RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 NischQ80TM9 1593 aa21.69■■□□□ 1.06
Lig1-211ENSMUST00000177588 Gm35339A0A140LHH9 1649 aa21.61■■□□□ 1.05
Lig1-211ENSMUST00000177588 Abcc9P70170 1546 aa20.99■□□□□ 0.95
Lig1-211ENSMUST00000177588 Abcc8B2RUS7 1588 aa20.7■□□□□ 0.9
Lig1-211ENSMUST00000177588 Rtl1Q7M732 1744 aa19.89■□□□□ 0.78
Lig1-211ENSMUST00000177588 Rhox8Q6VSS7 320 aa19.85■□□□□ 0.77
Lig1-211ENSMUST00000177588 Ccdc180J3QNE4 1664 aa19.54■□□□□ 0.72
Lig1-211ENSMUST00000177588 ScribQ80U72 1612 aa19.5■□□□□ 0.71
Lig1-211ENSMUST00000177588 Dcaf1Q80TR8 1506 aa19.33■□□□□ 0.68
Lig1-211ENSMUST00000177588 Rpgrip1Q9EPQ2 1331 aa19.12■□□□□ 0.65
Lig1-211ENSMUST00000177588 Kdm5dQ62240 1548 aa19.08■□□□□ 0.65
Lig1-211ENSMUST00000177588 Zcchc6Q5BLK4 1491 aaKnown RBP19.03■□□□□ 0.64
Lig1-211ENSMUST00000177588 NacadQ5SWP3 1504 aa19.01■□□□□ 0.63
Lig1-211ENSMUST00000177588 Rb1cc1Q9ESK9 1588 aa18.97■□□□□ 0.63
Lig1-211ENSMUST00000177588 Baz1aO88379 1555 aa18.72■□□□□ 0.59
Lig1-211ENSMUST00000177588 Acin1Q9JIX8 1338 aaKnown RBP18.69■□□□□ 0.58
Lig1-211ENSMUST00000177588 Sycp2Q9CUU3 1500 aa18.6■□□□□ 0.57
Lig1-211ENSMUST00000177588 HrcG5E8J6 738 aa18.53■□□□□ 0.56
Lig1-211ENSMUST00000177588 Crybg2B7ZCC2 1516 aa18.48■□□□□ 0.55
Lig1-211ENSMUST00000177588 Ccdc136Q3TVA9 1136 aa18.45■□□□□ 0.54
Lig1-211ENSMUST00000177588 Ehmt2Q9Z148 1263 aaKnown RBP18.36■□□□□ 0.53
Lig1-211ENSMUST00000177588 Smarca2Q6DIC0 1577 aa18.23■□□□□ 0.51
Lig1-211ENSMUST00000177588 BicraF8VPZ9 1578 aa18.22■□□□□ 0.51
Lig1-211ENSMUST00000177588 Pcgf6Q99NA9 353 aa18.12■□□□□ 0.49
Lig1-211ENSMUST00000177588 Trim41Q5NCC3 630 aa18.05■□□□□ 0.48
Lig1-211ENSMUST00000177588 Cecr2E9Q2Z1 1453 aa17.99■□□□□ 0.47
Lig1-211ENSMUST00000177588 Cep164Q5DU05 1446 aa17.89■□□□□ 0.45
Lig1-211ENSMUST00000177588 Brd4Q9ESU6 1400 aaKnown RBP17.85■□□□□ 0.45
Lig1-211ENSMUST00000177588 Supt5hO55201 1082 aaKnown RBP17.72■□□□□ 0.43
Lig1-211ENSMUST00000177588 Synj1Q8CHC4 1574 aa17.71■□□□□ 0.43
Lig1-211ENSMUST00000177588 Smarca4Q3TKT4 1613 aaKnown RBP17.7■□□□□ 0.42
Lig1-211ENSMUST00000177588 Esf1Q3V1V3 845 aaKnown RBP17.69■□□□□ 0.42
Lig1-211ENSMUST00000177588 Cngb1E1AZ71 1325 aa17.69■□□□□ 0.42
Lig1-211ENSMUST00000177588 CftrP26361 1476 aa17.67■□□□□ 0.42
Lig1-211ENSMUST00000177588 Pds5bQ4VA53 1446 aaKnown RBP17.59■□□□□ 0.41
Lig1-211ENSMUST00000177588 Atad2bE9Q166 1460 aaKnown RBP17.57■□□□□ 0.4
Lig1-211ENSMUST00000177588 Cttnbp2B9EJA2 1648 aa17.55■□□□□ 0.4
Lig1-211ENSMUST00000177588 Rsf1E9PWW9 1441 aaKnown RBP17.53■□□□□ 0.4
Lig1-211ENSMUST00000177588 Iqgap2Q3UQ44 1575 aa17.52■□□□□ 0.4
Lig1-211ENSMUST00000177588 Golga3P55937 1487 aa17.5■□□□□ 0.39
Lig1-211ENSMUST00000177588 Chic1Q8CBW7 227 aa17.48■□□□□ 0.39
Lig1-211ENSMUST00000177588 Top2bQ64511 1612 aa17.47■□□□□ 0.39
Lig1-211ENSMUST00000177588 Neurod1Q60867 357 aa17.42■□□□□ 0.38
Lig1-211ENSMUST00000177588 Gab3Q8BSM5 595 aa17.38■□□□□ 0.37
Lig1-211ENSMUST00000177588 NefmP08553 848 aa17.38■□□□□ 0.37
Lig1-211ENSMUST00000177588 Ccdc88bQ4QRL3 1481 aa17.36■□□□□ 0.37
Lig1-211ENSMUST00000177588 Zeb1Q64318 1117 aa17.34■□□□□ 0.37
Lig1-211ENSMUST00000177588 Mier1Q5UAK0 511 aa17.32■□□□□ 0.36
Lig1-211ENSMUST00000177588 Ercc6F8VPZ5 1481 aa17.27■□□□□ 0.36
Lig1-211ENSMUST00000177588 Frmpd1A2AKB4 1549 aa17.25■□□□□ 0.35
Lig1-211ENSMUST00000177588 Wdr62Q3U3T8 1523 aa17.22■□□□□ 0.35
Lig1-211ENSMUST00000177588 Sall2Q9QX96 1004 aa17.19■□□□□ 0.34
Lig1-211ENSMUST00000177588 Cc2d2aQ8CFW7 1633 aa17.16■□□□□ 0.34
Lig1-211ENSMUST00000177588 Fmn1Q05860 1466 aa17.11■□□□□ 0.33
Lig1-211ENSMUST00000177588 Las1lA2BE28 776 aaKnown RBP17.09■□□□□ 0.33
Lig1-211ENSMUST00000177588 Thoc2B1AZI6 1594 aaKnown RBP17.06■□□□□ 0.32
Lig1-211ENSMUST00000177588 Kif15Q6P9L6 1387 aa17.01■□□□□ 0.31
Lig1-211ENSMUST00000177588 Phldb1Q6PDH0 1371 aaKnown RBP17.01■□□□□ 0.31
Lig1-211ENSMUST00000177588 Anks4bQ8K3X6 423 aa17■□□□□ 0.31
Lig1-211ENSMUST00000177588 TnnQ80Z71 1560 aa16.99■□□□□ 0.31
Lig1-211ENSMUST00000177588 Top2aQ01320 1528 aaKnown RBP16.99■□□□□ 0.31
Lig1-211ENSMUST00000177588 Ubl4bQ9CQ84 188 aa16.98■□□□□ 0.31
Lig1-211ENSMUST00000177588 Il27Q8K3I6 234 aa16.97■□□□□ 0.31
Lig1-211ENSMUST00000177588 Unc13aQ4KUS2 1712 aa16.95■□□□□ 0.3
Lig1-211ENSMUST00000177588 Rapgef2Q8CHG7 1496 aa16.94■□□□□ 0.3
Lig1-211ENSMUST00000177588 Eif4g1Q6NZJ6 1600 aaKnown RBP16.91■□□□□ 0.3
Lig1-211ENSMUST00000177588 UbtfP25976 765 aaKnown RBP16.91■□□□□ 0.3
Lig1-211ENSMUST00000177588 Lamc3Q9R0B6 1581 aa16.9■□□□□ 0.3
Lig1-211ENSMUST00000177588 Aebp2Q9Z248 504 aaKnown RBP16.89■□□□□ 0.29
Lig1-211ENSMUST00000177588 Dnajc5bQ9CQ94 199 aa16.87■□□□□ 0.29
Lig1-211ENSMUST00000177588 1700123L14RikQ3V2K7 440 aa16.86■□□□□ 0.29
Lig1-211ENSMUST00000177588 Npm2Q80W85 207 aa16.85■□□□□ 0.29
Lig1-211ENSMUST00000177588 Wdr66E9Q743 1299 aa16.84■□□□□ 0.29
Lig1-211ENSMUST00000177588 Fam135aQ6NS59 1506 aa16.83■□□□□ 0.29
Lig1-211ENSMUST00000177588 Csrnp3P59055 597 aa16.83■□□□□ 0.28
Lig1-211ENSMUST00000177588 ClspnQ80YR7 1315 aa16.81■□□□□ 0.28
Lig1-211ENSMUST00000177588 Cux2P70298 1426 aa16.79■□□□□ 0.28
Lig1-211ENSMUST00000177588 Npm1Q61937 292 aaKnown RBP16.78■□□□□ 0.28
Lig1-211ENSMUST00000177588 Cep162Q6ZQ06 1403 aa16.78■□□□□ 0.28
Lig1-211ENSMUST00000177588 Ccdc18Q640L5 1455 aa16.77■□□□□ 0.27
Lig1-211ENSMUST00000177588 Myt1lP97500 1187 aa16.76■□□□□ 0.27
Lig1-211ENSMUST00000177588 Cdk11bP24788 784 aaKnown RBP16.75■□□□□ 0.27
Lig1-211ENSMUST00000177588 Nop58Q6DFW4 536 aaKnown RBP16.73■□□□□ 0.27
Lig1-211ENSMUST00000177588 Camsap1A2AHC3 1581 aa16.73■□□□□ 0.27
Lig1-211ENSMUST00000177588 TonslQ6NZL6 1363 aa16.66■□□□□ 0.26
Lig1-211ENSMUST00000177588 PtprkP35822 1457 aa16.65■□□□□ 0.26
Lig1-211ENSMUST00000177588 Aplp2Q06335 707 aa16.63■□□□□ 0.25
Lig1-211ENSMUST00000177588 Grin2bQ01097 1482 aa16.61■□□□□ 0.25
Lig1-211ENSMUST00000177588 Ppargc1bQ8VHJ7 1014 aa16.61■□□□□ 0.25
Lig1-211ENSMUST00000177588 Ncapd3Q6ZQK0 1506 aa16.59■□□□□ 0.25
Lig1-211ENSMUST00000177588 LrpprcQ6PB66 1392 aaKnown RBP16.58■□□□□ 0.24
Lig1-211ENSMUST00000177588 NrkQ9R0G8 1455 aa16.58■□□□□ 0.24
Lig1-211ENSMUST00000177588 Clip1Q922J3 1391 aa16.57■□□□□ 0.24
Lig1-211ENSMUST00000177588 Shroom4Q1W617 1475 aa16.57■□□□□ 0.24
Lig1-211ENSMUST00000177588 Mrc2Q64449 1479 aa16.55■□□□□ 0.24
Lig1-211ENSMUST00000177588 Plekhg3Q4VAC9 1341 aa16.52■□□□□ 0.24
Lig1-211ENSMUST00000177588 Arhgap35Q91YM2 1499 aa16.51■□□□□ 0.23
Lig1-211ENSMUST00000177588 Baz1bQ9Z277 1479 aa16.51■□□□□ 0.23
Lig1-211ENSMUST00000177588 Dhx29Q6PGC1 1365 aaKnown RBP16.49■□□□□ 0.23
Lig1-211ENSMUST00000177588 PogzQ8BZH4 1409 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms