RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	DRS1	P32892	752 aa	Known RBP	4.54	□□□□□ -1.68
YCS4	YLR272C	FAP1	P53971	965 aa		4.14	□□□□□ -1.75
YCS4	YLR272C	BFR2	Q06631	534 aa	Known RBP	4.11	□□□□□ -1.75
YCS4	YLR272C	MTC1	P47018	478 aa	Known RBP	3.89	□□□□□ -1.79
YCS4	YLR272C	PRY3	P47033	881 aa		3.73	□□□□□ -1.81
YCS4	YLR272C	RQC2	Q12532	1038 aa	Known RBP	3.73	□□□□□ -1.81
YCS4	YLR272C	TFA1	P36100	482 aa		3.61	□□□□□ -1.83
YCS4	YLR272C	DIP2	Q12220	943 aa	Predicted RBP	3.61	□□□□□ -1.83
YCS4	YLR272C	PTP3	P40048	928 aa		3.54	□□□□□ -1.84
YCS4	YLR272C	REB1	P21538	810 aa		3.46	□□□□□ -1.86
YCS4	YLR272C	DMA1	P38823	416 aa		3.44	□□□□□ -1.86
YCS4	YLR272C	ISW2	Q08773	1120 aa		3.38	□□□□□ -1.87
YCS4	YLR272C	YAH1	Q12184	172 aa	Known RBP	3.38	□□□□□ -1.87
YCS4	YLR272C	RPL17A	P05740	184 aa	Known RBP	3.35	□□□□□ -1.87
YCS4	YLR272C	RPL17B	P46990	184 aa	Known RBP	3.35	□□□□□ -1.87
YCS4	YLR272C	RSE1	Q04693	1361 aa	Known RBP	3.35	□□□□□ -1.87
YCS4	YLR272C	RPG1	P38249	964 aa	Known RBP	3.33	□□□□□ -1.88
YCS4	YLR272C	TSR3	Q12094	313 aa	Known RBP	3.32	□□□□□ -1.88
YCS4	YLR272C	AVT3	P36062	692 aa		3.31	□□□□□ -1.88
YCS4	YLR272C	AAD16	Q02895	342 aa		3.28	□□□□□ -1.88
YCS4	YLR272C	MRPL32	P25348	183 aa		3.27	□□□□□ -1.89
YCS4	YLR272C	YIL055C	P40523	627 aa	Known RBP	3.2	□□□□□ -1.9
YCS4	YLR272C	TAF7	Q05021	590 aa		3.16	□□□□□ -1.9
YCS4	YLR272C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
YCS4	YLR272C	SPB4	P25808	606 aa	Predicted RBP	3.09	□□□□□ -1.92
YCS4	YLR272C	HAA1	Q12753	694 aa	Known RBP	3.09	□□□□□ -1.92
YCS4	YLR272C	SSP1	P38871	571 aa		3.07	□□□□□ -1.92
YCS4	YLR272C	DCD1	P06773	312 aa		3.01	□□□□□ -1.93
YCS4	YLR272C	HO	P09932	586 aa		3.01	□□□□□ -1.93
YCS4	YLR272C	DMA2	P53924	522 aa		2.99	□□□□□ -1.93
YCS4	YLR272C	GTT3	P39996	337 aa		2.96	□□□□□ -1.94
YCS4	YLR272C	VPS70	P47161	811 aa		2.96	□□□□□ -1.94
YCS4	YLR272C	PRI1	P10363	409 aa		2.92	□□□□□ -1.94
YCS4	YLR272C	PIB1	Q06651	286 aa		2.92	□□□□□ -1.94
YCS4	YLR272C	SCY1	P53009	804 aa		2.9	□□□□□ -1.94
YCS4	YLR272C	MIF2	P35201	549 aa		2.89	□□□□□ -1.95
YCS4	YLR272C	RSM7	P47150	247 aa		2.89	□□□□□ -1.95
YCS4	YLR272C	WSC3	Q12215	556 aa		2.89	□□□□□ -1.95
YCS4	YLR272C	CST9	Q06032	482 aa		2.88	□□□□□ -1.95
YCS4	YLR272C	YLR271W	Q06152	274 aa		2.88	□□□□□ -1.95
YCS4	YLR272C	MRM1	P25270	412 aa		2.87	□□□□□ -1.95
YCS4	YLR272C	BBC1	P47068	1157 aa		2.87	□□□□□ -1.95
YCS4	YLR272C	OXP1	P28273	1286 aa		2.85	□□□□□ -1.95
YCS4	YLR272C	LEO1	P38439	464 aa		2.85	□□□□□ -1.95
YCS4	YLR272C	RPL34B	P40525	121 aa	Known RBP	2.84	□□□□□ -1.96
YCS4	YLR272C	ATF2	P53296	535 aa		2.84	□□□□□ -1.96
YCS4	YLR272C	SIS1	P25294	352 aa	Known RBP	2.83	□□□□□ -1.96
YCS4	YLR272C	MGA2	P40578	1113 aa		2.83	□□□□□ -1.96
YCS4	YLR272C	YFR006W	P43590	535 aa		2.83	□□□□□ -1.96
YCS4	YLR272C	AI2	P03876	854 aa		2.82	□□□□□ -1.96
YCS4	YLR272C	GLC3	P32775	704 aa		2.81	□□□□□ -1.96
YCS4	YLR272C	YGL015C	P33199	130 aa		2.81	□□□□□ -1.96
YCS4	YLR272C	RIM101	P33400	625 aa		2.8	□□□□□ -1.96
YCS4	YLR272C	HGH1	P48362	394 aa	Known RBP	2.8	□□□□□ -1.96
YCS4	YLR272C	SLX5	P32828	619 aa	Known RBP	2.79	□□□□□ -1.96
YCS4	YLR272C	SET1	P38827	1080 aa	Known RBP	2.79	□□□□□ -1.96
YCS4	YLR272C	TIF4632	P39936	914 aa	Known RBP	2.78	□□□□□ -1.96
YCS4	YLR272C	RPN1	P38764	993 aa	Known RBP	2.77	□□□□□ -1.97
YCS4	YLR272C	RCR1	P38212	213 aa		2.76	□□□□□ -1.97
YCS4	YLR272C	SPT21	P35209	758 aa		2.75	□□□□□ -1.97
YCS4	YLR272C	KIC1	P38692	1080 aa		2.75	□□□□□ -1.97
YCS4	YLR272C	YJL007C	P47080	104 aa		2.75	□□□□□ -1.97
YCS4	YLR272C	IES2	P40154	320 aa		2.75	□□□□□ -1.97
YCS4	YLR272C	TFG1	P41895	735 aa	Predicted RBP	2.75	□□□□□ -1.97
YCS4	YLR272C	YJL171C	P46992	396 aa		2.74	□□□□□ -1.97
YCS4	YLR272C	PEX29	Q03370	554 aa		2.74	□□□□□ -1.97
YCS4	YLR272C	MAP2	P38174	421 aa	Known RBP	2.72	□□□□□ -1.97
YCS4	YLR272C	KTR7	P40504	517 aa		2.72	□□□□□ -1.97
YCS4	YLR272C	KIN1	P13185	1064 aa		2.72	□□□□□ -1.97
YCS4	YLR272C	YMR196W	Q04336	1088 aa		2.72	□□□□□ -1.97
YCS4	YLR272C	CDC27	P38042	758 aa		2.71	□□□□□ -1.98
YCS4	YLR272C	VHR2	P40041	505 aa		2.71	□□□□□ -1.98
YCS4	YLR272C	PBS2	P08018	668 aa		2.7	□□□□□ -1.98
YCS4	YLR272C	YKR023W	P36119	530 aa	Known RBP	2.7	□□□□□ -1.98
YCS4	YLR272C	BCH2	P36122	765 aa		2.7	□□□□□ -1.98
YCS4	YLR272C	YPR204W	Q08995	1032 aa		2.7	□□□□□ -1.98
YCS4	YLR272C	RAM2	P29703	316 aa		2.69	□□□□□ -1.98
YCS4	YLR272C	UBP9	P39967	754 aa		2.69	□□□□□ -1.98
YCS4	YLR272C	EPS1	P40557	701 aa		2.69	□□□□□ -1.98
YCS4	YLR272C	MAM3	Q12296	706 aa		2.69	□□□□□ -1.98
YCS4	YLR272C	TFC8	Q12308	588 aa		2.69	□□□□□ -1.98
YCS4	YLR272C	LEU3	P08638	886 aa		2.68	□□□□□ -1.98
YCS4	YLR272C	BRL1	P38770	471 aa		2.68	□□□□□ -1.98
YCS4	YLR272C	RPL34A	P87262	121 aa	Predicted RBP	2.68	□□□□□ -1.98
YCS4	YLR272C	RLF2	Q12495	606 aa		2.68	□□□□□ -1.98
YCS4	YLR272C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
YCS4	YLR272C	RTG3	P38165	486 aa		2.67	□□□□□ -1.98
YCS4	YLR272C	CKB1	P43639	278 aa		2.67	□□□□□ -1.98
YCS4	YLR272C	THI12	P42883	340 aa		2.67	□□□□□ -1.98
YCS4	YLR272C	THI5	P43534	340 aa		2.67	□□□□□ -1.98
YCS4	YLR272C	THI11	P47183	340 aa		2.67	□□□□□ -1.98
YCS4	YLR272C	THI13	Q07748	340 aa		2.67	□□□□□ -1.98
YCS4	YLR272C	DBP1	P24784	617 aa	Known RBP	2.66	□□□□□ -1.98
YCS4	YLR272C	YBL036C	P38197	257 aa		2.66	□□□□□ -1.98
YCS4	YLR272C	ATH1	P48016	1211 aa		2.66	□□□□□ -1.98
YCS4	YLR272C	COQ8	P27697	501 aa		2.65	□□□□□ -1.99
YCS4	YLR272C	TYW1	Q08960	810 aa	Known RBP	2.65	□□□□□ -1.99
YCS4	YLR272C	IFH1	P39520	1085 aa		2.65	□□□□□ -1.99
YCS4	YLR272C	DIT2	P21595	489 aa		2.64	□□□□□ -1.99
YCS4	YLR272C	DCW1	P36091	449 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms