RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W SGS1P35187 1447 aa11.59□□□□□ -0.55
RGD2YFL047W INO80P53115 1489 aa11.22□□□□□ -0.61
RGD2YFL047W SPA2P23201 1466 aaKnown RBP11.2□□□□□ -0.62
RGD2YFL047W SSN2P38931 1420 aa11.18□□□□□ -0.62
RGD2YFL047W TCB3Q03640 1545 aaKnown RBP10.99□□□□□ -0.65
RGD2YFL047W DRS1P32892 752 aaKnown RBP10.84□□□□□ -0.67
RGD2YFL047W TY1B-DR4Q07793 1604 aa10.81□□□□□ -0.68
RGD2YFL047W HSL1P34244 1518 aa10.69□□□□□ -0.7
RGD2YFL047W SPT6P23615 1451 aaKnown RBP10.65□□□□□ -0.7
RGD2YFL047W MON2P48563 1636 aaPredicted RBP10.56□□□□□ -0.72
RGD2YFL047W HIR3P47171 1648 aa10.52□□□□□ -0.73
RGD2YFL047W SWR1Q05471 1514 aa10.5□□□□□ -0.73
RGD2YFL047W XRN1P22147 1528 aaKnown RBP10.5□□□□□ -0.73
RGD2YFL047W REV3P14284 1504 aa10.35□□□□□ -0.75
RGD2YFL047W SIN3P22579 1536 aa10.27□□□□□ -0.77
RGD2YFL047W TAF2P23255 1407 aa10.26□□□□□ -0.77
RGD2YFL047W THO2P53552 1597 aaKnown RBP10.22□□□□□ -0.77
RGD2YFL047W SSK2P53599 1579 aa10.22□□□□□ -0.77
RGD2YFL047W SKI3P17883 1432 aaKnown RBP10.17□□□□□ -0.78
RGD2YFL047W CHD1P32657 1468 aa10.12□□□□□ -0.79
RGD2YFL047W DNA2P38859 1522 aa10.11□□□□□ -0.79
RGD2YFL047W MMS22Q06164 1454 aa10.1□□□□□ -0.79
RGD2YFL047W ESP1Q03018 1630 aa10.08□□□□□ -0.8
RGD2YFL047W BUD4P47136 1447 aa10.06□□□□□ -0.8
RGD2YFL047W ECM5Q03214 1411 aa10.04□□□□□ -0.8
RGD2YFL047W MYO2P19524 1574 aaKnown RBP10.04□□□□□ -0.8
RGD2YFL047W POL1P13382 1468 aa10.04□□□□□ -0.8
RGD2YFL047W KOG1P38873 1557 aa10.03□□□□□ -0.8
RGD2YFL047W STU1P38198 1513 aa10.01□□□□□ -0.81
RGD2YFL047W ATG2P53855 1592 aa10□□□□□ -0.81
RGD2YFL047W YPK9Q12697 1472 aa9.99□□□□□ -0.81
RGD2YFL047W YTA7P40340 1379 aa9.96□□□□□ -0.82
RGD2YFL047W BPT1P14772 1559 aa9.92□□□□□ -0.82
RGD2YFL047W PEP1P32319 1579 aa9.9□□□□□ -0.82
RGD2YFL047W SAS10Q12136 610 aaPredicted RBP9.89□□□□□ -0.83
RGD2YFL047W SCC2Q04002 1493 aa9.88□□□□□ -0.83
RGD2YFL047W YOR1P53049 1477 aa9.86□□□□□ -0.83
RGD2YFL047W MDS3P53094 1487 aa9.85□□□□□ -0.83
RGD2YFL047W RPO31P04051 1460 aa9.85□□□□□ -0.83
RGD2YFL047W RKR1Q04781 1562 aa9.84□□□□□ -0.83
RGD2YFL047W RSE1Q04693 1361 aaKnown RBP9.84□□□□□ -0.83
RGD2YFL047W TOP2P06786 1428 aaKnown RBP9.8□□□□□ -0.84
RGD2YFL047W MYO4P32492 1471 aa9.8□□□□□ -0.84
RGD2YFL047W SMC4Q12267 1418 aa9.78□□□□□ -0.84
RGD2YFL047W TRM732Q03496 1420 aa9.78□□□□□ -0.84
RGD2YFL047W UFD4P33202 1483 aa9.77□□□□□ -0.85
RGD2YFL047W YCF1P39109 1515 aaKnown RBP9.76□□□□□ -0.85
RGD2YFL047W IKI3Q06706 1349 aaKnown RBP9.72□□□□□ -0.85
RGD2YFL047W SNQ2P32568 1501 aaKnown RBP9.7□□□□□ -0.86
RGD2YFL047W STH1P32597 1359 aa9.69□□□□□ -0.86
RGD2YFL047W TAF7Q05021 590 aa9.68□□□□□ -0.86
RGD2YFL047W TY2B-LR1P0C2J3 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-FP0CX63 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-GR2P0CX64 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-CP25384 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-DR2Q03494 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY1B-DR1Q03855 1755 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-DR3Q07791 1770 aaKnown RBP9.63□□□□□ -0.87
RGD2YFL047W TY2B-OR1Q12113 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-DR1Q12472 1770 aa9.63□□□□□ -0.87
RGD2YFL047W TY2B-OR2Q12501 1770 aa9.63□□□□□ -0.87
RGD2YFL047W SSM4P40318 1319 aa9.61□□□□□ -0.87
RGD2YFL047W TY1B-DR3Q99231 1755 aa9.61□□□□□ -0.87
RGD2YFL047W IFH1P39520 1085 aa9.59□□□□□ -0.87
RGD2YFL047W NUP170P38181 1502 aa9.58□□□□□ -0.88
RGD2YFL047W SPP41P38904 1435 aa9.57□□□□□ -0.88
RGD2YFL047W GEA1P47102 1408 aaPredicted RBP9.56□□□□□ -0.88
RGD2YFL047W PDR15Q04182 1529 aaKnown RBP9.55□□□□□ -0.88
RGD2YFL047W TY2B-BQ12491 1770 aa9.55□□□□□ -0.88
RGD2YFL047W RQC2Q12532 1038 aaKnown RBP9.52□□□□□ -0.89
RGD2YFL047W TSC11P40061 1430 aa9.5□□□□□ -0.89
RGD2YFL047W ULS1Q08562 1619 aa9.5□□□□□ -0.89
RGD2YFL047W MLP2P40457 1679 aa9.49□□□□□ -0.89
RGD2YFL047W SNT2P53127 1403 aa9.48□□□□□ -0.89
RGD2YFL047W VTH1P40438 1549 aa9.47□□□□□ -0.89
RGD2YFL047W VTH2P40890 1549 aa9.47□□□□□ -0.89
RGD2YFL047W TY1B-HO13535 1793 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-DR5P0C2I2 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-DR6P0C2I3 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-LR2P0C2I5 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-LR3P0C2I6 1755 aaKnown RBP9.46□□□□□ -0.9
RGD2YFL047W TY1B-PR1P0C2I9 1755 aaKnown RBP9.46□□□□□ -0.9
RGD2YFL047W TY1B-PR2P0C2J0 1756 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-PR3P0C2J1 1755 aaKnown RBP9.46□□□□□ -0.9
RGD2YFL047W TY1B-JR1P47098 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-ML2Q03434 1755 aaKnown RBP9.46□□□□□ -0.9
RGD2YFL047W TY1B-ER1Q03612 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-ML1Q04711 1755 aaKnown RBP9.46□□□□□ -0.9
RGD2YFL047W TY1B-GR2Q12269 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-OLQ12273 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-PLQ12414 1755 aaKnown RBP9.46□□□□□ -0.9
RGD2YFL047W TY1B-BRQ12193 1756 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-GR3Q12316 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY1B-ORQ92393 1755 aa9.46□□□□□ -0.9
RGD2YFL047W TY3B-GQ99315 1547 aa9.45□□□□□ -0.9
RGD2YFL047W PAN1P32521 1480 aa9.42□□□□□ -0.9
RGD2YFL047W CDC25P04821 1589 aa9.42□□□□□ -0.9
RGD2YFL047W NSR1P27476 414 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
RGD2YFL047W VPS15P22219 1454 aa9.39□□□□□ -0.91
RGD2YFL047W ESC1Q03661 1658 aaKnown RBP9.34□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms