RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W RAD9P14737 1309 aa3.86□□□□□ -1.79
SIZ1YDR409W SRS2P12954 1174 aa3.86□□□□□ -1.79
SIZ1YDR409W RAD27P26793 382 aa3.86□□□□□ -1.79
SIZ1YDR409W HUL5P53119 910 aa3.86□□□□□ -1.79
SIZ1YDR409W PSR1Q07800 427 aa3.86□□□□□ -1.79
SIZ1YDR409W MIP1P15801 1254 aa3.85□□□□□ -1.79
SIZ1YDR409W SRP40P32583 406 aaPredicted RBP3.85□□□□□ -1.79
SIZ1YDR409W STE5P32917 917 aa3.85□□□□□ -1.79
SIZ1YDR409W RSC1P53236 928 aa3.85□□□□□ -1.79
SIZ1YDR409W RTT109Q07794 436 aa3.85□□□□□ -1.79
SIZ1YDR409W BDH2P39713 417 aa3.85□□□□□ -1.79
SIZ1YDR409W TMA64Q04600 565 aaKnown RBP3.85□□□□□ -1.79
SIZ1YDR409W KAR5Q04746 504 aa3.85□□□□□ -1.79
SIZ1YDR409W NUP145P49687 1317 aa3.85□□□□□ -1.79
SIZ1YDR409W ERR1P0CX10 437 aa3.84□□□□□ -1.79
SIZ1YDR409W ERR2P0CX11 437 aa3.84□□□□□ -1.79
SIZ1YDR409W KRE33P53914 1056 aaKnown RBP3.84□□□□□ -1.79
SIZ1YDR409W PKH3Q03306 898 aaPredicted RBP3.84□□□□□ -1.79
SIZ1YDR409W GRX1P25373 110 aaKnown RBP3.84□□□□□ -1.8
SIZ1YDR409W MAL31P38156 614 aa3.84□□□□□ -1.8
SIZ1YDR409W UBX7P38349 436 aa3.84□□□□□ -1.8
SIZ1YDR409W RRP8P38961 392 aaKnown RBP3.84□□□□□ -1.8
SIZ1YDR409W QDR1P40475 563 aa3.84□□□□□ -1.8
SIZ1YDR409W CIR1P42940 261 aa3.84□□□□□ -1.8
SIZ1YDR409W ACS2P52910 683 aaKnown RBP3.84□□□□□ -1.8
SIZ1YDR409W TAP42Q04372 366 aa3.84□□□□□ -1.8
SIZ1YDR409W PSK1P31374 1356 aa3.84□□□□□ -1.8
SIZ1YDR409W USO1P25386 1790 aa3.83□□□□□ -1.8
SIZ1YDR409W DPS1P04802 557 aaKnown RBP3.83□□□□□ -1.8
SIZ1YDR409W STI1P15705 589 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SIZ1YDR409W NMD3P38861 518 aaKnown RBP3.83□□□□□ -1.8
SIZ1YDR409W NUP82P40368 713 aa3.83□□□□□ -1.8
SIZ1YDR409W YGR021WP53212 290 aa3.83□□□□□ -1.8
SIZ1YDR409W COG8Q04632 607 aa3.83□□□□□ -1.8
SIZ1YDR409W PNP1Q05788 311 aa3.83□□□□□ -1.8
SIZ1YDR409W AUS1Q08409 1394 aa3.83□□□□□ -1.8
SIZ1YDR409W PUF4P25339 888 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SIZ1YDR409W RPL34BP40525 121 aaKnown RBP3.83□□□□□ -1.8
SIZ1YDR409W ACF4P47129 309 aa3.83□□□□□ -1.8
SIZ1YDR409W POB3Q04636 552 aaKnown RBP3.83□□□□□ -1.8
SIZ1YDR409W APC1P53886 1748 aa3.82□□□□□ -1.8
SIZ1YDR409W RPL8AP17076 256 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W VMA1P17255 1071 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W ISF1P32488 338 aa3.82□□□□□ -1.8
SIZ1YDR409W DLD1P32891 587 aa3.82□□□□□ -1.8
SIZ1YDR409W RGA1P39083 1007 aa3.82□□□□□ -1.8
SIZ1YDR409W YGR053CP53234 283 aa3.82□□□□□ -1.8
SIZ1YDR409W GCR2Q01722 534 aa3.82□□□□□ -1.8
SIZ1YDR409W MCM16Q12262 181 aa3.82□□□□□ -1.8
SIZ1YDR409W RAD50P12753 1312 aa3.82□□□□□ -1.8
SIZ1YDR409W DUR1,2P32528 1835 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W TRP5P00931 707 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W CYC8P14922 966 aa3.82□□□□□ -1.8
SIZ1YDR409W KAR2P16474 682 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W RPT2P40327 437 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W HYR1P40581 163 aaKnown RBP3.82□□□□□ -1.8
SIZ1YDR409W NPA3P47122 385 aa3.82□□□□□ -1.8
SIZ1YDR409W APC11Q12157 165 aa3.82□□□□□ -1.8
SIZ1YDR409W RRI2Q12348 645 aa3.82□□□□□ -1.8
SIZ1YDR409W CIT1P00890 479 aa3.81□□□□□ -1.8
SIZ1YDR409W KAR1P11927 433 aa3.81□□□□□ -1.8
SIZ1YDR409W RPN12P32496 274 aa3.81□□□□□ -1.8
SIZ1YDR409W VID27P40157 782 aa3.81□□□□□ -1.8
SIZ1YDR409W HST1P53685 503 aa3.81□□□□□ -1.8
SIZ1YDR409W NKP2Q06162 153 aa3.81□□□□□ -1.8
SIZ1YDR409W ERP4Q12450 207 aa3.81□□□□□ -1.8
SIZ1YDR409W LSO1Q3E827 93 aa3.81□□□□□ -1.8
SIZ1YDR409W ECM32P32644 1121 aaKnown RBP3.81□□□□□ -1.8
SIZ1YDR409W RPS0AP32905 252 aaKnown RBP3.81□□□□□ -1.8
SIZ1YDR409W TYS1P36421 394 aaKnown RBP3.81□□□□□ -1.8
SIZ1YDR409W RVS167P39743 482 aaKnown RBP3.81□□□□□ -1.8
SIZ1YDR409W BDP1P46678 594 aa3.81□□□□□ -1.8
SIZ1YDR409W HRQ1Q05549 1077 aa3.81□□□□□ -1.8
SIZ1YDR409W MMP1Q12372 583 aa3.81□□□□□ -1.8
SIZ1YDR409W NHA1Q99271 985 aa3.81□□□□□ -1.8
SIZ1YDR409W LYS2P07702 1392 aa3.8□□□□□ -1.8
SIZ1YDR409W APA1P16550 321 aaKnown RBP3.8□□□□□ -1.8
SIZ1YDR409W NPL4P33755 580 aa3.8□□□□□ -1.8
SIZ1YDR409W GPP1P41277 250 aaKnown RBP3.8□□□□□ -1.8
SIZ1YDR409W STU2P46675 888 aa3.8□□□□□ -1.8
SIZ1YDR409W SMC3P47037 1230 aa3.8□□□□□ -1.8
SIZ1YDR409W HOS3Q02959 697 aaKnown RBP3.8□□□□□ -1.8
SIZ1YDR409W HIM1Q06674 414 aa3.8□□□□□ -1.8
SIZ1YDR409W HXK1P04806 485 aaKnown RBP3.8□□□□□ -1.8
SIZ1YDR409W SPT5P27692 1063 aaKnown RBP3.8□□□□□ -1.8
SIZ1YDR409W RPT1P33299 467 aaKnown RBP3.8□□□□□ -1.8
SIZ1YDR409W TCD1P38756 429 aa3.8□□□□□ -1.8
SIZ1YDR409W RAD26P40352 1085 aa3.8□□□□□ -1.8
SIZ1YDR409W KTR7P40504 517 aa3.8□□□□□ -1.8
SIZ1YDR409W YJL049WP47048 450 aa3.8□□□□□ -1.8
SIZ1YDR409W YGL081WP53156 320 aa3.8□□□□□ -1.8
SIZ1YDR409W YNL034WP53963 612 aa3.8□□□□□ -1.8
SIZ1YDR409W YNL018CP53976 612 aa3.8□□□□□ -1.8
SIZ1YDR409W MKK2P32491 506 aa3.79□□□□□ -1.8
SIZ1YDR409W FAA3P39002 694 aa3.79□□□□□ -1.8
SIZ1YDR409W CIN4P39110 191 aa3.79□□□□□ -1.8
SIZ1YDR409W PFD1P46988 109 aa3.79□□□□□ -1.8
SIZ1YDR409W COG6P53959 839 aa3.79□□□□□ -1.8
SIZ1YDR409W ESC2Q06340 456 aa3.79□□□□□ -1.8
SIZ1YDR409W CDC53Q12018 815 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms