RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	CUS1	Q02554	436 aa	Predicted RBP	7.06	□□□□□ -1.28
SKI8	YGL213C	GDE1	Q02979	1223 aa		7.06	□□□□□ -1.28
SKI8	YGL213C	EMG1	Q06287	252 aa	Known RBP	7.06	□□□□□ -1.28
SKI8	YGL213C	LEU1	P07264	779 aa	Known RBP	7.05	□□□□□ -1.28
SKI8	YGL213C	UGA4	P32837	571 aa		7.05	□□□□□ -1.28
SKI8	YGL213C	IOC3	P43596	787 aa		7.05	□□□□□ -1.28
SKI8	YGL213C	VTC4	P47075	721 aa		7.05	□□□□□ -1.28
SKI8	YGL213C	LSC2	P53312	427 aa		7.05	□□□□□ -1.28
SKI8	YGL213C	ULP1	Q02724	621 aa		7.05	□□□□□ -1.28
SKI8	YGL213C	YPL109C	Q02981	657 aa		7.05	□□□□□ -1.28
SKI8	YGL213C	CDC53	Q12018	815 aa	Known RBP	7.05	□□□□□ -1.28
SKI8	YGL213C	CDC34	P14682	295 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.04	□□□□□ -1.28	not detected
SKI8	YGL213C	YJR115W	P47152	169 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	NUT1	P53114	1132 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	CTR9	P89105	1077 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	ADI1	Q03677	179 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	NSE3	Q05541	303 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	YOR131C	Q12486	218 aa		7.04	□□□□□ -1.28
SKI8	YGL213C	PYC2	P32327	1180 aa	Known RBP	7.03	□□□□□ -1.28
SKI8	YGL213C	RVS167	P39743	482 aa	Known RBP	7.03	□□□□□ -1.28
SKI8	YGL213C	YIL165C	P40446	119 aa		7.03	□□□□□ -1.28
SKI8	YGL213C	YJR098C	P47139	656 aa		7.03	□□□□□ -1.28
SKI8	YGL213C	RGP1	P16664	663 aa		7.02	□□□□□ -1.29
SKI8	YGL213C	APM2	P38700	605 aa		7.02	□□□□□ -1.29
SKI8	YGL213C	NUP85	P46673	744 aa		7.02	□□□□□ -1.29
SKI8	YGL213C	FAA4	P47912	694 aa	Known RBP	7.02	□□□□□ -1.29
SKI8	YGL213C	SKP1	P52286	194 aa		7.02	□□□□□ -1.29
SKI8	YGL213C	COB	P00163	385 aa		7.01	□□□□□ -1.29
SKI8	YGL213C	PRI2	P20457	528 aa		7.01	□□□□□ -1.29
SKI8	YGL213C	GRX1	P25373	110 aa	Known RBP	7.01	□□□□□ -1.29
SKI8	YGL213C	SQT1	P35184	431 aa		7.01	□□□□□ -1.29
SKI8	YGL213C	RSM26	P47141	266 aa		7.01	□□□□□ -1.29
SKI8	YGL213C	ITC1	P53125	1264 aa		7.01	□□□□□ -1.29
SKI8	YGL213C	MSH6	Q03834	1242 aa		7.01	□□□□□ -1.29
SKI8	YGL213C	UBP15	P50101	1230 aa		7	□□□□□ -1.29
SKI8	YGL213C	PMT7	Q06644	662 aa		7	□□□□□ -1.29
SKI8	YGL213C	PIC2	P40035	300 aa		6.99	□□□□□ -1.29
SKI8	YGL213C	RPN4	Q03465	531 aa		6.99	□□□□□ -1.29
SKI8	YGL213C	TDA5	Q06417	326 aa	Known RBP	6.99	□□□□□ -1.29
SKI8	YGL213C	MRL1	Q06815	381 aa		6.99	□□□□□ -1.29
SKI8	YGL213C	RTT10	Q08924	1013 aa		6.99	□□□□□ -1.29
SKI8	YGL213C	TCB1	Q12466	1186 aa		6.99	□□□□□ -1.29
SKI8	YGL213C	GCR1	P07261	785 aa		6.98	□□□□□ -1.29
SKI8	YGL213C	CIT2	P08679	460 aa		6.98	□□□□□ -1.29
SKI8	YGL213C	NCL1	P38205	684 aa	Known RBP	6.98	□□□□□ -1.29
SKI8	YGL213C	YNR040W	P53736	256 aa		6.98	□□□□□ -1.29
SKI8	YGL213C	BDF2	Q07442	638 aa		6.98	□□□□□ -1.29
SKI8	YGL213C	OPI10	Q08202	246 aa		6.98	□□□□□ -1.29
SKI8	YGL213C	FAL1	Q12099	399 aa	Known RBP	6.98	□□□□□ -1.29
SKI8	YGL213C	RAD27	P26793	382 aa		6.97	□□□□□ -1.29
SKI8	YGL213C	DUR3	P33413	735 aa		6.97	□□□□□ -1.29
SKI8	YGL213C	RRP14	P36080	434 aa	Known RBP	6.97	□□□□□ -1.29
SKI8	YGL213C	YGR053C	P53234	283 aa		6.97	□□□□□ -1.29
SKI8	YGL213C	RPP1A	P05318	106 aa	Predicted RBP	6.96	□□□□□ -1.3
SKI8	YGL213C	MRPL16	P38064	232 aa		6.96	□□□□□ -1.3
SKI8	YGL213C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.96	□□□□□ -1.3	not detected
SKI8	YGL213C	XKS1	P42826	600 aa		6.96	□□□□□ -1.3
SKI8	YGL213C	NAN1	Q02931	896 aa	Known RBP	6.96	□□□□□ -1.3
SKI8	YGL213C	TMA46	Q12000	345 aa	Known RBP	6.96	□□□□□ -1.3
SKI8	YGL213C	TRK1	P12685	1235 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	RAD4	P14736	754 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	DUT1	P33317	147 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	SAP155	P43612	1002 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	TIM54	P47045	478 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	PPT1	P53043	513 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	HUL5	P53119	910 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	ALG12	P53730	551 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	PEX13	P80667	386 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	UBP2	Q01476	1272 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	RSC2	Q06488	889 aa		6.95	□□□□□ -1.3
SKI8	YGL213C	PEX28	P38848	579 aa		6.94	□□□□□ -1.3
SKI8	YGL213C	FPR3	P38911	411 aa	Known RBP	6.94	□□□□□ -1.3
SKI8	YGL213C	SPF1	P39986	1215 aa	Known RBP	6.94	□□□□□ -1.3
SKI8	YGL213C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.94	□□□□□ -1.3	not detected
SKI8	YGL213C	BAS1	P22035	811 aa		6.93	□□□□□ -1.3
SKI8	YGL213C	SHU2	P38957	223 aa		6.93	□□□□□ -1.3
SKI8	YGL213C	CCP1	P00431	361 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	NPR1	P22211	790 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	RIM11	P38615	370 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	TAT2	P38967	592 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	YER156C	P40093	338 aa	Known RBP	6.92	□□□□□ -1.3
SKI8	YGL213C	BUD6	P41697	788 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	YJL181W	P46987	611 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	YLR346C	Q06139	101 aa		6.92	□□□□□ -1.3
SKI8	YGL213C	CMR1	Q12510	522 aa	Known RBP	6.92	□□□□□ -1.3
SKI8	YGL213C	CDC19	P00549	500 aa	Known RBP	6.91	□□□□□ -1.3
SKI8	YGL213C	FUS1	P11710	512 aa		6.91	□□□□□ -1.3
SKI8	YGL213C	YKL069W	P36088	180 aa		6.91	□□□□□ -1.3
SKI8	YGL213C	KRI1	P42846	591 aa	Known RBP	6.91	□□□□□ -1.3
SKI8	YGL213C	YGL140C	P53120	1219 aa		6.91	□□□□□ -1.3
SKI8	YGL213C	KRE33	P53914	1056 aa	Known RBP	6.91	□□□□□ -1.3
SKI8	YGL213C	FAR11	P53917	953 aa		6.91	□□□□□ -1.3
SKI8	YGL213C	TAF13	P11747	167 aa		6.9	□□□□□ -1.3
SKI8	YGL213C	IDI1	P15496	288 aa		6.9	□□□□□ -1.3
SKI8	YGL213C	MSH3	P25336	1018 aa		6.9	□□□□□ -1.3
SKI8	YGL213C	TYW3	P53177	273 aa		6.9	□□□□□ -1.3
SKI8	YGL213C	EEB1	Q02891	456 aa		6.9	□□□□□ -1.3
SKI8	YGL213C	MET6	P05694	767 aa	Known RBP	6.89	□□□□□ -1.31
SKI8	YGL213C	SEC23	P15303	768 aa	Known RBP	6.89	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms