RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C CAF20P12962 161 aaKnown RBP8.83□□□□□ -1
SNP1YIL061C RER2P35196 286 aa8.83□□□□□ -1
SNP1YIL061C UGA2P38067 497 aa8.83□□□□□ -1
SNP1YIL061C MAL33P38157 468 aa8.83□□□□□ -1
SNP1YIL061C CCT5P40413 562 aaKnown RBP8.83□□□□□ -1
SNP1YIL061C RSC1P53236 928 aa8.83□□□□□ -1
SNP1YIL061C UBP10P53874 792 aaPredicted RBP8.83□□□□□ -1
SNP1YIL061C LCD1Q04377 747 aa8.83□□□□□ -1
SNP1YIL061C YPR148CQ06523 435 aa8.83□□□□□ -1
SNP1YIL061C PSF3Q12146 194 aa8.83□□□□□ -1
SNP1YIL061C RDS1P25611 832 aa8.82□□□□□ -1
SNP1YIL061C BOI1P38041 980 aaKnown RBP8.82□□□□□ -1
SNP1YIL061C YFH7P43591 353 aa8.82□□□□□ -1
SNP1YIL061C EST2Q06163 884 aa8.82□□□□□ -1
SNP1YIL061C PMD1P32634 1753 aa8.81□□□□□ -1
SNP1YIL061C MPH3P0CE00 602 aa8.81□□□□□ -1
SNP1YIL061C FRS2P15625 503 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C SMY1P32364 656 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C PTK1P36002 662 aaPredicted RBP8.81□□□□□ -1
SNP1YIL061C RFC5P38251 354 aa8.81□□□□□ -1
SNP1YIL061C ENT3P47160 408 aa8.81□□□□□ -1
SNP1YIL061C ETT1Q08421 412 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C DDP1Q99321 188 aaKnown RBP8.81□□□□□ -1
SNP1YIL061C CHO2P05374 869 aaKnown RBP8.8□□□□□ -1
SNP1YIL061C SNF3P10870 884 aa8.8□□□□□ -1
SNP1YIL061C SIS2P36024 562 aa8.8□□□□□ -1
SNP1YIL061C ERT1P38140 529 aa8.8□□□□□ -1
SNP1YIL061C BUD6P41697 788 aa8.8□□□□□ -1
SNP1YIL061C RPS15Q01855 142 aaKnown RBP8.8□□□□□ -1
SNP1YIL061C FAS2P19097 1887 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C PGI1P12709 554 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C CBP3P21560 335 aa8.79□□□□□ -1
SNP1YIL061C RPT3P33298 428 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C DID4P36108 232 aa8.79□□□□□ -1
SNP1YIL061C RRP8P38961 392 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C UFD2P54860 961 aa8.79□□□□□ -1
SNP1YIL061C WRS1Q12109 432 aaKnown RBP8.79□□□□□ -1
SNP1YIL061C PFK2P16862 959 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
SNP1YIL061C YGL015CP33199 130 aa8.78□□□□□ -1
SNP1YIL061C MYO3P36006 1272 aa8.78□□□□□ -1
SNP1YIL061C RFT1P38206 574 aaPredicted RBP8.78□□□□□ -1
SNP1YIL061C RTS1P38903 757 aa8.78□□□□□ -1
SNP1YIL061C EPL1P43572 832 aa8.78□□□□□ -1
SNP1YIL061C TAF13P11747 167 aa8.77□□□□□ -1.01
SNP1YIL061C DIT2P21595 489 aa8.77□□□□□ -1.01
SNP1YIL061C RET1P22276 1149 aaKnown RBP8.77□□□□□ -1.01
SNP1YIL061C YKL222CP35995 705 aa8.77□□□□□ -1.01
SNP1YIL061C YHL050CP38721 697 aa8.77□□□□□ -1.01
SNP1YIL061C JJJ2P46997 583 aa8.77□□□□□ -1.01
SNP1YIL061C TOS4Q06266 489 aa8.77□□□□□ -1.01
SNP1YIL061C HKR1P41809 1802 aa8.76□□□□□ -1.01
SNP1YIL061C ANP1P32629 500 aa8.76□□□□□ -1.01
SNP1YIL061C MDL2P33311 773 aa8.76□□□□□ -1.01
SNP1YIL061C BMH2P34730 273 aaKnown RBP8.76□□□□□ -1.01
SNP1YIL061C NPR3P38742 1146 aa8.76□□□□□ -1.01
SNP1YIL061C AKR1P39010 764 aa8.76□□□□□ -1.01
SNP1YIL061C SET4P42948 560 aa8.76□□□□□ -1.01
SNP1YIL061C FAR11P53917 953 aa8.76□□□□□ -1.01
SNP1YIL061C HDA1P53973 706 aa8.76□□□□□ -1.01
SNP1YIL061C TFC6Q06339 672 aa8.76□□□□□ -1.01
SNP1YIL061C GRX6Q12438 231 aa8.76□□□□□ -1.01
SNP1YIL061C RPN10P38886 268 aaKnown RBP8.75□□□□□ -1.01
SNP1YIL061C PTK2P47116 818 aaKnown RBP8.75□□□□□ -1.01
SNP1YIL061C YPT11P48559 417 aa8.75□□□□□ -1.01
SNP1YIL061C MSN5P52918 1224 aa8.75□□□□□ -1.01
SNP1YIL061C ARG82P07250 355 aa8.74□□□□□ -1.01
SNP1YIL061C SWI4P25302 1093 aaKnown RBP8.74□□□□□ -1.01
SNP1YIL061C MPE1P35728 441 aaKnown RBP8.74□□□□□ -1.01
SNP1YIL061C MRPL10P36520 322 aa8.74□□□□□ -1.01
SNP1YIL061C PIP2P52960 996 aa8.74□□□□□ -1.01
SNP1YIL061C PRP42Q03776 544 aaKnown RBP8.74□□□□□ -1.01
SNP1YIL061C RAD61Q99359 647 aa8.74□□□□□ -1.01
SNP1YIL061C TRS33Q99394 268 aa8.74□□□□□ -1.01
SNP1YIL061C FLO1P32768 1537 aa8.74□□□□□ -1.01
SNP1YIL061C HSP82P02829 709 aaKnown RBP8.73□□□□□ -1.01
SNP1YIL061C GPA1P08539 472 aa8.73□□□□□ -1.01
SNP1YIL061C MAK31P23059 88 aa8.73□□□□□ -1.01
SNP1YIL061C APL6P46682 809 aa8.73□□□□□ -1.01
SNP1YIL061C NSG2P53898 299 aa8.73□□□□□ -1.01
SNP1YIL061C MRD1Q06106 887 aaKnown RBP8.73□□□□□ -1.01
SNP1YIL061C DCS2Q12123 353 aa8.73□□□□□ -1.01
SNP1YIL061C ATE1P16639 503 aa8.72□□□□□ -1.01
SNP1YIL061C MCM2P29469 868 aa8.72□□□□□ -1.01
SNP1YIL061C ASF1P32447 279 aa8.72□□□□□ -1.01
SNP1YIL061C MIC60P36112 540 aa8.72□□□□□ -1.01
SNP1YIL061C MAL31P38156 614 aa8.72□□□□□ -1.01
SNP1YIL061C MYO5Q04439 1219 aaKnown RBP8.72□□□□□ -1.01
SNP1YIL061C GAS5Q08193 484 aa8.72□□□□□ -1.01
SNP1YIL061C YPL260WQ08977 551 aa8.72□□□□□ -1.01
SNP1YIL061C RPL22AP05749 121 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C CDC6P09119 513 aa8.71□□□□□ -1.02
SNP1YIL061C HCA4P20448 770 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C RNR3P21672 869 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C YKT6P36015 200 aaKnown RBP8.71□□□□□ -1.02
SNP1YIL061C YER130CP39959 443 aa8.71□□□□□ -1.02
SNP1YIL061C MSH4P40965 878 aaPredicted RBP8.71□□□□□ -1.02
SNP1YIL061C ALG2P43636 503 aa8.71□□□□□ -1.02
SNP1YIL061C SSL2Q00578 843 aa8.71□□□□□ -1.02
SNP1YIL061C KIN4Q01919 800 aa8.71□□□□□ -1.02
SNP1YIL061C SGD1Q06132 899 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms