RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	YPR015C	Q12531	247 aa		2.06	□□□□□ -2.08
YCS4	YLR272C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.06	□□□□□ -2.08	not detected
YCS4	YLR272C	TOM20	P35180	183 aa		2.06	□□□□□ -2.08
YCS4	YLR272C	YKL077W	P36081	392 aa		2.06	□□□□□ -2.08
YCS4	YLR272C	ISU1	Q03020	165 aa		2.06	□□□□□ -2.08
YCS4	YLR272C	ESC2	Q06340	456 aa		2.06	□□□□□ -2.08
YCS4	YLR272C	CIT2	P08679	460 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.05	□□□□□ -2.08	not detected
YCS4	YLR272C	NMD2	P38798	1089 aa	Known RBP	2.05	□□□□□ -2.08
YCS4	YLR272C	ACF4	P47129	309 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	HIM1	Q06674	414 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	CCP1	P00431	361 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	INO1	P11986	533 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	VMA3	P25515	160 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	VAC17	P25591	423 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	FBP26	P32604	452 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	ARH1	P48360	493 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	TAN1	P53072	289 aa	Predicted RBP	2.05	□□□□□ -2.08
YCS4	YLR272C	SDA1	P53313	767 aa	Known RBP	2.05	□□□□□ -2.08
YCS4	YLR272C	MRPL33	P20084	86 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	YBR184W	P38299	523 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	TPO2	P53283	614 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	SUB1	P54000	292 aa	Known RBP	2.05	□□□□□ -2.08
YCS4	YLR272C	YMR265C	Q03508	461 aa	Known RBP	2.05	□□□□□ -2.08
YCS4	YLR272C	CRR1	Q05790	422 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	YOL057W	Q08225	711 aa		2.05	□□□□□ -2.08
YCS4	YLR272C	RAD2	P07276	1031 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	PER1	P25625	357 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	PRE3	P38624	215 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	VPS16	Q03308	798 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	MAG2	Q06436	670 aa	Known RBP	2.04	□□□□□ -2.08
YCS4	YLR272C	ALG6	Q12001	544 aa	Known RBP	2.04	□□□□□ -2.08
YCS4	YLR272C	RPS9A	O13516	197 aa	Known RBP	2.04	□□□□□ -2.08
YCS4	YLR272C	HSP60	P19882	572 aa	Known RBP	2.04	□□□□□ -2.08
YCS4	YLR272C	PPX1	P38698	397 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	DYS1	P38791	387 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	MBP1	P39678	833 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	FKH1	P40466	484 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	OPI10	Q08202	246 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	SHR5	P41912	237 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	HSV2	P50079	448 aa	Predicted RBP	2.04	□□□□□ -2.08
YCS4	YLR272C	BNI4	P53858	892 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	YNL011C	P53980	444 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	TFB2	Q02939	513 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	AGE1	Q04412	482 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	YCS4	Q06156	1176 aa		2.04	□□□□□ -2.08
YCS4	YLR272C	BUD21	Q08492	214 aa	Predicted RBP	2.04	□□□□□ -2.08
YCS4	YLR272C	KAP122	P32767	1081 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	PAN5	P38787	379 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	RTT106	P40161	455 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	PSY2	P40164	858 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	AIR1	P40507	360 aa	Known RBP	2.03	□□□□□ -2.08
YCS4	YLR272C	YGL176C	P46945	554 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	SOK2	P53438	785 aa	Predicted RBP	2.03	□□□□□ -2.08
YCS4	YLR272C	YLR125W	Q12138	136 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	MSN1	P22148	382 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	YKL069W	P36088	180 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	MRPL16	P38064	232 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	PEX28	P38848	579 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	NUG1	P40010	520 aa	Known RBP	2.03	□□□□□ -2.08
YCS4	YLR272C	AIM21	P40563	679 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	YJR142W	P47173	342 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	YGR122W	P53272	402 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	NSE3	Q05541	303 aa		2.03	□□□□□ -2.08
YCS4	YLR272C	TRL1	P09880	827 aa	Known RBP	2.03	□□□□□ -2.09
YCS4	YLR272C	NCL1	P38205	684 aa	Known RBP	2.03	□□□□□ -2.09
YCS4	YLR272C	GPB2	P39717	880 aa		2.03	□□□□□ -2.09
YCS4	YLR272C	DUS3	Q06053	668 aa	Known RBP	2.03	□□□□□ -2.09
YCS4	YLR272C	FLC1	Q08967	793 aa		2.03	□□□□□ -2.09
YCS4	YLR272C	IOC2	Q12072	812 aa		2.03	□□□□□ -2.09
YCS4	YLR272C	SUV3	P32580	737 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	SLN1	P39928	1220 aa	Predicted RBP	2.02	□□□□□ -2.09
YCS4	YLR272C	IOC3	P43596	787 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	COX18	P53239	316 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	DNM1	P54861	757 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	YLR346C	Q06139	101 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	RSB1	Q08417	382 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	RFA1	P22336	621 aa	Known RBP	2.02	□□□□□ -2.09
YCS4	YLR272C	FPR3	P38911	411 aa	Known RBP	2.02	□□□□□ -2.09
YCS4	YLR272C	CAB1	Q04430	367 aa		2.02	□□□□□ -2.09
YCS4	YLR272C	TIF6	Q12522	245 aa	Known RBP	2.02	□□□□□ -2.09
YCS4	YLR272C	YKL107W	P34251	309 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	PUS2	P53167	370 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	UTP22	P53254	1237 aa	Predicted RBP	2.01	□□□□□ -2.09
YCS4	YLR272C	ORC1	P54784	914 aa	Predicted RBP	2.01	□□□□□ -2.09
YCS4	YLR272C	ULP1	Q02724	621 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	YOR352W	Q08816	343 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	CIT1	P00890	479 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	HCA4	P20448	770 aa	Known RBP	2.01	□□□□□ -2.09
YCS4	YLR272C	RET1	P22276	1149 aa	Known RBP	2.01	□□□□□ -2.09
YCS4	YLR272C	MNR2	P35724	969 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	FOL1	P53848	824 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	ROD1	Q02805	837 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	TCB1	Q12466	1186 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	GCR1	P07261	785 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	PHO4	P07270	312 aa	Known RBP	2.01	□□□□□ -2.09
YCS4	YLR272C	KAR1	P11927	433 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	CYC8	P14922	966 aa		2.01	□□□□□ -2.09
YCS4	YLR272C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	2.01	□□□□□ -2.09	not detected
YCS4	YLR272C	YBR238C	P38330	731 aa	Known RBP	2.01	□□□□□ -2.09

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms