RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W DCD1P06773 312 aa12.88□□□□□ -0.35
RTF1YGL244W SPT21P35209 758 aa12.88□□□□□ -0.35
RTF1YGL244W YKL133CP36066 463 aa12.88□□□□□ -0.35
RTF1YGL244W MET1P36150 593 aa12.88□□□□□ -0.35
RTF1YGL244W IES2P40154 320 aa12.88□□□□□ -0.35
RTF1YGL244W APT1P49435 187 aaKnown RBP12.88□□□□□ -0.35
RTF1YGL244W TMA16Q08687 178 aa12.88□□□□□ -0.35
RTF1YGL244W PHM7Q12252 991 aa12.88□□□□□ -0.35
RTF1YGL244W MPH3P0CE00 602 aa12.87□□□□□ -0.35
RTF1YGL244W PFK2P16862 959 aaKnown RBP RIP-Chip data12.87□□□□□ -0.35not detected
RTF1YGL244W CBP3P21560 335 aa12.86□□□□□ -0.35
RTF1YGL244W CAJ1P39101 391 aa12.86□□□□□ -0.35
RTF1YGL244W ALD3P54114 506 aa12.86□□□□□ -0.35
RTF1YGL244W SML1Q04964 104 aa12.86□□□□□ -0.35
RTF1YGL244W TAH18Q12181 623 aa12.86□□□□□ -0.35
RTF1YGL244W PDC1P06169 563 aaKnown RBP12.86□□□□□ -0.35
RTF1YGL244W PHO13P19881 312 aa12.86□□□□□ -0.35
RTF1YGL244W UBC1P21734 215 aaKnown RBP12.86□□□□□ -0.35
RTF1YGL244W MSH1P25846 959 aa12.86□□□□□ -0.35
RTF1YGL244W VPS41P38959 992 aa12.86□□□□□ -0.35
RTF1YGL244W HCR1Q05775 265 aaKnown RBP12.86□□□□□ -0.35
RTF1YGL244W MCM16Q12262 181 aa12.86□□□□□ -0.35
RTF1YGL244W SAC3P46674 1301 aa12.85□□□□□ -0.35
RTF1YGL244W CRG1P38892 291 aaRIP-Chip data12.85□□□□□ -0.35not detected
RTF1YGL244W ENP2P48234 707 aaKnown RBP12.85□□□□□ -0.35
RTF1YGL244W FAR11P53917 953 aa12.85□□□□□ -0.35
RTF1YGL244W RBA50Q04418 439 aa12.85□□□□□ -0.35
RTF1YGL244W EST2Q06163 884 aa12.85□□□□□ -0.35
RTF1YGL244W SPN1Q06505 410 aaPredicted RBP12.85□□□□□ -0.35
RTF1YGL244W RRI2Q12348 645 aa12.85□□□□□ -0.35
RTF1YGL244W HCA4P20448 770 aaKnown RBP12.84□□□□□ -0.35
RTF1YGL244W MVP1P40959 511 aaKnown RBP12.84□□□□□ -0.35
RTF1YGL244W RRB1Q04225 511 aaKnown RBP12.84□□□□□ -0.35
RTF1YGL244W RRP1P35178 278 aaPredicted RBP12.83□□□□□ -0.35
RTF1YGL244W RPN10P38886 268 aaKnown RBP12.83□□□□□ -0.35
RTF1YGL244W YGL140CP53120 1219 aa12.83□□□□□ -0.35
RTF1YGL244W RRP43P25359 394 aaPredicted RBP12.83□□□□□ -0.36
RTF1YGL244W DPB3P27344 201 aa12.83□□□□□ -0.36
RTF1YGL244W ADE17P38009 592 aaKnown RBP12.83□□□□□ -0.36
RTF1YGL244W REI1P38344 393 aaPredicted RBP12.83□□□□□ -0.36
RTF1YGL244W MGA2P40578 1113 aa12.83□□□□□ -0.36
RTF1YGL244W CAF130P53280 1122 aaPredicted RBP12.83□□□□□ -0.36
RTF1YGL244W ALF1P53904 254 aa12.83□□□□□ -0.36
RTF1YGL244W GFD1Q04839 188 aaKnown RBP12.83□□□□□ -0.36
RTF1YGL244W DCS2Q12123 353 aa12.83□□□□□ -0.36
RTF1YGL244W SAC6P32599 642 aaKnown RBP12.82□□□□□ -0.36
RTF1YGL244W SAP190P36123 1033 aa12.82□□□□□ -0.36
RTF1YGL244W RTT107P38850 1070 aa12.82□□□□□ -0.36
RTF1YGL244W NDC80P40460 691 aa12.82□□□□□ -0.36
RTF1YGL244W ADR1P07248 1323 aa12.82□□□□□ -0.36
RTF1YGL244W MSH3P25336 1018 aa12.81□□□□□ -0.36
RTF1YGL244W RER2P35196 286 aa12.81□□□□□ -0.36
RTF1YGL244W CUE3P53137 624 aaKnown RBP12.81□□□□□ -0.36
RTF1YGL244W VPS38Q05919 439 aa12.81□□□□□ -0.36
RTF1YGL244W PIF1P07271 859 aa12.8□□□□□ -0.36
RTF1YGL244W PXL1P36166 706 aa12.8□□□□□ -0.36
RTF1YGL244W AKR1P39010 764 aa12.8□□□□□ -0.36
RTF1YGL244W MAL13P53338 473 aa12.8□□□□□ -0.36
RTF1YGL244W URA1P28272 314 aaPredicted RBP12.8□□□□□ -0.36
RTF1YGL244W STO1P34160 861 aaKnown RBP12.8□□□□□ -0.36
RTF1YGL244W KAR5Q04746 504 aa12.8□□□□□ -0.36
RTF1YGL244W AFT2Q08957 416 aa12.8□□□□□ -0.36
RTF1YGL244W YEL043WP32618 956 aa12.79□□□□□ -0.36
RTF1YGL244W CCT4P39078 528 aaKnown RBP12.79□□□□□ -0.36
RTF1YGL244W GYL1Q04322 720 aa12.79□□□□□ -0.36
RTF1YGL244W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.79□□□□□ -0.36not detected
RTF1YGL244W GRX1P25373 110 aaKnown RBP12.78□□□□□ -0.36
RTF1YGL244W BMH2P34730 273 aaKnown RBP12.78□□□□□ -0.36
RTF1YGL244W GDT1P38301 280 aaPredicted RBP12.78□□□□□ -0.36
RTF1YGL244W HAL5P38970 855 aaKnown RBP12.78□□□□□ -0.36
RTF1YGL244W SEC9P40357 651 aa12.78□□□□□ -0.36
RTF1YGL244W YOL098CQ12496 1037 aa12.78□□□□□ -0.36
RTF1YGL244W YOL087CQ99247 1116 aa12.78□□□□□ -0.36
RTF1YGL244W SWI4P25302 1093 aaKnown RBP12.77□□□□□ -0.36
RTF1YGL244W ECM1P39715 212 aa12.77□□□□□ -0.36
RTF1YGL244W YMR102CQ03177 834 aa12.77□□□□□ -0.36
RTF1YGL244W PPM2Q08282 695 aa12.77□□□□□ -0.36
RTF1YGL244W GET3Q12154 354 aaKnown RBP12.77□□□□□ -0.36
RTF1YGL244W POM152P39685 1337 aa12.77□□□□□ -0.37
RTF1YGL244W CDC6P09119 513 aa12.77□□□□□ -0.37
RTF1YGL244W RPO26P20435 155 aa12.77□□□□□ -0.37
RTF1YGL244W MED8P38304 223 aa12.77□□□□□ -0.37
RTF1YGL244W IRC8P47046 822 aa12.77□□□□□ -0.37
RTF1YGL244W ENT1Q12518 454 aa12.77□□□□□ -0.37
RTF1YGL244W BMH1P29311 267 aaKnown RBP12.76□□□□□ -0.37
RTF1YGL244W ATG9Q12142 997 aa12.76□□□□□ -0.37
RTF1YGL244W FAS2P19097 1887 aaKnown RBP12.75□□□□□ -0.37
RTF1YGL244W REB1P21538 810 aa12.75□□□□□ -0.37
RTF1YGL244W SEC65P29478 273 aa12.75□□□□□ -0.37
RTF1YGL244W SER1P33330 395 aaKnown RBP12.75□□□□□ -0.37
RTF1YGL244W CSC1Q06538 782 aa12.75□□□□□ -0.37
RTF1YGL244W RRP8P38961 392 aaKnown RBP12.74□□□□□ -0.37
RTF1YGL244W CCC2P38995 1004 aa12.74□□□□□ -0.37
RTF1YGL244W DSN1P40568 576 aa12.74□□□□□ -0.37
RTF1YGL244W ATG23Q06671 453 aa12.74□□□□□ -0.37
RTF1YGL244W SSA2P10592 639 aaKnown RBP12.73□□□□□ -0.37
RTF1YGL244W VPS1P21576 704 aaKnown RBP12.73□□□□□ -0.37
RTF1YGL244W EFM2P38347 419 aa12.73□□□□□ -0.37
RTF1YGL244W FYV8P46949 817 aaKnown RBP12.73□□□□□ -0.37
RTF1YGL244W CTK3P46963 296 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms