RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C IXR1P33417 597 aa8.32□□□□□ -1.08
LDB7YBL006C YBL028CP38202 106 aa8.32□□□□□ -1.08
LDB7YBL006C NET1P47035 1189 aa8.32□□□□□ -1.08
LDB7YBL006C PIP2P52960 996 aa8.32□□□□□ -1.08
LDB7YBL006C NCB2Q92317 146 aa8.32□□□□□ -1.08
LDB7YBL006C RAD2P07276 1031 aa8.31□□□□□ -1.08
LDB7YBL006C YDJ1P25491 409 aaKnown RBP8.31□□□□□ -1.08
LDB7YBL006C OCT1P35999 772 aa8.31□□□□□ -1.08
LDB7YBL006C EPS1P40557 701 aa8.3□□□□□ -1.08
LDB7YBL006C YGL242CP53066 181 aa8.3□□□□□ -1.08
LDB7YBL006C SNU71P53207 620 aaKnown RBP8.3□□□□□ -1.08
LDB7YBL006C SPT21P35209 758 aa8.29□□□□□ -1.08
LDB7YBL006C YDL124WQ07551 312 aaKnown RBP8.29□□□□□ -1.08
LDB7YBL006C NOT3P06102 836 aaKnown RBP8.28□□□□□ -1.08
LDB7YBL006C CDC60P26637 1090 aaKnown RBP8.28□□□□□ -1.08
LDB7YBL006C GEF1P37020 779 aa8.28□□□□□ -1.08
LDB7YBL006C ULP1Q02724 621 aa8.28□□□□□ -1.08
LDB7YBL006C KEL3Q08979 651 aaPredicted RBP8.28□□□□□ -1.08
LDB7YBL006C CFT2Q12102 859 aaPredicted RBP8.28□□□□□ -1.08
LDB7YBL006C FBP1P09201 348 aa8.27□□□□□ -1.09
LDB7YBL006C MPH3P0CE00 602 aa8.27□□□□□ -1.09
LDB7YBL006C PAH1P32567 862 aa8.27□□□□□ -1.09
LDB7YBL006C NPL4P33755 580 aa8.27□□□□□ -1.09
LDB7YBL006C MCD4P36051 919 aa8.27□□□□□ -1.09
LDB7YBL006C TIF4631P39935 952 aaKnown RBP8.27□□□□□ -1.09
LDB7YBL006C YMR147WP40218 223 aaKnown RBP8.27□□□□□ -1.09
LDB7YBL006C PSF2P40359 213 aa8.27□□□□□ -1.09
LDB7YBL006C LYS14P40971 790 aa8.27□□□□□ -1.09
LDB7YBL006C POL32P47110 350 aa8.27□□□□□ -1.09
LDB7YBL006C ALO1P54783 526 aaKnown RBP8.27□□□□□ -1.09
LDB7YBL006C PUF6Q04373 656 aaKnown RBP8.27□□□□□ -1.09
LDB7YBL006C TY3A-GQ12173 290 aa8.27□□□□□ -1.09
LDB7YBL006C TY3A-IQ99219 290 aa8.27□□□□□ -1.09
LDB7YBL006C PRS1P32895 427 aaKnown RBP8.26□□□□□ -1.09
LDB7YBL006C MAL31P38156 614 aa8.26□□□□□ -1.09
LDB7YBL006C CST26P38226 397 aa8.26□□□□□ -1.09
LDB7YBL006C VAB2P40003 282 aa8.26□□□□□ -1.09
LDB7YBL006C BDP1P46678 594 aa8.26□□□□□ -1.09
LDB7YBL006C ATG1P53104 897 aa8.26□□□□□ -1.09
LDB7YBL006C MLC1P53141 149 aa8.26□□□□□ -1.09
LDB7YBL006C PDR18P53756 1333 aa8.26□□□□□ -1.09
LDB7YBL006C SPB4P25808 606 aaPredicted RBP8.25□□□□□ -1.09
LDB7YBL006C ECM21P38167 1117 aaKnown RBP8.25□□□□□ -1.09
LDB7YBL006C NMD2P38798 1089 aaKnown RBP8.25□□□□□ -1.09
LDB7YBL006C YJL007CP47080 104 aa8.25□□□□□ -1.09
LDB7YBL006C KAR5Q04746 504 aa8.25□□□□□ -1.09
LDB7YBL006C SUB2Q07478 446 aaKnown RBP8.25□□□□□ -1.09
LDB7YBL006C CDC27P38042 758 aa8.24□□□□□ -1.09
LDB7YBL006C IOC3P43596 787 aa8.24□□□□□ -1.09
LDB7YBL006C IRC8P47046 822 aa8.24□□□□□ -1.09
LDB7YBL006C YPL260WQ08977 551 aa8.24□□□□□ -1.09
LDB7YBL006C LAP2Q10740 671 aa8.24□□□□□ -1.09
LDB7YBL006C KRS1P15180 591 aaKnown RBP8.23□□□□□ -1.09
LDB7YBL006C PRE8P23639 250 aa8.23□□□□□ -1.09
LDB7YBL006C YHL050CP38721 697 aa8.23□□□□□ -1.09
LDB7YBL006C FUN12P39730 1002 aaKnown RBP8.23□□□□□ -1.09
LDB7YBL006C UBX5Q06682 500 aa8.23□□□□□ -1.09
LDB7YBL006C ECM29P38737 1868 aa8.22□□□□□ -1.09
LDB7YBL006C SRS2P12954 1174 aa8.22□□□□□ -1.09
LDB7YBL006C DIT2P21595 489 aa8.22□□□□□ -1.09
LDB7YBL006C SRM1P21827 482 aa8.22□□□□□ -1.09
LDB7YBL006C PER1P25625 357 aa8.22□□□□□ -1.09
LDB7YBL006C TFA1P36100 482 aa8.22□□□□□ -1.09
LDB7YBL006C PIB2P53191 635 aa8.22□□□□□ -1.09
LDB7YBL006C VPS62P53285 467 aa8.22□□□□□ -1.09
LDB7YBL006C PBY1P38254 753 aa8.21□□□□□ -1.1
LDB7YBL006C YML037CQ03703 340 aa8.21□□□□□ -1.1
LDB7YBL006C SKG3Q06315 1026 aa8.21□□□□□ -1.1
LDB7YBL006C ICL2Q12031 575 aa8.21□□□□□ -1.1
LDB7YBL006C ERG12P07277 443 aa8.2□□□□□ -1.1
LDB7YBL006C EUG1P32474 517 aa8.2□□□□□ -1.1
LDB7YBL006C BBC1P47068 1157 aa8.2□□□□□ -1.1
LDB7YBL006C MRPS35P53292 345 aa8.2□□□□□ -1.1
LDB7YBL006C PKH3Q03306 898 aaPredicted RBP8.2□□□□□ -1.1
LDB7YBL006C LAM4P38800 1345 aa8.2□□□□□ -1.1
LDB7YBL006C PKC1P24583 1151 aa8.19□□□□□ -1.1
LDB7YBL006C LDH1P38139 375 aa8.19□□□□□ -1.1
LDB7YBL006C OSH3P38713 996 aaKnown RBP8.19□□□□□ -1.1
LDB7YBL006C CHS3P29465 1165 aa8.18□□□□□ -1.1
LDB7YBL006C RTS1P38903 757 aa8.18□□□□□ -1.1
LDB7YBL006C ENP2P48234 707 aaKnown RBP8.18□□□□□ -1.1
LDB7YBL006C TAH18Q12181 623 aa8.18□□□□□ -1.1
LDB7YBL006C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
LDB7YBL006C TUS1Q06412 1307 aa8.18□□□□□ -1.1
LDB7YBL006C CDC16P09798 840 aa8.17□□□□□ -1.1
LDB7YBL006C VMA2P16140 517 aaKnown RBP8.17□□□□□ -1.1
LDB7YBL006C COQ1P18900 473 aa8.17□□□□□ -1.1
LDB7YBL006C YKR023WP36119 530 aaKnown RBP8.17□□□□□ -1.1
LDB7YBL006C MXR1P40029 184 aa8.17□□□□□ -1.1
LDB7YBL006C VID27P40157 782 aa8.17□□□□□ -1.1
LDB7YBL006C RMD1Q03441 430 aa8.17□□□□□ -1.1
LDB7YBL006C RAD61Q99359 647 aa8.17□□□□□ -1.1
LDB7YBL006C CHO2P05374 869 aaKnown RBP8.16□□□□□ -1.1
LDB7YBL006C PRE10P21242 288 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
LDB7YBL006C GPB2P39717 880 aa8.16□□□□□ -1.1
LDB7YBL006C CLA4P48562 842 aa8.16□□□□□ -1.1
LDB7YBL006C BRE5P53741 515 aaKnown RBP8.16□□□□□ -1.1
LDB7YBL006C ECM30Q06673 1274 aa8.16□□□□□ -1.1
LDB7YBL006C BRE1Q07457 700 aaKnown RBP8.16□□□□□ -1.1
LDB7YBL006C YOR131CQ12486 218 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms