RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W MPH3P0CE00 602 aa7.61□□□□□ -1.19
RGD2YFL047W CBP3P21560 335 aa7.61□□□□□ -1.19
RGD2YFL047W GRX7P38068 203 aa7.61□□□□□ -1.19
RGD2YFL047W MSB4Q12317 492 aa7.61□□□□□ -1.19
RGD2YFL047W SFI1Q12369 946 aa7.61□□□□□ -1.19
RGD2YFL047W HCA4P20448 770 aaKnown RBP7.61□□□□□ -1.19
RGD2YFL047W RPN10P38886 268 aaKnown RBP7.61□□□□□ -1.19
RGD2YFL047W HDA1P53973 706 aa7.61□□□□□ -1.19
RGD2YFL047W THI3Q07471 609 aa7.61□□□□□ -1.19
RGD2YFL047W HXK1P04806 485 aaKnown RBP7.6□□□□□ -1.19
RGD2YFL047W CDC6P09119 513 aa7.6□□□□□ -1.19
RGD2YFL047W RGP1P16664 663 aa7.6□□□□□ -1.19
RGD2YFL047W VPS1P21576 704 aaKnown RBP7.6□□□□□ -1.19
RGD2YFL047W IRC8P47046 822 aa7.6□□□□□ -1.19
RGD2YFL047W STR2P47164 639 aa7.6□□□□□ -1.19
RGD2YFL047W TMA16Q08687 178 aa7.6□□□□□ -1.19
RGD2YFL047W TFG2P41896 400 aaPredicted RBP7.6□□□□□ -1.19
RGD2YFL047W PTK2P47116 818 aaKnown RBP7.6□□□□□ -1.19
RGD2YFL047W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
RGD2YFL047W LAM6Q08001 693 aa7.6□□□□□ -1.19
RGD2YFL047W SWI4P25302 1093 aaKnown RBP7.59□□□□□ -1.19
RGD2YFL047W MGM1P32266 881 aa7.59□□□□□ -1.19
RGD2YFL047W LTV1P34078 463 aa7.59□□□□□ -1.19
RGD2YFL047W TCD1P38756 429 aa7.59□□□□□ -1.19
RGD2YFL047W YIR042CP40586 236 aa7.59□□□□□ -1.19
RGD2YFL047W INM2Q05533 292 aa7.59□□□□□ -1.19
RGD2YFL047W APL4Q12028 832 aa7.59□□□□□ -1.19
RGD2YFL047W URA1P28272 314 aaPredicted RBP7.58□□□□□ -1.2
RGD2YFL047W SIS2P36024 562 aa7.58□□□□□ -1.2
RGD2YFL047W ENP2P48234 707 aaKnown RBP7.58□□□□□ -1.2
RGD2YFL047W SRC1Q03707 834 aa7.58□□□□□ -1.2
RGD2YFL047W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
RGD2YFL047W PCH2P38126 564 aa7.58□□□□□ -1.2
RGD2YFL047W IOC3P43596 787 aa7.58□□□□□ -1.2
RGD2YFL047W NPL4P33755 580 aa7.57□□□□□ -1.2
RGD2YFL047W BMH2P34730 273 aaKnown RBP7.57□□□□□ -1.2
RGD2YFL047W PXL1P36166 706 aa7.57□□□□□ -1.2
RGD2YFL047W RPS15Q01855 142 aaKnown RBP7.57□□□□□ -1.2
RGD2YFL047W TFC6Q06339 672 aa7.57□□□□□ -1.2
RGD2YFL047W RIM15P43565 1770 aa7.57□□□□□ -1.2
RGD2YFL047W CDC15P27636 974 aa7.57□□□□□ -1.2
RGD2YFL047W ICP55P40051 511 aa7.57□□□□□ -1.2
RGD2YFL047W OSW7P43611 510 aa7.57□□□□□ -1.2
RGD2YFL047W CUE3P53137 624 aaKnown RBP7.57□□□□□ -1.2
RGD2YFL047W VPS75P53853 264 aa7.57□□□□□ -1.2
RGD2YFL047W COG4Q06096 861 aa7.57□□□□□ -1.2
RGD2YFL047W GET3Q12154 354 aaKnown RBP7.57□□□□□ -1.2
RGD2YFL047W NPR2P39923 615 aa7.56□□□□□ -1.2
RGD2YFL047W RPN11P43588 306 aaKnown RBP7.56□□□□□ -1.2
RGD2YFL047W UFD2P54860 961 aa7.56□□□□□ -1.2
RGD2YFL047W CYB2P00175 591 aa7.55□□□□□ -1.2
RGD2YFL047W RPL22AP05749 121 aaKnown RBP7.55□□□□□ -1.2
RGD2YFL047W SPL2P38839 148 aa7.55□□□□□ -1.2
RGD2YFL047W NUG1P40010 520 aaKnown RBP7.55□□□□□ -1.2
RGD2YFL047W PTC5Q12511 572 aa7.55□□□□□ -1.2
RGD2YFL047W PDC1P06169 563 aaKnown RBP7.55□□□□□ -1.2
RGD2YFL047W PET111P08468 800 aa7.55□□□□□ -1.2
RGD2YFL047W SPC110P32380 944 aa7.55□□□□□ -1.2
RGD2YFL047W PRP40P33203 583 aaKnown RBP7.55□□□□□ -1.2
RGD2YFL047W RRP8P38961 392 aaKnown RBP7.55□□□□□ -1.2
RGD2YFL047W CIN4P39110 191 aa7.55□□□□□ -1.2
RGD2YFL047W MSH4P40965 878 aaPredicted RBP7.55□□□□□ -1.2
RGD2YFL047W FAR11P53917 953 aa7.55□□□□□ -1.2
RGD2YFL047W AFT2Q08957 416 aa7.55□□□□□ -1.2
RGD2YFL047W PHO13P19881 312 aa7.54□□□□□ -1.2
RGD2YFL047W ANP1P32629 500 aa7.54□□□□□ -1.2
RGD2YFL047W ALD2P47771 506 aa7.54□□□□□ -1.2
RGD2YFL047W PRP31P49704 494 aaPredicted RBP7.54□□□□□ -1.2
RGD2YFL047W RAT1Q02792 1006 aaKnown RBP7.54□□□□□ -1.2
RGD2YFL047W VPS60Q03390 229 aa7.54□□□□□ -1.2
RGD2YFL047W YCG1Q06680 1035 aa7.54□□□□□ -1.2
RGD2YFL047W DPH6Q12429 685 aa7.54□□□□□ -1.2
RGD2YFL047W RPT3P33298 428 aaKnown RBP7.54□□□□□ -1.2
RGD2YFL047W MYO3P36006 1272 aa7.54□□□□□ -1.2
RGD2YFL047W GEF1P37020 779 aa7.54□□□□□ -1.2
RGD2YFL047W PCI8P40512 444 aa7.54□□□□□ -1.2
RGD2YFL047W CSC1Q06538 782 aa7.54□□□□□ -1.2
RGD2YFL047W PET123P17558 318 aa7.53□□□□□ -1.2
RGD2YFL047W MCM3P24279 971 aaKnown RBP7.53□□□□□ -1.2
RGD2YFL047W BMH1P29311 267 aaKnown RBP7.53□□□□□ -1.2
RGD2YFL047W SAC6P32599 642 aaKnown RBP7.53□□□□□ -1.2
RGD2YFL047W ADE17P38009 592 aaKnown RBP7.53□□□□□ -1.2
RGD2YFL047W YHL050CP38721 697 aa7.53□□□□□ -1.2
RGD2YFL047W RTT107P38850 1070 aa7.53□□□□□ -1.2
RGD2YFL047W CSM2P40465 213 aa7.53□□□□□ -1.2
RGD2YFL047W SSA2P10592 639 aaKnown RBP7.52□□□□□ -1.2
RGD2YFL047W LCB1P25045 558 aaKnown RBP7.52□□□□□ -1.2
RGD2YFL047W RXT2P38255 430 aa7.52□□□□□ -1.2
RGD2YFL047W SYF1Q04048 859 aaPredicted RBP7.52□□□□□ -1.2
RGD2YFL047W YOR111WQ99210 232 aa7.52□□□□□ -1.2
RGD2YFL047W QCR6P00127 147 aa7.52□□□□□ -1.21
RGD2YFL047W MRC1P25588 1096 aa7.52□□□□□ -1.21
RGD2YFL047W PTK1P36002 662 aaPredicted RBP7.52□□□□□ -1.21
RGD2YFL047W SHM1P37292 490 aaPredicted RBP7.52□□□□□ -1.21
RGD2YFL047W BOI1P38041 980 aaKnown RBP7.52□□□□□ -1.21
RGD2YFL047W LYS14P40971 790 aa7.52□□□□□ -1.21
RGD2YFL047W EIS1Q05050 843 aaKnown RBP7.52□□□□□ -1.21
RGD2YFL047W MMR1Q06324 491 aa7.52□□□□□ -1.21
RGD2YFL047W MCM16Q12262 181 aa7.52□□□□□ -1.21
RGD2YFL047W RRP43P25359 394 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms