RNA–Protein interactions for RNA: YKL060C

FBA1, Transcript of Fructose 1,6-bisphosphate aldolase, yeast

Gene FBA1, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FBA1	YKL060C	TIM50	Q02776	476 aa		7.39	□□□□□ -1.23
FBA1	YKL060C	RAT1	Q02792	1006 aa	Known RBP	7.39	□□□□□ -1.23
FBA1	YKL060C	SRC1	Q03707	834 aa		7.39	□□□□□ -1.23
FBA1	YKL060C	EST2	Q06163	884 aa		7.39	□□□□□ -1.23
FBA1	YKL060C	THI3	Q07471	609 aa		7.39	□□□□□ -1.23
FBA1	YKL060C	NOP58	Q12499	511 aa	Known RBP	7.39	□□□□□ -1.23
FBA1	YKL060C	SES1	P07284	462 aa	Known RBP	7.38	□□□□□ -1.23
FBA1	YKL060C	COQ1	P18900	473 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	CBP3	P21560	335 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	MGM1	P32266	881 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	SIS2	P36024	562 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	GRX7	P38068	203 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	RRM3	P38766	723 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	NUG1	P40010	520 aa	Known RBP	7.38	□□□□□ -1.23
FBA1	YKL060C	IOC3	P43596	787 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	IRC8	P47046	822 aa		7.38	□□□□□ -1.23
FBA1	YKL060C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.37	□□□□□ -1.23	not detected
FBA1	YKL060C	DIT2	P21595	489 aa		7.37	□□□□□ -1.23
FBA1	YKL060C	GSY2	P27472	705 aa		7.37	□□□□□ -1.23
FBA1	YKL060C	SRP40	P32583	406 aa	Predicted RBP	7.37	□□□□□ -1.23
FBA1	YKL060C	GEF1	P37020	779 aa		7.37	□□□□□ -1.23
FBA1	YKL060C	FYV10	P40492	516 aa		7.37	□□□□□ -1.23
FBA1	YKL060C	DPH6	Q12429	685 aa		7.37	□□□□□ -1.23
FBA1	YKL060C	FAS2	P19097	1887 aa	Known RBP	7.36	□□□□□ -1.23
FBA1	YKL060C	CYB2	P00175	591 aa		7.36	□□□□□ -1.23
FBA1	YKL060C	HSP82	P02829	709 aa	Known RBP	7.36	□□□□□ -1.23
FBA1	YKL060C	OXP1	P28273	1286 aa		7.36	□□□□□ -1.23
FBA1	YKL060C	YKT6	P36015	200 aa	Known RBP	7.36	□□□□□ -1.23
FBA1	YKL060C	ICP55	P40051	511 aa		7.36	□□□□□ -1.23
FBA1	YKL060C	VMS1	Q04311	632 aa	Known RBP	7.36	□□□□□ -1.23
FBA1	YKL060C	INM2	Q05533	292 aa		7.36	□□□□□ -1.23
FBA1	YKL060C	DIB1	Q06819	143 aa	Predicted RBP	7.36	□□□□□ -1.23
FBA1	YKL060C	BUG1	Q12191	341 aa		7.36	□□□□□ -1.23
FBA1	YKL060C	CHO2	P05374	869 aa	Known RBP	7.35	□□□□□ -1.23
FBA1	YKL060C	MCM4	P30665	933 aa	Known RBP	7.35	□□□□□ -1.23
FBA1	YKL060C	BCH2	P36122	765 aa		7.35	□□□□□ -1.23
FBA1	YKL060C	RPN10	P38886	268 aa	Known RBP	7.35	□□□□□ -1.23
FBA1	YKL060C	AKR1	P39010	764 aa		7.35	□□□□□ -1.23
FBA1	YKL060C	TPM2	P40414	161 aa		7.35	□□□□□ -1.23
FBA1	YKL060C	YIR042C	P40586	236 aa		7.35	□□□□□ -1.23
FBA1	YKL060C	UTP22	P53254	1237 aa	Predicted RBP	7.35	□□□□□ -1.23
FBA1	YKL060C	SYF1	Q04048	859 aa	Predicted RBP	7.35	□□□□□ -1.23
FBA1	YKL060C	CTI6	Q08923	506 aa		7.35	□□□□□ -1.23
FBA1	YKL060C	DCS2	Q12123	353 aa		7.35	□□□□□ -1.23
FBA1	YKL060C	SWI4	P25302	1093 aa	Known RBP	7.34	□□□□□ -1.23
FBA1	YKL060C	BMH2	P34730	273 aa	Known RBP	7.34	□□□□□ -1.23
FBA1	YKL060C	SPL2	P38839	148 aa		7.34	□□□□□ -1.23
FBA1	YKL060C	TFG2	P41896	400 aa	Predicted RBP	7.34	□□□□□ -1.23
FBA1	YKL060C	FAR11	P53917	953 aa		7.34	□□□□□ -1.23
FBA1	YKL060C	HDA1	P53973	706 aa		7.34	□□□□□ -1.23
FBA1	YKL060C	RPS15	Q01855	142 aa	Known RBP	7.34	□□□□□ -1.23
FBA1	YKL060C	HOS3	Q02959	697 aa	Known RBP	7.34	□□□□□ -1.23
FBA1	YKL060C	WAR1	Q03631	944 aa		7.34	□□□□□ -1.23
FBA1	YKL060C	HXK1	P04806	485 aa	Known RBP	7.33	□□□□□ -1.24
FBA1	YKL060C	RPL22A	P05749	121 aa	Known RBP	7.33	□□□□□ -1.24
FBA1	YKL060C	CDC6	P09119	513 aa		7.33	□□□□□ -1.24
FBA1	YKL060C	HCA4	P20448	770 aa	Known RBP	7.33	□□□□□ -1.24
FBA1	YKL060C	BUD31	P25337	157 aa	Predicted RBP	7.33	□□□□□ -1.24
FBA1	YKL060C	MNR2	P35724	969 aa		7.33	□□□□□ -1.24
FBA1	YKL060C	RRP8	P38961	392 aa	Known RBP	7.33	□□□□□ -1.24
FBA1	YKL060C	UFD2	P54860	961 aa		7.33	□□□□□ -1.24
FBA1	YKL060C	TFC6	Q06339	672 aa		7.33	□□□□□ -1.24
FBA1	YKL060C	FIG2	P25653	1609 aa		7.32	□□□□□ -1.24
FBA1	YKL060C	RGP1	P16664	663 aa		7.32	□□□□□ -1.24
FBA1	YKL060C	URA1	P28272	314 aa	Predicted RBP	7.32	□□□□□ -1.24
FBA1	YKL060C	MFT1	P33441	392 aa	Known RBP	7.32	□□□□□ -1.24
FBA1	YKL060C	RPN1	P38764	993 aa	Known RBP	7.32	□□□□□ -1.24
FBA1	YKL060C	NOC2	P39744	710 aa	Known RBP	7.32	□□□□□ -1.24
FBA1	YKL060C	PTK2	P47116	818 aa	Known RBP	7.32	□□□□□ -1.24
FBA1	YKL060C	BDF2	Q07442	638 aa		7.32	□□□□□ -1.24
FBA1	YKL060C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.32	□□□□□ -1.24	not detected
FBA1	YKL060C	VPS1	P21576	704 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	LCB1	P25045	558 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	ANP1	P32629	500 aa		7.31	□□□□□ -1.24
FBA1	YKL060C	SLX5	P32828	619 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	MYO3	P36006	1272 aa		7.31	□□□□□ -1.24
FBA1	YKL060C	BOI1	P38041	980 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	PSY4	P38193	441 aa		7.31	□□□□□ -1.24
FBA1	YKL060C	LEO1	P38439	464 aa		7.31	□□□□□ -1.24
FBA1	YKL060C	LYS4	P49367	693 aa	Predicted RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	CUE3	P53137	624 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	RPT4	P53549	437 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	IRC4	Q03036	179 aa		7.31	□□□□□ -1.24
FBA1	YKL060C	YMR074C	Q04773	145 aa		7.31	□□□□□ -1.24
FBA1	YKL060C	GET3	Q12154	354 aa	Known RBP	7.31	□□□□□ -1.24
FBA1	YKL060C	SSA2	P10592	639 aa	Known RBP	7.3	□□□□□ -1.24
FBA1	YKL060C	MCM3	P24279	971 aa	Known RBP	7.3	□□□□□ -1.24
FBA1	YKL060C	KRE2	P27809	442 aa		7.3	□□□□□ -1.24
FBA1	YKL060C	ASF1	P32447	279 aa		7.3	□□□□□ -1.24
FBA1	YKL060C	FRD1	P32614	470 aa	Known RBP	7.3	□□□□□ -1.24
FBA1	YKL060C	RPT3	P33298	428 aa	Known RBP	7.3	□□□□□ -1.24
FBA1	YKL060C	BDF1	P35817	686 aa		7.3	□□□□□ -1.24
FBA1	YKL060C	PTK1	P36002	662 aa	Predicted RBP	7.3	□□□□□ -1.24
FBA1	YKL060C	CEP3	P40969	608 aa		7.3	□□□□□ -1.24
FBA1	YKL060C	CTH1	P47976	325 aa		7.3	□□□□□ -1.24
FBA1	YKL060C	RIX7	Q07844	837 aa	Known RBP	7.3	□□□□□ -1.24
FBA1	YKL060C	MAL31	P38156	614 aa		7.29	□□□□□ -1.24
FBA1	YKL060C	TOS1	P38288	455 aa		7.29	□□□□□ -1.24
FBA1	YKL060C	YHL050C	P38721	697 aa		7.29	□□□□□ -1.24
FBA1	YKL060C	RTS1	P38903	757 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms