RNA–Protein interactions for RNA: YMR090W

YMR090W, Transcript of Putative protein of unknown function, yeast

Gene YMR090W, Length 684 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR090W	YMR090W	KAR5	Q04746	504 aa		13.84	□□□□□ -0.19
YMR090W	YMR090W	GRE2	Q12068	342 aa	Known RBP	13.84	□□□□□ -0.19
YMR090W	YMR090W	NOC2	P39744	710 aa	Known RBP	13.83	□□□□□ -0.2
YMR090W	YMR090W	VMS1	Q04311	632 aa	Known RBP	13.83	□□□□□ -0.2
YMR090W	YMR090W	DIB1	Q06819	143 aa	Predicted RBP	13.83	□□□□□ -0.2
YMR090W	YMR090W	UTP10	P42945	1769 aa	Known RBP	13.82	□□□□□ -0.2
YMR090W	YMR090W	SSA2	P10592	639 aa	Known RBP	13.82	□□□□□ -0.2
YMR090W	YMR090W	ASF1	P32447	279 aa		13.82	□□□□□ -0.2
YMR090W	YMR090W	LTV1	P34078	463 aa		13.82	□□□□□ -0.2
YMR090W	YMR090W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.82	□□□□□ -0.2	not detected
YMR090W	YMR090W	RAT1	Q02792	1006 aa	Known RBP	13.82	□□□□□ -0.2
YMR090W	YMR090W	CYB2	P00175	591 aa		13.81	□□□□□ -0.2
YMR090W	YMR090W	RGP1	P16664	663 aa		13.81	□□□□□ -0.2
YMR090W	YMR090W	BMH2	P34730	273 aa	Known RBP	13.81	□□□□□ -0.2
YMR090W	YMR090W	MNR2	P35724	969 aa		13.81	□□□□□ -0.2
YMR090W	YMR090W	EPL1	P43572	832 aa		13.81	□□□□□ -0.2
YMR090W	YMR090W	WAR1	Q03631	944 aa		13.81	□□□□□ -0.2
YMR090W	YMR090W	NGR1	P32831	672 aa	Known RBP	13.8	□□□□□ -0.2
YMR090W	YMR090W	YCG1	Q06680	1035 aa		13.8	□□□□□ -0.2
YMR090W	YMR090W	PET111	P08468	800 aa		13.79	□□□□□ -0.2
YMR090W	YMR090W	GLO3	P38682	493 aa	Known RBP	13.79	□□□□□ -0.2
YMR090W	YMR090W	HCR1	Q05775	265 aa	Known RBP	13.79	□□□□□ -0.2
YMR090W	YMR090W	ISW2	Q08773	1120 aa		13.79	□□□□□ -0.2
YMR090W	YMR090W	SRP40	P32583	406 aa	Predicted RBP	13.78	□□□□□ -0.2
YMR090W	YMR090W	RPN10	P38886	268 aa	Known RBP	13.78	□□□□□ -0.2
YMR090W	YMR090W	CTH1	P47976	325 aa		13.78	□□□□□ -0.2
YMR090W	YMR090W	FYV10	P40492	516 aa		13.77	□□□□□ -0.21
YMR090W	YMR090W	PPM2	Q08282	695 aa		13.77	□□□□□ -0.21
YMR090W	YMR090W	HCA4	P20448	770 aa	Known RBP	13.76	□□□□□ -0.21
YMR090W	YMR090W	MRC1	P25588	1096 aa		13.76	□□□□□ -0.21
YMR090W	YMR090W	CUE3	P53137	624 aa	Known RBP	13.76	□□□□□ -0.21
YMR090W	YMR090W	VPS75	P53853	264 aa		13.76	□□□□□ -0.21
YMR090W	YMR090W	DPH6	Q12429	685 aa		13.76	□□□□□ -0.21
YMR090W	YMR090W	SAP190	P36123	1033 aa		13.75	□□□□□ -0.21
YMR090W	YMR090W	AKR1	P39010	764 aa		13.75	□□□□□ -0.21
YMR090W	YMR090W	ALG2	P43636	503 aa		13.75	□□□□□ -0.21
YMR090W	YMR090W	THI3	Q07471	609 aa		13.75	□□□□□ -0.21
YMR090W	YMR090W	NBL1	Q3E7Y6	73 aa		13.75	□□□□□ -0.21
YMR090W	YMR090W	COQ1	P18900	473 aa		13.74	□□□□□ -0.21
YMR090W	YMR090W	UFD2	P54860	961 aa		13.74	□□□□□ -0.21
YMR090W	YMR090W	GFD1	Q04839	188 aa	Known RBP	13.74	□□□□□ -0.21
YMR090W	YMR090W	SWI4	P25302	1093 aa	Known RBP	13.73	□□□□□ -0.21
YMR090W	YMR090W	BMH1	P29311	267 aa	Known RBP	13.73	□□□□□ -0.21
YMR090W	YMR090W	MGM1	P32266	881 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	ADE17	P38009	592 aa	Known RBP	13.73	□□□□□ -0.21
YMR090W	YMR090W	MAL31	P38156	614 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	RPS15	Q01855	142 aa	Known RBP	13.73	□□□□□ -0.21
YMR090W	YMR090W	GDE1	Q02979	1223 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	COG4	Q06096	861 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	DCS2	Q12123	353 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	BUG1	Q12191	341 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	CEX1	Q12453	761 aa		13.73	□□□□□ -0.21
YMR090W	YMR090W	MCM4	P30665	933 aa	Known RBP	13.72	□□□□□ -0.21
YMR090W	YMR090W	SAC6	P32599	642 aa	Known RBP	13.72	□□□□□ -0.21
YMR090W	YMR090W	CIN4	P39110	191 aa		13.72	□□□□□ -0.21
YMR090W	YMR090W	GET3	Q12154	354 aa	Known RBP	13.72	□□□□□ -0.21
YMR090W	YMR090W	MCM3	P24279	971 aa	Known RBP	13.71	□□□□□ -0.21
YMR090W	YMR090W	GRX7	P38068	203 aa		13.71	□□□□□ -0.21
YMR090W	YMR090W	SYF1	Q04048	859 aa	Predicted RBP	13.71	□□□□□ -0.21
YMR090W	YMR090W	INM2	Q05533	292 aa		13.71	□□□□□ -0.21
YMR090W	YMR090W	CSC1	Q06538	782 aa		13.71	□□□□□ -0.21
YMR090W	YMR090W	BOI1	P38041	980 aa	Known RBP	13.7	□□□□□ -0.22
YMR090W	YMR090W	ICP55	P40051	511 aa		13.7	□□□□□ -0.22
YMR090W	YMR090W	RTC4	P53850	401 aa		13.7	□□□□□ -0.22
YMR090W	YMR090W	PSF3	Q12146	194 aa		13.7	□□□□□ -0.22
YMR090W	YMR090W	CAJ1	P39101	391 aa		13.69	□□□□□ -0.22
YMR090W	YMR090W	MGA2	P40578	1113 aa		13.69	□□□□□ -0.22
YMR090W	YMR090W	UTP22	P53254	1237 aa	Predicted RBP	13.69	□□□□□ -0.22
YMR090W	YMR090W	MRD1	Q06106	887 aa	Known RBP	13.69	□□□□□ -0.22
YMR090W	YMR090W	TFC6	Q06339	672 aa		13.69	□□□□□ -0.22
YMR090W	YMR090W	PHO13	P19881	312 aa		13.68	□□□□□ -0.22
YMR090W	YMR090W	RTS1	P38903	757 aa		13.68	□□□□□ -0.22
YMR090W	YMR090W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.68	□□□□□ -0.22	not detected
YMR090W	YMR090W	CDC6	P09119	513 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	CDC15	P27636	974 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	URA1	P28272	314 aa	Predicted RBP	13.67	□□□□□ -0.22
YMR090W	YMR090W	ANP1	P32629	500 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	PSY4	P38193	441 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	YIR042C	P40586	236 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	RPN11	P43588	306 aa	Known RBP	13.67	□□□□□ -0.22
YMR090W	YMR090W	OSW7	P43611	510 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	FYV8	P46949	817 aa	Known RBP	13.67	□□□□□ -0.22
YMR090W	YMR090W	ALF1	P53904	254 aa		13.67	□□□□□ -0.22
YMR090W	YMR090W	RRP1	P35178	278 aa	Predicted RBP	13.66	□□□□□ -0.22
YMR090W	YMR090W	RXT2	P38255	430 aa		13.66	□□□□□ -0.22
YMR090W	YMR090W	PDC1	P06169	563 aa	Known RBP	13.65	□□□□□ -0.22
YMR090W	YMR090W	PET123	P17558	318 aa		13.65	□□□□□ -0.22
YMR090W	YMR090W	STE11	P23561	717 aa		13.65	□□□□□ -0.22
YMR090W	YMR090W	MSH4	P40965	878 aa	Predicted RBP	13.65	□□□□□ -0.22
YMR090W	YMR090W	APT1	P49435	187 aa	Known RBP	13.65	□□□□□ -0.22
YMR090W	YMR090W	NAF1	P53919	492 aa	Known RBP	13.65	□□□□□ -0.22
YMR090W	YMR090W	MMR1	Q06324	491 aa		13.65	□□□□□ -0.22
YMR090W	YMR090W	TMA16	Q08687	178 aa		13.65	□□□□□ -0.22
YMR090W	YMR090W	TIP41	Q12199	356 aa		13.65	□□□□□ -0.22
YMR090W	YMR090W	MAK31	P23059	88 aa		13.64	□□□□□ -0.23
YMR090W	YMR090W	MSH3	P25336	1018 aa		13.64	□□□□□ -0.23
YMR090W	YMR090W	ALD2	P47771	506 aa		13.64	□□□□□ -0.23
YMR090W	YMR090W	VPS38	Q05919	439 aa		13.64	□□□□□ -0.23
YMR090W	YMR090W	BDF2	Q07442	638 aa		13.64	□□□□□ -0.23
YMR090W	YMR090W	GIN4	Q12263	1142 aa		13.64	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 494.5 ms