RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W FRT1Q99332 602 aa7.3□□□□□ -1.24
SPO20YMR017W SEC20P28791 383 aa7.29□□□□□ -1.24
SPO20YMR017W IPL1P38991 367 aa7.29□□□□□ -1.24
SPO20YMR017W HXT8P40886 569 aa7.29□□□□□ -1.24
SPO20YMR017W MSC6Q08818 692 aaKnown RBP7.29□□□□□ -1.24
SPO20YMR017W RGP1P16664 663 aa7.28□□□□□ -1.24
SPO20YMR017W RPC31P17890 251 aa7.28□□□□□ -1.24
SPO20YMR017W ROG3P43602 733 aa7.28□□□□□ -1.24
SPO20YMR017W UFD2P54860 961 aa7.28□□□□□ -1.24
SPO20YMR017W TRS120Q04183 1289 aa7.28□□□□□ -1.24
SPO20YMR017W PPX1P38698 397 aa7.27□□□□□ -1.25
SPO20YMR017W TY1A-MR1Q04215 440 aa7.27□□□□□ -1.25
SPO20YMR017W STB3Q12427 513 aa7.27□□□□□ -1.25
SPO20YMR017W MSN1P22148 382 aa7.26□□□□□ -1.25
SPO20YMR017W CUS1Q02554 436 aaPredicted RBP7.26□□□□□ -1.25
SPO20YMR017W YOR296WQ08748 1289 aa7.26□□□□□ -1.25
SPO20YMR017W GAR1P28007 205 aaKnown RBP7.25□□□□□ -1.25
SPO20YMR017W SMC1P32908 1225 aa7.25□□□□□ -1.25
SPO20YMR017W MRPL16P38064 232 aa7.25□□□□□ -1.25
SPO20YMR017W BSD2P38356 321 aa7.25□□□□□ -1.25
SPO20YMR017W GIP1P38229 639 aa7.24□□□□□ -1.25
SPO20YMR017W ACO2P39533 789 aa7.24□□□□□ -1.25
SPO20YMR017W FIR1P40020 876 aa7.24□□□□□ -1.25
SPO20YMR017W YIR007WP40566 764 aa7.24□□□□□ -1.25
SPO20YMR017W SKP1P52286 194 aa7.24□□□□□ -1.25
SPO20YMR017W CAF120P53836 1060 aa7.24□□□□□ -1.25
SPO20YMR017W WHI5Q12416 295 aa7.24□□□□□ -1.25
SPO20YMR017W ISW1P38144 1129 aa7.23□□□□□ -1.25
SPO20YMR017W RAD55P38953 406 aa7.23□□□□□ -1.25
SPO20YMR017W THI12P42883 340 aa7.23□□□□□ -1.25
SPO20YMR017W THI5P43534 340 aa7.23□□□□□ -1.25
SPO20YMR017W THI11P47183 340 aa7.23□□□□□ -1.25
SPO20YMR017W THI13Q07748 340 aa7.23□□□□□ -1.25
SPO20YMR017W CCP1P00431 361 aa7.22□□□□□ -1.25
SPO20YMR017W DIT1P21623 536 aa7.22□□□□□ -1.25
SPO20YMR017W HEM3P28789 327 aa7.22□□□□□ -1.25
SPO20YMR017W NAB2P32505 525 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
SPO20YMR017W RGD2P43556 714 aa7.22□□□□□ -1.25
SPO20YMR017W CUZ1P53899 274 aa7.22□□□□□ -1.25
SPO20YMR017W YMR265CQ03508 461 aaKnown RBP7.22□□□□□ -1.25
SPO20YMR017W RPP1AP05318 106 aaPredicted RBP7.21□□□□□ -1.26
SPO20YMR017W NTA1P40354 457 aa7.21□□□□□ -1.26
SPO20YMR017W MNL2Q12205 849 aa7.21□□□□□ -1.26
SPO20YMR017W APM2P38700 605 aa7.2□□□□□ -1.26
SPO20YMR017W GPI13Q07830 1017 aa7.2□□□□□ -1.26
SPO20YMR017W TIF6Q12522 245 aaKnown RBP7.2□□□□□ -1.26
SPO20YMR017W NCL1P38205 684 aaKnown RBP7.19□□□□□ -1.26
SPO20YMR017W YBR287WP38355 427 aa7.19□□□□□ -1.26
SPO20YMR017W ITC1P53125 1264 aa7.19□□□□□ -1.26
SPO20YMR017W KRE33P53914 1056 aaKnown RBP7.19□□□□□ -1.26
SPO20YMR017W GBP2P25555 427 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
SPO20YMR017W MET4P32389 672 aa7.18□□□□□ -1.26
SPO20YMR017W IRS4P36115 615 aaKnown RBP7.18□□□□□ -1.26
SPO20YMR017W PSY2P40164 858 aa7.18□□□□□ -1.26
SPO20YMR017W YNR040WP53736 256 aa7.18□□□□□ -1.26
SPO20YMR017W YNL011CP53980 444 aa7.18□□□□□ -1.26
SPO20YMR017W YDL176WQ12027 708 aa7.18□□□□□ -1.26
SPO20YMR017W CDC55Q00362 526 aa7.17□□□□□ -1.26
SPO20YMR017W FPS1P23900 669 aa7.16□□□□□ -1.26
SPO20YMR017W CEM1P39525 442 aa7.16□□□□□ -1.26
SPO20YMR017W RSC4Q02206 625 aa7.16□□□□□ -1.26
SPO20YMR017W YDR461C-AQ2V2P7 80 aa7.16□□□□□ -1.26
SPO20YMR017W AIM46P38885 310 aa7.15□□□□□ -1.26
SPO20YMR017W POL32P47110 350 aa7.15□□□□□ -1.26
SPO20YMR017W ADE12P80210 433 aaKnown RBP7.15□□□□□ -1.26
SPO20YMR017W EMG1Q06287 252 aaKnown RBP7.15□□□□□ -1.26
SPO20YMR017W ASF1P32447 279 aa7.14□□□□□ -1.27
SPO20YMR017W MSC7P38694 644 aa7.14□□□□□ -1.27
SPO20YMR017W YIL165CP40446 119 aa7.14□□□□□ -1.27
SPO20YMR017W HEH2Q03281 663 aa7.14□□□□□ -1.27
SPO20YMR017W BSC2Q05611 235 aa7.14□□□□□ -1.27
SPO20YMR017W SYT1Q06836 1226 aa7.13□□□□□ -1.27
SPO20YMR017W PHO4P07270 312 aaKnown RBP7.12□□□□□ -1.27
SPO20YMR017W IDI1P15496 288 aa7.12□□□□□ -1.27
SPO20YMR017W YER156CP40093 338 aaKnown RBP7.12□□□□□ -1.27
SPO20YMR017W LYS5P50113 272 aa7.12□□□□□ -1.27
SPO20YMR017W RRP15Q06511 250 aaPredicted RBP7.12□□□□□ -1.27
SPO20YMR017W ATE1P16639 503 aa7.11□□□□□ -1.27
SPO20YMR017W GCD6P32501 712 aaKnown RBP7.11□□□□□ -1.27
SPO20YMR017W SAM37P50110 327 aa7.11□□□□□ -1.27
SPO20YMR017W TY1A-DR2Q03964 440 aaKnown RBP7.11□□□□□ -1.27
SPO20YMR017W PPT1P53043 513 aa7.1□□□□□ -1.27
SPO20YMR017W NOC3Q07896 663 aaPredicted RBP7.1□□□□□ -1.27
SPO20YMR017W RSC2Q06488 889 aa7.09□□□□□ -1.27
SPO20YMR017W MGE1P38523 228 aa7.08□□□□□ -1.28
SPO20YMR017W YHL008CP38750 627 aa7.08□□□□□ -1.28
SPO20YMR017W CIC1P38779 376 aaKnown RBP7.08□□□□□ -1.28
SPO20YMR017W PRK1P40494 810 aa7.08□□□□□ -1.28
SPO20YMR017W DAK2P43550 591 aa7.08□□□□□ -1.28
SPO20YMR017W RPT1P33299 467 aaKnown RBP7.07□□□□□ -1.28
SPO20YMR017W CTR9P89105 1077 aa7.07□□□□□ -1.28
SPO20YMR017W INP54Q08227 384 aaKnown RBP7.07□□□□□ -1.28
SPO20YMR017W PYC2P32327 1180 aaKnown RBP7.06□□□□□ -1.28
SPO20YMR017W VPS35P34110 944 aa7.06□□□□□ -1.28
SPO20YMR017W JJJ3P47138 172 aa7.06□□□□□ -1.28
SPO20YMR017W HPF1Q05164 967 aa7.06□□□□□ -1.28
SPO20YMR017W COBP00163 385 aa7.05□□□□□ -1.28
SPO20YMR017W FLP1P03870 423 aa7.05□□□□□ -1.28
SPO20YMR017W ECM2P38241 364 aaKnown RBP7.05□□□□□ -1.28
SPO20YMR017W YJL181WP46987 611 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms