RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
TIF6	YPR016C	MRD1	Q06106	887 aa	Known RBP	11.42	□□□□□ -0.58
TIF6	YPR016C	YPL260W	Q08977	551 aa		11.42	□□□□□ -0.58
TIF6	YPR016C	GSC2	P40989	1895 aa		11.41	□□□□□ -0.58
TIF6	YPR016C	YHL050C	P38721	697 aa		11.41	□□□□□ -0.58
TIF6	YPR016C	RTS1	P38903	757 aa		11.41	□□□□□ -0.58
TIF6	YPR016C	UFD2	P54860	961 aa		11.41	□□□□□ -0.58
TIF6	YPR016C	RPS15	Q01855	142 aa	Known RBP	11.41	□□□□□ -0.58
TIF6	YPR016C	ESF1	Q06344	628 aa	Known RBP	11.41	□□□□□ -0.58
TIF6	YPR016C	KEL3	Q08979	651 aa	Predicted RBP	11.41	□□□□□ -0.58
TIF6	YPR016C	CBP1	P07252	654 aa		11.4	□□□□□ -0.58
TIF6	YPR016C	PEP3	P27801	918 aa		11.4	□□□□□ -0.58
TIF6	YPR016C	PUS5	Q06244	254 aa		11.4	□□□□□ -0.58
TIF6	YPR016C	SPN1	Q06505	410 aa	Predicted RBP	11.4	□□□□□ -0.58
TIF6	YPR016C	CRG1	P38892	291 aa	RIP-Chip data	11.39	□□□□□ -0.59	not detected
TIF6	YPR016C	SPO22	P40511	975 aa		11.39	□□□□□ -0.59
TIF6	YPR016C	EMP47	P43555	445 aa		11.39	□□□□□ -0.59
TIF6	YPR016C	SRS2	P12954	1174 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	PCT1	P13259	424 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	RER2	P35196	286 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	OPY1	P38271	328 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	VID27	P40157	782 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	VID28	P40547	921 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	PCL8	Q08966	492 aa		11.38	□□□□□ -0.59
TIF6	YPR016C	ADP1	P25371	1049 aa		11.37	□□□□□ -0.59
TIF6	YPR016C	ARP5	P53946	755 aa		11.37	□□□□□ -0.59
TIF6	YPR016C	HDA1	P53973	706 aa		11.37	□□□□□ -0.59
TIF6	YPR016C	TSR3	Q12094	313 aa	Known RBP	11.37	□□□□□ -0.59
TIF6	YPR016C	RAD61	Q99359	647 aa		11.37	□□□□□ -0.59
TIF6	YPR016C	AAD16	Q02895	342 aa		11.36	□□□□□ -0.59
TIF6	YPR016C	PMA1	P05030	918 aa	Known RBP	11.35	□□□□□ -0.59
TIF6	YPR016C	ANP1	P32629	500 aa		11.35	□□□□□ -0.59
TIF6	YPR016C	YBL028C	P38202	106 aa		11.35	□□□□□ -0.59
TIF6	YPR016C	PTK2	P47116	818 aa	Known RBP	11.35	□□□□□ -0.59
TIF6	YPR016C	EST2	Q06163	884 aa		11.35	□□□□□ -0.59
TIF6	YPR016C	KEL1	P38853	1164 aa	Known RBP	11.34	□□□□□ -0.59
TIF6	YPR016C	NIT1	P40447	199 aa		11.34	□□□□□ -0.59
TIF6	YPR016C	MSH4	P40965	878 aa	Predicted RBP	11.34	□□□□□ -0.59
TIF6	YPR016C	YDL124W	Q07551	312 aa	Known RBP	11.34	□□□□□ -0.59
TIF6	YPR016C	RAD53	P22216	821 aa		11.33	□□□□□ -0.6
TIF6	YPR016C	RIT1	P23796	513 aa		11.33	□□□□□ -0.6
TIF6	YPR016C	PRO3	P32263	286 aa	Known RBP	11.33	□□□□□ -0.6
TIF6	YPR016C	MYO3	P36006	1272 aa		11.33	□□□□□ -0.6
TIF6	YPR016C	SIS2	P36024	562 aa		11.33	□□□□□ -0.6
TIF6	YPR016C	VHR2	P40041	505 aa		11.33	□□□□□ -0.6
TIF6	YPR016C	VPS20	Q04272	221 aa		11.33	□□□□□ -0.6
TIF6	YPR016C	PRE8	P23639	250 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	FBP26	P32604	452 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	VPS8	P39702	1274 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	NPA3	P47122	385 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	ENT3	P47160	408 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	ECM23	Q02710	187 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	TFC6	Q06339	672 aa		11.32	□□□□□ -0.6
TIF6	YPR016C	KIN1	P13185	1064 aa		11.31	□□□□□ -0.6
TIF6	YPR016C	CTF18	P49956	741 aa		11.31	□□□□□ -0.6
TIF6	YPR016C	PEX21	P50091	288 aa		11.31	□□□□□ -0.6
TIF6	YPR016C	YKE2	P52553	114 aa		11.31	□□□□□ -0.6
TIF6	YPR016C	MPH3	P0CE00	602 aa		11.3	□□□□□ -0.6
TIF6	YPR016C	RPL19A	P0CX82	189 aa	Known RBP	11.3	□□□□□ -0.6
TIF6	YPR016C	RPL19B	P0CX83	189 aa	Predicted RBP	11.3	□□□□□ -0.6
TIF6	YPR016C	ACE2	P21192	770 aa		11.3	□□□□□ -0.6
TIF6	YPR016C	SRM1	P21827	482 aa		11.3	□□□□□ -0.6
TIF6	YPR016C	SPT21	P35209	758 aa		11.3	□□□□□ -0.6
TIF6	YPR016C	PEA2	P40091	420 aa		11.3	□□□□□ -0.6
TIF6	YPR016C	EPL1	P43572	832 aa		11.3	□□□□□ -0.6
TIF6	YPR016C	TUB2	P02557	457 aa	Known RBP	11.29	□□□□□ -0.6
TIF6	YPR016C	MATALPHA2	P0CY08	210 aa		11.29	□□□□□ -0.6
TIF6	YPR016C	HMLALPHA2	P0CY09	210 aa		11.29	□□□□□ -0.6
TIF6	YPR016C	GAL2	P13181	574 aa		11.29	□□□□□ -0.6
TIF6	YPR016C	SSA4	P22202	642 aa	Known RBP	11.29	□□□□□ -0.6
TIF6	YPR016C	CST26	P38226	397 aa		11.29	□□□□□ -0.6
TIF6	YPR016C	CSM2	P40465	213 aa		11.29	□□□□□ -0.6
TIF6	YPR016C	CWC15	Q03772	175 aa	Known RBP	11.29	□□□□□ -0.6
TIF6	YPR016C	CSR2	Q12734	1121 aa		11.29	□□□□□ -0.6
TIF6	YPR016C	MAK31	P23059	88 aa		11.28	□□□□□ -0.6
TIF6	YPR016C	CHS3	P29465	1165 aa		11.28	□□□□□ -0.6
TIF6	YPR016C	TPS3	P38426	1054 aa	Known RBP	11.28	□□□□□ -0.6
TIF6	YPR016C	AKR1	P39010	764 aa		11.28	□□□□□ -0.6
TIF6	YPR016C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
TIF6	YPR016C	PNT1	P38969	423 aa		11.27	□□□□□ -0.61
TIF6	YPR016C	YGL081W	P53156	320 aa		11.27	□□□□□ -0.61
TIF6	YPR016C	SNU71	P53207	620 aa	Known RBP	11.27	□□□□□ -0.61
TIF6	YPR016C	SKG3	Q06315	1026 aa		11.27	□□□□□ -0.61
TIF6	YPR016C	LAP2	Q10740	671 aa		11.27	□□□□□ -0.61
TIF6	YPR016C	IME2	P32581	645 aa		11.26	□□□□□ -0.61
TIF6	YPR016C	RPT6	Q01939	405 aa	Known RBP	11.26	□□□□□ -0.61
TIF6	YPR016C	MYO5	Q04439	1219 aa	Known RBP	11.26	□□□□□ -0.61
TIF6	YPR016C	HCA4	P20448	770 aa	Known RBP	11.25	□□□□□ -0.61
TIF6	YPR016C	RPL8B	P29453	256 aa	Known RBP	11.25	□□□□□ -0.61
TIF6	YPR016C	YHL017W	P38745	532 aa		11.25	□□□□□ -0.61
TIF6	YPR016C	ACA1	P39970	489 aa		11.25	□□□□□ -0.61
TIF6	YPR016C	ALG2	P43636	503 aa		11.25	□□□□□ -0.61
TIF6	YPR016C	PSK2	Q08217	1101 aa		11.25	□□□□□ -0.61
TIF6	YPR016C	YOR111W	Q99210	232 aa		11.25	□□□□□ -0.61
TIF6	YPR016C	BIK1	P11709	440 aa		11.24	□□□□□ -0.61
TIF6	YPR016C	SAM2	P19358	384 aa	Known RBP	11.24	□□□□□ -0.61
TIF6	YPR016C	VPS24	P36095	224 aa	Known RBP	11.24	□□□□□ -0.61
TIF6	YPR016C	YIL089W	P40500	205 aa		11.24	□□□□□ -0.61
TIF6	YPR016C	DJP1	P40564	432 aa		11.24	□□□□□ -0.61
TIF6	YPR016C	BUD6	P41697	788 aa		11.24	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms