RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Ccdc171E9Q1U1 1324 aa14.16□□□□□ -0.14
Lig1-211ENSMUST00000177588 Znf541Q0GGX2 1363 aa14.16□□□□□ -0.14
Lig1-211ENSMUST00000177588 KnstrnQ9D9Z1 312 aaKnown RBP14.16□□□□□ -0.14
Lig1-211ENSMUST00000177588 Dip2aQ8BWT5 1523 aa14.15□□□□□ -0.14
Lig1-211ENSMUST00000177588 GphnQ8BUV3 769 aaKnown RBP14.15□□□□□ -0.14
Lig1-211ENSMUST00000177588 Plcb2A3KGF7 1181 aa14.15□□□□□ -0.14
Lig1-211ENSMUST00000177588 PaskQ8CEE6 1383 aa14.15□□□□□ -0.14
Lig1-211ENSMUST00000177588 4930407I10RikD3Z5T8 1512 aa14.14□□□□□ -0.15
Lig1-211ENSMUST00000177588 Pik3r4Q8VD65 1358 aa14.14□□□□□ -0.15
Lig1-211ENSMUST00000177588 Rangap1P46061 589 aaKnown RBP14.14□□□□□ -0.15
Lig1-211ENSMUST00000177588 G3bp1P97855 465 aaKnown RBP14.14□□□□□ -0.15
Lig1-211ENSMUST00000177588 Isy1Q69ZQ2 285 aaKnown RBP14.13□□□□□ -0.15
Lig1-211ENSMUST00000177588 Gemin5Q8BX17 1502 aaKnown RBP14.13□□□□□ -0.15
Lig1-211ENSMUST00000177588 Ncapd2Q8K2Z4 1392 aa14.13□□□□□ -0.15
Lig1-211ENSMUST00000177588 Rfx1P48377 963 aa14.13□□□□□ -0.15
Lig1-211ENSMUST00000177588 Rsph3aQ3UFY4 516 aa14.12□□□□□ -0.15
Lig1-211ENSMUST00000177588 Paxip1Q6NZQ4 1056 aa14.12□□□□□ -0.15
Lig1-211ENSMUST00000177588 Nutm1Q8BHP2 1126 aa14.12□□□□□ -0.15
Lig1-211ENSMUST00000177588 PzpQ61838 1495 aa14.12□□□□□ -0.15
Lig1-211ENSMUST00000177588 Aplp1Q03157 653 aa14.12□□□□□ -0.15
Lig1-211ENSMUST00000177588 Dip2bQ3UH60 1574 aa14.12□□□□□ -0.15
Lig1-211ENSMUST00000177588 Abca14E9Q8F8 1683 aa14.11□□□□□ -0.15
Lig1-211ENSMUST00000177588 Wwc1Q5SXA9 1104 aa14.11□□□□□ -0.15
Lig1-211ENSMUST00000177588 NinlQ6ZQ12 1394 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Wdr63B2RY71 923 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Spef2Q8C9J3 1734 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Q4VA45 678 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Aldh1l1Q8R0Y6 902 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Atp7bQ64446 1462 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Map3k19E9Q3S4 1311 aa14.09□□□□□ -0.15
Lig1-211ENSMUST00000177588 Kdm4cQ8VCD7 1054 aa14.08□□□□□ -0.15
Lig1-211ENSMUST00000177588 Swt1Q9DBQ9 907 aa14.08□□□□□ -0.15
Lig1-211ENSMUST00000177588 Nectin2P32507 530 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 LifrP42703 1092 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Znf692Q3U381 531 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Q3UPC7 1272 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Plekhm2Q80TQ5 1018 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 NgefQ8CHT1 710 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Cetn4Q8K4K1 168 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Tfip11Q9ERA6 838 aaKnown RBP14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Nsd3Q6P2L6 1439 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Nwd1A6H603 1563 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Q3UJC8 639 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Tmco5bQ80X59 307 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 MvpQ9EQK5 861 aa14.08□□□□□ -0.16
Lig1-211ENSMUST00000177588 Slit3Q9WVB4 1523 aa14.07□□□□□ -0.16
Lig1-211ENSMUST00000177588 Tbc1d9Q3UYK3 1264 aa14.07□□□□□ -0.16
Lig1-211ENSMUST00000177588 Mdc1Q5PSV9 1707 aa14.07□□□□□ -0.16
Lig1-211ENSMUST00000177588 NktrP30415 1453 aa14.07□□□□□ -0.16
Lig1-211ENSMUST00000177588 Slc12a5Q91V14 1138 aa14.07□□□□□ -0.16
Lig1-211ENSMUST00000177588 Kif1aP33173 1695 aa14.06□□□□□ -0.16
Lig1-211ENSMUST00000177588 Fchsd2Q3USJ8 740 aa14.06□□□□□ -0.16
Lig1-211ENSMUST00000177588 Vamp4O70480 141 aa14.05□□□□□ -0.16
Lig1-211ENSMUST00000177588 PalmQ9Z0P4 383 aa14.05□□□□□ -0.16
Lig1-211ENSMUST00000177588 Ankrd44B2RXR6 993 aa14.05□□□□□ -0.16
Lig1-211ENSMUST00000177588 SlkO54988 1233 aa14.05□□□□□ -0.16
Lig1-211ENSMUST00000177588 Idi2Q8BFZ6 227 aa14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 GorabQ8BRM2 368 aa14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 Cdc37l1Q9CZP7 335 aa14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 Nek4Q9Z1J2 792 aa14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 Sox12Q04890 314 aa14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 Dmrtc1Q9D9R7 182 aa14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 CarsQ9ER72 831 aaKnown RBP14.04□□□□□ -0.16
Lig1-211ENSMUST00000177588 Bcl9Q9D219 1425 aa14.03□□□□□ -0.16
Lig1-211ENSMUST00000177588 Rrp12Q6P5B0 1295 aaKnown RBP14.03□□□□□ -0.16
Lig1-211ENSMUST00000177588 DekQ7TNV0 380 aaKnown RBP14.03□□□□□ -0.16
Lig1-211ENSMUST00000177588 Chmp4bQ9D8B3 224 aaKnown RBP14.03□□□□□ -0.16
Lig1-211ENSMUST00000177588 Trim44Q9QXA7 346 aa14.03□□□□□ -0.16
Lig1-211ENSMUST00000177588 Birc3O08863 600 aa14.02□□□□□ -0.16
Lig1-211ENSMUST00000177588 Trim28Q62318 834 aa14.02□□□□□ -0.16
Lig1-211ENSMUST00000177588 Cps1Q8C196 1500 aa14.01□□□□□ -0.17
Lig1-211ENSMUST00000177588 Trim27Q62158 513 aa14.01□□□□□ -0.17
Lig1-211ENSMUST00000177588 DmtnQ9WV69 405 aa14.01□□□□□ -0.17
Lig1-211ENSMUST00000177588 CatipB9EKE5 520 aa14□□□□□ -0.17
Lig1-211ENSMUST00000177588 EngaseQ8BX80 734 aa14□□□□□ -0.17
Lig1-211ENSMUST00000177588 Ecm2Q5FW85 670 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 1700010I14RikQ7TPG0 532 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 PogkQ80TC5 607 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 Tmx3Q8BXZ1 456 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 Bloc1s4Q8VED2 215 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 Gm10563F6WIE4 79 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 Casq1O09165 405 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 CenppQ9CZ92 286 aa13.99□□□□□ -0.17
Lig1-211ENSMUST00000177588 Gnai1B2RSH2 354 aa13.98□□□□□ -0.17
Lig1-211ENSMUST00000177588 Bag4Q8CI61 457 aa13.98□□□□□ -0.17
Lig1-211ENSMUST00000177588 Gnai3Q9DC51 354 aa13.98□□□□□ -0.17
Lig1-211ENSMUST00000177588 Tmem94Q7TSH8 1360 aa13.98□□□□□ -0.17
Lig1-211ENSMUST00000177588 Alpk3Q924C5 1678 aa13.98□□□□□ -0.17
Lig1-211ENSMUST00000177588 Cgnl1Q6AW69 1298 aa13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 Ddrgk1Q80WW9 315 aa13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 Aldh8a1Q8BH00 487 aa13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 Anapc15-psA0A140T8L6 141 aa13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 Rtn4Q99P72 1162 aaKnown RBP13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 Pik3c2bE9QAN8 1632 aa13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 PtpruB1AUH1 1446 aa13.97□□□□□ -0.17
Lig1-211ENSMUST00000177588 Sirt1Q923E4 737 aa13.96□□□□□ -0.17
Lig1-211ENSMUST00000177588 Topaz1E5FYH1 1653 aa13.96□□□□□ -0.18
Lig1-211ENSMUST00000177588 Idi1P58044 227 aa13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Cavin2Q63918 418 aaKnown RBP13.95□□□□□ -0.18
Lig1-211ENSMUST00000177588 Senp3Q9EP97 568 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms