□□ -1.73
FAT1	YBR041W	SPO11	P23179	398 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	RIT1	P23796	513 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	ERT1	P38140	529 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	BRL1	P38770	471 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	LYS14	P40971	790 aa		4.22	□□□□□ -1.73
FAT1	YBR041W	SET4	P42948	560 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms