RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Ino80Q6ZPV2 1559 aa14.89□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Uhrf1bp1B2KF50 1429 aa14.89□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Cdk19Q8BWD8 501 aa14.88□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Topbp1Q6ZQF0 1515 aa14.88□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Kdm4cQ8VCD7 1054 aa14.88□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Erich6bQ9D4S6 220 aa14.88□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Vamp4O70480 141 aa14.87□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Ddit3P35639 168 aa14.87□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Usp16Q99LG0 825 aa14.87□□□□□ -0.03
Rfx1-201ENSMUST00000005600 NgefQ8CHT1 710 aa14.87□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Tecpr2Q3UH45 1423 aa14.87□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Naip7Q9JIB3 1402 aa14.86□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Trim27Q62158 513 aa14.86□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Ric3Q8BPM6 367 aa14.86□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Triml2E9PW10 424 aa14.85□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Stk11ipQ3TAA7 1072 aa14.85□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Q9D9H8 365 aa14.85□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Bag4Q8CI61 457 aa14.85□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Q4VA45 678 aa14.85□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Plin1Q8CGN5 517 aa14.85□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Cdc42bpgQ80UW5 1551 aa14.84□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Ptch1Q61115 1434 aa14.84□□□□□ -0.03
Rfx1-201ENSMUST00000005600 1700019A02RikA0A087WPV9 146 aa14.84□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Gcc1Q9D4H2 778 aa14.84□□□□□ -0.03
Rfx1-201ENSMUST00000005600 Ppip5k2Q6ZQB6 1129 aa14.83□□□□□ -0.03
Rfx1-201ENSMUST00000005600 PogkQ80TC5 607 aa14.83□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Zkscan1Q8BGS3 561 aaKnown RBP14.83□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Bloc1s4Q8VED2 215 aa14.83□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Dmrtc1Q9D9R7 182 aa14.83□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Mcm2P97310 904 aa14.82□□□□□ -0.04
Rfx1-201ENSMUST00000005600 PtmsQ9D0J8 101 aaKnown RBP14.82□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Anapc15-psA0A140T8L6 141 aa14.82□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Atp7bQ64446 1462 aa14.82□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Akap12Q9WTQ5 1684 aa14.82□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Ppp1r15aP17564 657 aa14.82□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Cabp2Q9JLK4 216 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Znf541Q0GGX2 1363 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Arhgap23Q69ZH9 1483 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Prrc2bQ7TPM1 1486 aaKnown RBP14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Ift172Q6VH22 1749 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 CenppQ9CZ92 286 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Znf316Q6PGE4 1016 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Mroh1E0CZ22 1640 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Tmx3Q8BXZ1 456 aa14.81□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Trim28Q62318 834 aa14.8□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Tpm2P58774 284 aa14.8□□□□□ -0.04
Rfx1-201ENSMUST00000005600 VgfQ0VGU4 617 aa14.8□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Rab11fip3Q8CHD8 1047 aa14.8□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Aldh8a1Q8BH00 487 aa14.8□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Sos1Q62245 1319 aa14.79□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Rasa1E9PYG6 1038 aa14.79□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Atp10aO54827 1508 aa14.79□□□□□ -0.04
Rfx1-201ENSMUST00000005600 FanclQ9CR14 375 aa14.78□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Cavin2Q63918 418 aaKnown RBP14.78□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Ush1cQ9ES64 910 aa14.78□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Knl1Q66JQ7 1612 aa14.78□□□□□ -0.04
Rfx1-201ENSMUST00000005600 PtprtQ99M80 1454 aa14.78□□□□□ -0.04
Rfx1-201ENSMUST00000005600 ImpactO55091 318 aa14.77□□□□□ -0.04
Rfx1-201ENSMUST00000005600 Mcm10Q0VBD2 885 aa14.77□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Stk31Q99MW1 1018 aa14.77□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Q9D2X8 372 aa14.77□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Prdm2A2A7B5 1709 aaKnown RBP14.76□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Smarca5Q91ZW3 1051 aaKnown RBP14.76□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Pdia3P27773 505 aaKnown RBP14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Nucb1Q02819 459 aaKnown RBP14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Klhdc4Q921I2 584 aa14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Ppp6r3Q922D4 844 aa14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Cep170bQ80U49 1574 aa14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Pibf1E9Q6K3 756 aa14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Fam13aQ8BGI4 693 aa14.75□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Becn1O88597 448 aa14.74□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Fez1Q8K0X8 392 aa14.74□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Cyp46a1Q9WVK8 500 aa14.74□□□□□ -0.05
Rfx1-201ENSMUST00000005600 EngaseQ8BX80 734 aa14.74□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Dhx16G3X8X0 1044 aaKnown RBP14.73□□□□□ -0.05
Rfx1-201ENSMUST00000005600 IbspQ61711 324 aa14.73□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Clcn1Q64347 994 aa14.73□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Aldh1l2Q8K009 923 aa14.73□□□□□ -0.05
Rfx1-201ENSMUST00000005600 4931400O07RikQ9D4M5 137 aa14.73□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Map3k19E9Q3S4 1311 aa14.73□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Uhrf1bp1lA2RSJ4 1457 aa14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Erc2Q6PH08 957 aa14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Elp1Q7TT37 1333 aaKnown RBP14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Hsp90b1P08113 802 aaKnown RBP14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Rsph6aQ8CDR2 708 aa14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Usp32F8VPZ3 1604 aa14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 ScaperF8VQ70 1398 aaKnown RBP14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Prkar2bP31324 416 aa14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Gtf3c5Q8R2T8 520 aa14.72□□□□□ -0.05
Rfx1-201ENSMUST00000005600 MccE9PWI3 1003 aa14.71□□□□□ -0.05
Rfx1-201ENSMUST00000005600 MarsQ68FL6 902 aaKnown RBP14.71□□□□□ -0.05
Rfx1-201ENSMUST00000005600 Rbm10Q99KG3 930 aaKnown RBP14.71□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Cc2d1aQ8K1A6 943 aa14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Cyp27a1Q9DBG1 533 aa14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Pdia4P08003 638 aaKnown RBP14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Chrna2Q91X60 512 aa14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Tm6sf1P58749 370 aa14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Aifm3Q3TY86 605 aa14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 Gripap1Q8VD04 806 aa14.7□□□□□ -0.06
Rfx1-201ENSMUST00000005600 MpripP97434 1024 aa14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 80.2 ms