RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeast

Gene RIB3, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIB3	YDR487C	YMR147W	P40218	223 aa	Known RBP	11.36	□□□□□ -0.59
RIB3	YDR487C	RMD1	Q03441	430 aa		11.36	□□□□□ -0.59
RIB3	YDR487C	SGD1	Q06132	899 aa		11.36	□□□□□ -0.59
RIB3	YDR487C	YDL124W	Q07551	312 aa	Known RBP	11.36	□□□□□ -0.59
RIB3	YDR487C	TUB2	P02557	457 aa	Known RBP	11.35	□□□□□ -0.59
RIB3	YDR487C	KIN1	P13185	1064 aa		11.35	□□□□□ -0.59
RIB3	YDR487C	NPL4	P33755	580 aa		11.35	□□□□□ -0.59
RIB3	YDR487C	RFC1	P38630	861 aa	Known RBP	11.35	□□□□□ -0.59
RIB3	YDR487C	SPR3	P41901	512 aa		11.35	□□□□□ -0.59
RIB3	YDR487C	IRC8	P47046	822 aa		11.35	□□□□□ -0.59
RIB3	YDR487C	ENP2	P48234	707 aa	Known RBP	11.35	□□□□□ -0.59
RIB3	YDR487C	SNU71	P53207	620 aa	Known RBP	11.35	□□□□□ -0.59
RIB3	YDR487C	EPS1	P40557	701 aa		11.34	□□□□□ -0.59
RIB3	YDR487C	IOC3	P43596	787 aa		11.34	□□□□□ -0.59
RIB3	YDR487C	PIB2	P53191	635 aa		11.33	□□□□□ -0.6
RIB3	YDR487C	YPL260W	Q08977	551 aa		11.33	□□□□□ -0.6
RIB3	YDR487C	FPR3	P38911	411 aa	Known RBP	11.32	□□□□□ -0.6
RIB3	YDR487C	NET1	P47035	1189 aa		11.32	□□□□□ -0.6
RIB3	YDR487C	YLR225C	Q05948	407 aa	Known RBP	11.32	□□□□□ -0.6
RIB3	YDR487C	BRE1	Q07457	700 aa	Known RBP	11.32	□□□□□ -0.6
RIB3	YDR487C	MCD4	P36051	919 aa		11.31	□□□□□ -0.6
RIB3	YDR487C	CST26	P38226	397 aa		11.31	□□□□□ -0.6
RIB3	YDR487C	LYS14	P40971	790 aa		11.31	□□□□□ -0.6
RIB3	YDR487C	MPH3	P0CE00	602 aa		11.3	□□□□□ -0.6
RIB3	YDR487C	IXR1	P33417	597 aa		11.3	□□□□□ -0.6
RIB3	YDR487C	OSH3	P38713	996 aa	Known RBP	11.3	□□□□□ -0.6
RIB3	YDR487C	LAP2	Q10740	671 aa		11.3	□□□□□ -0.6
RIB3	YDR487C	PRE8	P23639	250 aa		11.29	□□□□□ -0.6
RIB3	YDR487C	YDJ1	P25491	409 aa	Known RBP	11.29	□□□□□ -0.6
RIB3	YDR487C	ERG7	P38604	731 aa		11.29	□□□□□ -0.6
RIB3	YDR487C	VAB2	P40003	282 aa		11.29	□□□□□ -0.6
RIB3	YDR487C	MRPS35	P53292	345 aa		11.29	□□□□□ -0.6
RIB3	YDR487C	KAR5	Q04746	504 aa		11.29	□□□□□ -0.6
RIB3	YDR487C	SUB2	Q07478	446 aa	Known RBP	11.29	□□□□□ -0.6
RIB3	YDR487C	FLO1	P32768	1537 aa		11.29	□□□□□ -0.6
RIB3	YDR487C	FBP1	P09201	348 aa		11.28	□□□□□ -0.6
RIB3	YDR487C	CDC16	P09798	840 aa		11.28	□□□□□ -0.6
RIB3	YDR487C	KTR1	P27810	393 aa	Known RBP	11.28	□□□□□ -0.6
RIB3	YDR487C	RRP8	P38961	392 aa	Known RBP	11.28	□□□□□ -0.6
RIB3	YDR487C	SLN1	P39928	1220 aa	Predicted RBP	11.28	□□□□□ -0.6
RIB3	YDR487C	MRD1	Q06106	887 aa	Known RBP	11.28	□□□□□ -0.6
RIB3	YDR487C	CFT2	Q12102	859 aa	Predicted RBP	11.28	□□□□□ -0.6
RIB3	YDR487C	TAH18	Q12181	623 aa		11.28	□□□□□ -0.6
RIB3	YDR487C	GSC2	P40989	1895 aa		11.27	□□□□□ -0.6
RIB3	YDR487C	ERG12	P07277	443 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	KRS1	P15180	591 aa	Known RBP	11.26	□□□□□ -0.61
RIB3	YDR487C	SRM1	P21827	482 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	RTS1	P38903	757 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	STM1	P39015	273 aa	Known RBP	11.26	□□□□□ -0.61
RIB3	YDR487C	BBC1	P47068	1157 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	YJL007C	P47080	104 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	ATG1	P53104	897 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	NKP2	Q06162	153 aa		11.26	□□□□□ -0.61
RIB3	YDR487C	CDC60	P26637	1090 aa	Known RBP	11.25	□□□□□ -0.61
RIB3	YDR487C	PAM1	P37304	830 aa	Known RBP	11.25	□□□□□ -0.61
RIB3	YDR487C	PKH3	Q03306	898 aa	Predicted RBP	11.25	□□□□□ -0.61
RIB3	YDR487C	ECM16	Q04217	1267 aa	Known RBP	11.25	□□□□□ -0.61
RIB3	YDR487C	COQ1	P18900	473 aa		11.24	□□□□□ -0.61
RIB3	YDR487C	VID27	P40157	782 aa		11.24	□□□□□ -0.61
RIB3	YDR487C	PIB1	Q06651	286 aa		11.24	□□□□□ -0.61
RIB3	YDR487C	OPI1	P21957	404 aa		11.23	□□□□□ -0.61
RIB3	YDR487C	TIF4631	P39935	952 aa	Known RBP	11.23	□□□□□ -0.61
RIB3	YDR487C	TY3A-G	Q12173	290 aa		11.23	□□□□□ -0.61
RIB3	YDR487C	TY3A-I	Q99219	290 aa		11.23	□□□□□ -0.61
RIB3	YDR487C	RAD61	Q99359	647 aa		11.23	□□□□□ -0.61
RIB3	YDR487C	SRS2	P12954	1174 aa		11.22	□□□□□ -0.61
RIB3	YDR487C	MAC1	P35192	417 aa		11.22	□□□□□ -0.61
RIB3	YDR487C	MET1	P36150	593 aa		11.22	□□□□□ -0.61
RIB3	YDR487C	YHL050C	P38721	697 aa		11.22	□□□□□ -0.61
RIB3	YDR487C	LAM4	P38800	1345 aa		11.22	□□□□□ -0.61
RIB3	YDR487C	PSF2	P40359	213 aa		11.22	□□□□□ -0.61
RIB3	YDR487C	PER1	P25625	357 aa		11.21	□□□□□ -0.61
RIB3	YDR487C	SPB4	P25808	606 aa	Predicted RBP	11.21	□□□□□ -0.61
RIB3	YDR487C	VPS8	P39702	1274 aa		11.21	□□□□□ -0.61
RIB3	YDR487C	YML037C	Q03703	340 aa		11.21	□□□□□ -0.61
RIB3	YDR487C	SKG3	Q06315	1026 aa		11.21	□□□□□ -0.61
RIB3	YDR487C	CHO2	P05374	869 aa	Known RBP	11.2	□□□□□ -0.62
RIB3	YDR487C	VAS1	P07806	1104 aa	Known RBP	11.19	□□□□□ -0.62
RIB3	YDR487C	CHS3	P29465	1165 aa		11.19	□□□□□ -0.62
RIB3	YDR487C	PAH1	P32567	862 aa		11.19	□□□□□ -0.62
RIB3	YDR487C	RPS15	Q01855	142 aa	Known RBP	11.19	□□□□□ -0.62
RIB3	YDR487C	UBX5	Q06682	500 aa		11.19	□□□□□ -0.62
RIB3	YDR487C	VMA2	P16140	517 aa	Known RBP	11.18	□□□□□ -0.62
RIB3	YDR487C	ACE2	P21192	770 aa		11.18	□□□□□ -0.62
RIB3	YDR487C	YCK3	P39962	524 aa		11.18	□□□□□ -0.62
RIB3	YDR487C	UFD2	P54860	961 aa		11.18	□□□□□ -0.62
RIB3	YDR487C	ULP1	Q02724	621 aa		11.18	□□□□□ -0.62
RIB3	YDR487C	RIM20	Q12033	661 aa		11.18	□□□□□ -0.62
RIB3	YDR487C	PKC1	P24583	1151 aa		11.17	□□□□□ -0.62
RIB3	YDR487C	SOL4	P53315	255 aa		11.17	□□□□□ -0.62
RIB3	YDR487C	FPR4	Q06205	392 aa	Predicted RBP	11.17	□□□□□ -0.62
RIB3	YDR487C	SAM2	P19358	384 aa	Known RBP	11.16	□□□□□ -0.62
RIB3	YDR487C	DIT2	P21595	489 aa		11.16	□□□□□ -0.62
RIB3	YDR487C	SSF2	Q12153	453 aa	Predicted RBP	11.16	□□□□□ -0.62
RIB3	YDR487C	EUG1	P32474	517 aa		11.15	□□□□□ -0.62
RIB3	YDR487C	YAF9	P53930	226 aa		11.15	□□□□□ -0.62
RIB3	YDR487C	RAD50	P12753	1312 aa		11.14	□□□□□ -0.63
RIB3	YDR487C	RIT1	P23796	513 aa		11.14	□□□□□ -0.63
RIB3	YDR487C	PRO3	P32263	286 aa	Known RBP	11.14	□□□□□ -0.63
RIB3	YDR487C	UBP9	P39967	754 aa		11.14	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms