RNA–Protein interactions for RNA: YCR106W

RDS1, Transcript of Putative zinc cluster transcription factor, yeast

Gene RDS1, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDS1	YCR106W	KRI1	P42846	591 aa	Known RBP	4.23	□□□□□ -1.73
RDS1	YCR106W	NPA3	P47122	385 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	FPK1	P53739	893 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	MPH3	P0CE00	602 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	MATALPHA2	P0CY08	210 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	HMLALPHA2	P0CY09	210 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	MSM1	P22438	575 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	SLN1	P39928	1220 aa	Predicted RBP	4.23	□□□□□ -1.73
RDS1	YCR106W	MSH4	P40965	878 aa	Predicted RBP	4.23	□□□□□ -1.73
RDS1	YCR106W	YJL171C	P46992	396 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	PUS6	P53294	404 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	PCL8	Q08966	492 aa		4.23	□□□□□ -1.73
RDS1	YCR106W	RPL19A	P0CX82	189 aa	Known RBP	4.22	□□□□□ -1.73
RDS1	YCR106W	RPL19B	P0CX83	189 aa	Predicted RBP	4.22	□□□□□ -1.73
RDS1	YCR106W	FBP26	P32604	452 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	RPT3	P33298	428 aa	Known RBP	4.22	□□□□□ -1.73
RDS1	YCR106W	YKE2	P52553	114 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	UBP10	P53874	792 aa	Predicted RBP	4.22	□□□□□ -1.73
RDS1	YCR106W	VPS20	Q04272	221 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	HRQ1	Q05549	1077 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	GAS5	Q08193	484 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	RAD61	Q99359	647 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	RER2	P35196	286 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	HST1	P53685	503 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	EST2	Q06163	884 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	YPL260W	Q08977	551 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	YPL150W	Q12152	901 aa		4.22	□□□□□ -1.73
RDS1	YCR106W	SSA1	P10591	642 aa	Known RBP	4.21	□□□□□ -1.73
RDS1	YCR106W	BIK1	P11709	440 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	GLC3	P32775	704 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	MYO3	P36006	1272 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	YHL050C	P38721	697 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	GSM1	P42950	618 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	ALG2	P43636	503 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	FAR11	P53917	953 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	UFD2	P54860	961 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	YLR407W	Q06070	228 aa		4.21	□□□□□ -1.73
RDS1	YCR106W	CLF1	Q12309	687 aa	Predicted RBP	4.21	□□□□□ -1.73
RDS1	YCR106W	PGA3	Q12746	312 aa	Known RBP	4.21	□□□□□ -1.73
RDS1	YCR106W	GSC2	P40989	1895 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	TOP1	P04786	769 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	RPS7A	P26786	190 aa	Known RBP	4.21	□□□□□ -1.74
RDS1	YCR106W	IMP2'	P32351	346 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	ANP1	P32629	500 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	AFG2	P32794	780 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	ELM1	P32801	640 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	ESF1	Q06344	628 aa	Known RBP	4.21	□□□□□ -1.74
RDS1	YCR106W	ELG1	Q12050	791 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	AIM44	Q99299	758 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	FLO11	P08640	1367 aa		4.21	□□□□□ -1.74
RDS1	YCR106W	CBP3	P21560	335 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	ASF1	P32447	279 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	UTP7	P40055	554 aa	Known RBP	4.2	□□□□□ -1.74
RDS1	YCR106W	CIR1	P42940	261 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	CTF18	P49956	741 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	PEX14	P53112	341 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	KRE33	P53914	1056 aa	Known RBP	4.2	□□□□□ -1.74
RDS1	YCR106W	ARP5	P53946	755 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	TIM50	Q02776	476 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	COG8	Q04632	607 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	MRD1	Q06106	887 aa	Known RBP	4.2	□□□□□ -1.74
RDS1	YCR106W	CLC1	P17891	233 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	BMH2	P34730	273 aa	Known RBP	4.2	□□□□□ -1.74
RDS1	YCR106W	NSG2	P53898	299 aa		4.2	□□□□□ -1.74
RDS1	YCR106W	CHO2	P05374	869 aa	Known RBP	4.19	□□□□□ -1.74
RDS1	YCR106W	KEX1	P09620	729 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	PRX1	P34227	261 aa	Known RBP	4.19	□□□□□ -1.74
RDS1	YCR106W	VID27	P40157	782 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	DJP1	P40564	432 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	MTC3	P53077	123 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	MYO5	Q04439	1219 aa	Known RBP	4.19	□□□□□ -1.74
RDS1	YCR106W	KEL3	Q08979	651 aa	Predicted RBP	4.19	□□□□□ -1.74
RDS1	YCR106W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RDS1	YCR106W	MBR1	P23493	339 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	PRE8	P23639	250 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	SEC20	P28791	383 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	MAL31	P38156	614 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	VID28	P40547	921 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	YGR117C	P53270	476 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	SQS1	P53866	767 aa	Known RBP	4.19	□□□□□ -1.74
RDS1	YCR106W	SKG3	Q06315	1026 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	TFC6	Q06339	672 aa		4.19	□□□□□ -1.74
RDS1	YCR106W	YLR278C	Q05854	1341 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	CPA2	P03965	1118 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	PGI1	P12709	554 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	KIN1	P13185	1064 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	MAK31	P23059	88 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	RTG2	P32608	588 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	BUD6	P41697	788 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	SNU71	P53207	620 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	TRM44	Q02648	567 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	ETT1	Q08421	412 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	DIT2	P21595	489 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	RNR3	P21672	869 aa	Known RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	RFT1	P38206	574 aa	Predicted RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	SLI15	P38283	698 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	AKR1	P39010	764 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	SEN54	Q02825	467 aa	Predicted RBP	4.18	□□□□□ -1.74
RDS1	YCR106W	GDE1	Q02979	1223 aa		4.18	□□□□□ -1.74
RDS1	YCR106W	PEX19	Q07418	342 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 41 ms