RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 NischQ80TM9 1593 aa21.94■■□□□ 1.1
Rfx1-201ENSMUST00000005600 Abcc9P70170 1546 aa21.25■□□□□ 0.99
Rfx1-201ENSMUST00000005600 Gm35339A0A140LHH9 1649 aa21.15■□□□□ 0.98
Rfx1-201ENSMUST00000005600 Rhox8Q6VSS7 320 aa21.11■□□□□ 0.97
Rfx1-201ENSMUST00000005600 Rtl1Q7M732 1744 aa20.78■□□□□ 0.92
Rfx1-201ENSMUST00000005600 Abcc8B2RUS7 1588 aa20.65■□□□□ 0.9
Rfx1-201ENSMUST00000005600 Ccdc180J3QNE4 1664 aa20.53■□□□□ 0.88
Rfx1-201ENSMUST00000005600 Rpgrip1Q9EPQ2 1331 aa20.32■□□□□ 0.84
Rfx1-201ENSMUST00000005600 Zcchc6Q5BLK4 1491 aaKnown RBP19.81■□□□□ 0.76
Rfx1-201ENSMUST00000005600 Acin1Q9JIX8 1338 aaKnown RBP19.77■□□□□ 0.76
Rfx1-201ENSMUST00000005600 Ehmt2Q9Z148 1263 aaKnown RBP19.63■□□□□ 0.73
Rfx1-201ENSMUST00000005600 HrcG5E8J6 738 aa19.55■□□□□ 0.72
Rfx1-201ENSMUST00000005600 Ccdc136Q3TVA9 1136 aa19.45■□□□□ 0.7
Rfx1-201ENSMUST00000005600 Dcaf1Q80TR8 1506 aa19.38■□□□□ 0.69
Rfx1-201ENSMUST00000005600 Rb1cc1Q9ESK9 1588 aa19.27■□□□□ 0.68
Rfx1-201ENSMUST00000005600 Trim41Q5NCC3 630 aa19.18■□□□□ 0.66
Rfx1-201ENSMUST00000005600 Pcgf6Q99NA9 353 aa19.17■□□□□ 0.66
Rfx1-201ENSMUST00000005600 Baz1aO88379 1555 aa19.02■□□□□ 0.64
Rfx1-201ENSMUST00000005600 ScribQ80U72 1612 aa19■□□□□ 0.63
Rfx1-201ENSMUST00000005600 Cep164Q5DU05 1446 aa18.83■□□□□ 0.61
Rfx1-201ENSMUST00000005600 Kdm5dQ62240 1548 aa18.83■□□□□ 0.61
Rfx1-201ENSMUST00000005600 Supt5hO55201 1082 aaKnown RBP18.77■□□□□ 0.59
Rfx1-201ENSMUST00000005600 NacadQ5SWP3 1504 aa18.66■□□□□ 0.58
Rfx1-201ENSMUST00000005600 Cngb1E1AZ71 1325 aa18.64■□□□□ 0.57
Rfx1-201ENSMUST00000005600 Gab3Q8BSM5 595 aa18.61■□□□□ 0.57
Rfx1-201ENSMUST00000005600 Smarca2Q6DIC0 1577 aa18.58■□□□□ 0.56
Rfx1-201ENSMUST00000005600 Zeb1Q64318 1117 aa18.56■□□□□ 0.56
Rfx1-201ENSMUST00000005600 NefmP08553 848 aa18.51■□□□□ 0.55
Rfx1-201ENSMUST00000005600 Crybg2B7ZCC2 1516 aa18.5■□□□□ 0.55
Rfx1-201ENSMUST00000005600 Chic1Q8CBW7 227 aa18.45■□□□□ 0.54
Rfx1-201ENSMUST00000005600 Rsf1E9PWW9 1441 aaKnown RBP18.42■□□□□ 0.54
Rfx1-201ENSMUST00000005600 Neurod1Q60867 357 aa18.4■□□□□ 0.54
Rfx1-201ENSMUST00000005600 Mier1Q5UAK0 511 aa18.36■□□□□ 0.53
Rfx1-201ENSMUST00000005600 Brd4Q9ESU6 1400 aaKnown RBP18.33■□□□□ 0.53
Rfx1-201ENSMUST00000005600 Las1lA2BE28 776 aaKnown RBP18.31■□□□□ 0.52
Rfx1-201ENSMUST00000005600 Golga3P55937 1487 aa18.23■□□□□ 0.51
Rfx1-201ENSMUST00000005600 Ccdc88bQ4QRL3 1481 aa18.23■□□□□ 0.51
Rfx1-201ENSMUST00000005600 Esf1Q3V1V3 845 aaKnown RBP18.21■□□□□ 0.51
Rfx1-201ENSMUST00000005600 Sycp2Q9CUU3 1500 aa18.2■□□□□ 0.5
Rfx1-201ENSMUST00000005600 Sall2Q9QX96 1004 aa18.19■□□□□ 0.5
Rfx1-201ENSMUST00000005600 Wdr66E9Q743 1299 aa18.11■□□□□ 0.49
Rfx1-201ENSMUST00000005600 Cecr2E9Q2Z1 1453 aa18.07■□□□□ 0.48
Rfx1-201ENSMUST00000005600 UbtfP25976 765 aaKnown RBP18.07■□□□□ 0.48
Rfx1-201ENSMUST00000005600 Synj1Q8CHC4 1574 aa18.02■□□□□ 0.48
Rfx1-201ENSMUST00000005600 Anks4bQ8K3X6 423 aa17.97■□□□□ 0.47
Rfx1-201ENSMUST00000005600 CftrP26361 1476 aa17.88■□□□□ 0.45
Rfx1-201ENSMUST00000005600 Myt1lP97500 1187 aa17.87■□□□□ 0.45
Rfx1-201ENSMUST00000005600 Cdk11bP24788 784 aaKnown RBP17.87■□□□□ 0.45
Rfx1-201ENSMUST00000005600 ClspnQ80YR7 1315 aa17.85■□□□□ 0.45
Rfx1-201ENSMUST00000005600 Aebp2Q9Z248 504 aaKnown RBP17.84■□□□□ 0.45
Rfx1-201ENSMUST00000005600 Nop58Q6DFW4 536 aaKnown RBP17.83■□□□□ 0.45
Rfx1-201ENSMUST00000005600 Csrnp3P59055 597 aa17.82■□□□□ 0.44
Rfx1-201ENSMUST00000005600 Top2bQ64511 1612 aa17.81■□□□□ 0.44
Rfx1-201ENSMUST00000005600 1700123L14RikQ3V2K7 440 aa17.79■□□□□ 0.44
Rfx1-201ENSMUST00000005600 Npm2Q80W85 207 aa17.76■□□□□ 0.43
Rfx1-201ENSMUST00000005600 Cttnbp2B9EJA2 1648 aa17.75■□□□□ 0.43
Rfx1-201ENSMUST00000005600 Rapgef2Q8CHG7 1496 aa17.74■□□□□ 0.43
Rfx1-201ENSMUST00000005600 TonslQ6NZL6 1363 aa17.74■□□□□ 0.43
Rfx1-201ENSMUST00000005600 Ppargc1bQ8VHJ7 1014 aa17.73■□□□□ 0.43
Rfx1-201ENSMUST00000005600 Cc2d2aQ8CFW7 1633 aa17.71■□□□□ 0.43
Rfx1-201ENSMUST00000005600 BicraF8VPZ9 1578 aa17.68■□□□□ 0.42
Rfx1-201ENSMUST00000005600 Fmn1Q05860 1466 aa17.66■□□□□ 0.42
Rfx1-201ENSMUST00000005600 Cep162Q6ZQ06 1403 aa17.66■□□□□ 0.42
Rfx1-201ENSMUST00000005600 CenpbP27790 599 aa17.63■□□□□ 0.41
Rfx1-201ENSMUST00000005600 Aplp2Q06335 707 aa17.61■□□□□ 0.41
Rfx1-201ENSMUST00000005600 Plekhg3Q4VAC9 1341 aa17.6■□□□□ 0.41
Rfx1-201ENSMUST00000005600 Clip1Q922J3 1391 aa17.59■□□□□ 0.41
Rfx1-201ENSMUST00000005600 Top2aQ01320 1528 aaKnown RBP17.58■□□□□ 0.4
Rfx1-201ENSMUST00000005600 Smarca4Q3TKT4 1613 aaKnown RBP17.54■□□□□ 0.4
Rfx1-201ENSMUST00000005600 Myt1Q8CFC2 1127 aa17.5■□□□□ 0.39
Rfx1-201ENSMUST00000005600 DiexfQ8BTT6 772 aaKnown RBP17.42■□□□□ 0.38
Rfx1-201ENSMUST00000005600 Gm38655A0A286YDK6 273 aa17.39■□□□□ 0.37
Rfx1-201ENSMUST00000005600 Ncapd3Q6ZQK0 1506 aa17.37■□□□□ 0.37
Rfx1-201ENSMUST00000005600 Ap3b1Q9Z1T1 1105 aa17.34■□□□□ 0.37
Rfx1-201ENSMUST00000005600 Eid3Q3V124 375 aa17.33■□□□□ 0.36
Rfx1-201ENSMUST00000005600 Tnnt3Q9QZ47 272 aa17.31■□□□□ 0.36
Rfx1-201ENSMUST00000005600 Eea1Q8BL66 1411 aa17.28■□□□□ 0.36
Rfx1-201ENSMUST00000005600 Iqgap2Q3UQ44 1575 aa17.27■□□□□ 0.36
Rfx1-201ENSMUST00000005600 Eif4g1Q6NZJ6 1600 aaKnown RBP17.24■□□□□ 0.35
Rfx1-201ENSMUST00000005600 Il27Q8K3I6 234 aa17.23■□□□□ 0.35
Rfx1-201ENSMUST00000005600 Setd5Q5XJV7 1441 aa17.21■□□□□ 0.35
Rfx1-201ENSMUST00000005600 Arhgap35Q91YM2 1499 aa17.2■□□□□ 0.34
Rfx1-201ENSMUST00000005600 Arap1Q4LDD4 1452 aa17.17■□□□□ 0.34
Rfx1-201ENSMUST00000005600 Ccdc18Q640L5 1455 aa17.16■□□□□ 0.34
Rfx1-201ENSMUST00000005600 Stra8P70278 393 aa17.15■□□□□ 0.34
Rfx1-201ENSMUST00000005600 Hnrnpul2Q00PI9 745 aaKnown RBP17.15■□□□□ 0.34
Rfx1-201ENSMUST00000005600 NclP09405 707 aaKnown RBP17.13■□□□□ 0.33
Rfx1-201ENSMUST00000005600 Fam50aQ9WV03 339 aaKnown RBP17.12■□□□□ 0.33
Rfx1-201ENSMUST00000005600 Mapk8ip2Q9ERE9 830 aa17.1■□□□□ 0.33
Rfx1-201ENSMUST00000005600 Arhgef5E9Q7D5 1581 aa17.1■□□□□ 0.33
Rfx1-201ENSMUST00000005600 Atad2bE9Q166 1460 aaKnown RBP17.1■□□□□ 0.33
Rfx1-201ENSMUST00000005600 Baz1bQ9Z277 1479 aa17.1■□□□□ 0.33
Rfx1-201ENSMUST00000005600 PtprkP35822 1457 aa17.09■□□□□ 0.33
Rfx1-201ENSMUST00000005600 Bcl11aQ9QYE3 773 aa17.08■□□□□ 0.33
Rfx1-201ENSMUST00000005600 TnnQ80Z71 1560 aa17.08■□□□□ 0.32
Rfx1-201ENSMUST00000005600 NrkQ9R0G8 1455 aa17.08■□□□□ 0.32
Rfx1-201ENSMUST00000005600 BlmO88700 1416 aa17.07■□□□□ 0.32
Rfx1-201ENSMUST00000005600 SafbD3YXK2 937 aaKnown RBP17.06■□□□□ 0.32
Rfx1-201ENSMUST00000005600 Kdm5bQ80Y84 1544 aa17.02■□□□□ 0.32
Rfx1-201ENSMUST00000005600 Fam71e1A1L3C1 212 aa17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms