RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C KAR5Q04746 504 aa1.21□□□□□ -2.22
RKR1YMR247C YCS4Q06156 1176 aa1.21□□□□□ -2.22
RKR1YMR247C CBC2Q08920 208 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
RKR1YMR247C YPR053CQ6Q5F3 151 aa1.21□□□□□ -2.22
RKR1YMR247C COQ4O13525 335 aa1.2□□□□□ -2.22
RKR1YMR247C VMA3P25515 160 aa1.2□□□□□ -2.22
RKR1YMR247C NMD3P38861 518 aaKnown RBP1.2□□□□□ -2.22
RKR1YMR247C CIT3P43635 486 aa1.2□□□□□ -2.22
RKR1YMR247C ROM1P53046 1155 aa1.2□□□□□ -2.22
RKR1YMR247C YGR122WP53272 402 aa1.2□□□□□ -2.22
RKR1YMR247C GIS4Q04233 774 aa1.2□□□□□ -2.22
RKR1YMR247C RGD1P38339 666 aa1.2□□□□□ -2.22
RKR1YMR247C GEM1P39722 662 aa1.2□□□□□ -2.22
RKR1YMR247C PSY2P40164 858 aa1.2□□□□□ -2.22
RKR1YMR247C FET4P40988 552 aa1.2□□□□□ -2.22
RKR1YMR247C FOL2P51601 243 aaKnown RBP1.2□□□□□ -2.22
RKR1YMR247C FPR4Q06205 392 aaPredicted RBP1.2□□□□□ -2.22
RKR1YMR247C ERF2Q06551 359 aa1.2□□□□□ -2.22
RKR1YMR247C AOS1Q06624 347 aa1.2□□□□□ -2.22
RKR1YMR247C TY4B-PA0A0B7P3V8 1104 aa1.2□□□□□ -2.22
RKR1YMR247C SCP160P06105 1222 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
RKR1YMR247C PDC5P16467 563 aaKnown RBP1.2□□□□□ -2.22
RKR1YMR247C PUP1P25043 261 aa1.2□□□□□ -2.22
RKR1YMR247C PIN4P34217 668 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
RKR1YMR247C YBR197CP38306 217 aa1.2□□□□□ -2.22
RKR1YMR247C RIM11P38615 370 aa1.2□□□□□ -2.22
RKR1YMR247C CUZ1P53899 274 aa1.2□□□□□ -2.22
RKR1YMR247C NOC3Q07896 663 aaPredicted RBP1.2□□□□□ -2.22
RKR1YMR247C GUP2Q08929 609 aa1.2□□□□□ -2.22
RKR1YMR247C YOR223WQ12015 292 aa1.2□□□□□ -2.22
RKR1YMR247C TY4A-HQ6Q5P6 413 aa1.2□□□□□ -2.22
RKR1YMR247C FLP1P03870 423 aa1.19□□□□□ -2.22
RKR1YMR247C HVG1P0CE11 249 aa1.19□□□□□ -2.22
RKR1YMR247C SEC23P15303 768 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C PRE9P23638 258 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C SMY2P32909 740 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C KAE1P36132 386 aa1.19□□□□□ -2.22
RKR1YMR247C MRPS18P42847 217 aa1.19□□□□□ -2.22
RKR1YMR247C YJR107WP47145 328 aa1.19□□□□□ -2.22
RKR1YMR247C PRP43P53131 767 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C UTP22P53254 1237 aaPredicted RBP1.19□□□□□ -2.22
RKR1YMR247C KRE33P53914 1056 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C MED7Q08278 222 aa1.19□□□□□ -2.22
RKR1YMR247C CLF1Q12309 687 aaPredicted RBP1.19□□□□□ -2.22
RKR1YMR247C GPM1P00950 247 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C STE11P23561 717 aa1.19□□□□□ -2.22
RKR1YMR247C SCJ1P25303 377 aa1.19□□□□□ -2.22
RKR1YMR247C COQ2P32378 372 aa1.19□□□□□ -2.22
RKR1YMR247C YEL1P34225 687 aa1.19□□□□□ -2.22
RKR1YMR247C GGA2P38817 585 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C PIK1P39104 1066 aa1.19□□□□□ -2.22
RKR1YMR247C SIW14P53965 281 aa1.19□□□□□ -2.22
RKR1YMR247C TY1A-DR2Q03964 440 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C RKM4Q12504 494 aa1.19□□□□□ -2.22
RKR1YMR247C RPS31P05759 152 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C PGM1P33401 570 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C YBR238CP38330 731 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C INP51P40559 946 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C NOP2P40991 618 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C ADI1Q03677 179 aa1.19□□□□□ -2.22
RKR1YMR247C SHE9Q04172 456 aa1.19□□□□□ -2.22
RKR1YMR247C CAB1Q04430 367 aa1.19□□□□□ -2.22
RKR1YMR247C PRP9P19736 530 aaKnown RBP1.19□□□□□ -2.22
RKR1YMR247C PKC1P24583 1151 aa1.19□□□□□ -2.22
RKR1YMR247C SQT1P35184 431 aa1.19□□□□□ -2.22
RKR1YMR247C UBX7P38349 436 aa1.19□□□□□ -2.22
RKR1YMR247C SAF1P38352 637 aa1.19□□□□□ -2.22
RKR1YMR247C MET10P39692 1035 aa1.19□□□□□ -2.22
RKR1YMR247C RAD26P40352 1085 aa1.19□□□□□ -2.22
RKR1YMR247C SPO74P45819 413 aa1.19□□□□□ -2.22
RKR1YMR247C SRC1Q03707 834 aa1.19□□□□□ -2.22
RKR1YMR247C STB3Q12427 513 aa1.19□□□□□ -2.22
RKR1YMR247C RAS1P01119 309 aa1.18□□□□□ -2.22
RKR1YMR247C KIN2P13186 1147 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C PDI1P17967 522 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C MRP8P35719 219 aa1.18□□□□□ -2.22
RKR1YMR247C QDR2P40474 542 aa1.18□□□□□ -2.22
RKR1YMR247C QDR1P40475 563 aa1.18□□□□□ -2.22
RKR1YMR247C NNF1P47149 201 aa1.18□□□□□ -2.22
RKR1YMR247C NUT1P53114 1132 aa1.18□□□□□ -2.22
RKR1YMR247C TNA1P53322 534 aa1.18□□□□□ -2.22
RKR1YMR247C CUS1Q02554 436 aaPredicted RBP1.18□□□□□ -2.22
RKR1YMR247C YDJ1P25491 409 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C SBA1P28707 216 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C NGG1P32494 702 aa1.18□□□□□ -2.22
RKR1YMR247C AMN1P38285 549 aaPredicted RBP1.18□□□□□ -2.22
RKR1YMR247C YIR007WP40566 764 aa1.18□□□□□ -2.22
RKR1YMR247C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22 RIP-Chip
RKR1YMR247C SNO2P53823 222 aa1.18□□□□□ -2.22
RKR1YMR247C ECM23Q02710 187 aa1.18□□□□□ -2.22
RKR1YMR247C ELG1Q12050 791 aa1.18□□□□□ -2.22
RKR1YMR247C PUB1P32588 453 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
RKR1YMR247C ADD66P36040 267 aa1.18□□□□□ -2.22
RKR1YMR247C MRPL16P38064 232 aa1.18□□□□□ -2.22
RKR1YMR247C TAT1P38085 619 aa1.18□□□□□ -2.22
RKR1YMR247C PRK1P40494 810 aa1.18□□□□□ -2.22
RKR1YMR247C SRP1Q02821 542 aaKnown RBP1.18□□□□□ -2.22
RKR1YMR247C YMR187CQ03236 431 aa1.18□□□□□ -2.22
RKR1YMR247C PUS5Q06244 254 aa1.18□□□□□ -2.22
RKR1YMR247C RTT10Q08924 1013 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms