RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W DRS1P32892 752 aaKnown RBP15.17■□□□□ 0.02
SPO20YMR017W MTC1P47018 478 aaKnown RBP15.12■□□□□ 0.01
SPO20YMR017W BFR2Q06631 534 aaKnown RBP13.11□□□□□ -0.31
SPO20YMR017W DIP2Q12220 943 aaPredicted RBP12.91□□□□□ -0.34
SPO20YMR017W AVT3P36062 692 aa12.73□□□□□ -0.37
SPO20YMR017W FAP1P53971 965 aa12.44□□□□□ -0.42
SPO20YMR017W TFA1P36100 482 aa12.3□□□□□ -0.44
SPO20YMR017W ISW2Q08773 1120 aa12.3□□□□□ -0.44
SPO20YMR017W RSE1Q04693 1361 aaKnown RBP12.19□□□□□ -0.46
SPO20YMR017W PRI1P10363 409 aa12.14□□□□□ -0.47
SPO20YMR017W RPG1P38249 964 aaKnown RBP12.13□□□□□ -0.47
SPO20YMR017W AAD16Q02895 342 aa11.93□□□□□ -0.5
SPO20YMR017W RPL17AP05740 184 aaKnown RBP11.74□□□□□ -0.53
SPO20YMR017W RPL17BP46990 184 aaKnown RBP11.74□□□□□ -0.53
SPO20YMR017W PRY3P47033 881 aa11.64□□□□□ -0.55
SPO20YMR017W REB1P21538 810 aa11.6□□□□□ -0.55
SPO20YMR017W TSR3Q12094 313 aaKnown RBP11.55□□□□□ -0.56
SPO20YMR017W SPT21P35209 758 aa11.31□□□□□ -0.6
SPO20YMR017W RIM101P33400 625 aa11.14□□□□□ -0.63
SPO20YMR017W MRPL32P25348 183 aa11.08□□□□□ -0.64
SPO20YMR017W YCK3P39962 524 aa11□□□□□ -0.65
SPO20YMR017W HAA1Q12753 694 aaKnown RBP10.96□□□□□ -0.65
SPO20YMR017W YKR023WP36119 530 aaKnown RBP10.93□□□□□ -0.66
SPO20YMR017W OXP1P28273 1286 aa10.79□□□□□ -0.68
SPO20YMR017W PTP3P40048 928 aa10.76□□□□□ -0.69
SPO20YMR017W HOP09932 586 aa10.72□□□□□ -0.69
SPO20YMR017W CDC27P38042 758 aa10.72□□□□□ -0.69
SPO20YMR017W TFC8Q12308 588 aa10.72□□□□□ -0.69
SPO20YMR017W DCD1P06773 312 aa10.65□□□□□ -0.7
SPO20YMR017W YAH1Q12184 172 aaKnown RBP10.65□□□□□ -0.7
SPO20YMR017W YIL055CP40523 627 aaKnown RBP10.64□□□□□ -0.71
SPO20YMR017W SSP1P38871 571 aa10.63□□□□□ -0.71
SPO20YMR017W YLR271WQ06152 274 aa10.49□□□□□ -0.73
SPO20YMR017W RSM7P47150 247 aa10.48□□□□□ -0.73
SPO20YMR017W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.47□□□□□ -0.73not detected
SPO20YMR017W BCH2P36122 765 aa10.4□□□□□ -0.74
SPO20YMR017W RQC2Q12532 1038 aaKnown RBP10.4□□□□□ -0.74
SPO20YMR017W YGL015CP33199 130 aa10.32□□□□□ -0.76
SPO20YMR017W AI2P03876 854 aa10.3□□□□□ -0.76
SPO20YMR017W UBP10P53874 792 aaPredicted RBP10.29□□□□□ -0.76
SPO20YMR017W MAP2P38174 421 aaKnown RBP10.27□□□□□ -0.77
SPO20YMR017W MGA2P40578 1113 aa10.26□□□□□ -0.77
SPO20YMR017W SCY1P53009 804 aa10.26□□□□□ -0.77
SPO20YMR017W EPS1P40557 701 aa10.24□□□□□ -0.77
SPO20YMR017W BBC1P47068 1157 aa10.24□□□□□ -0.77
SPO20YMR017W PSD2P53037 1138 aaKnown RBP10.22□□□□□ -0.77
SPO20YMR017W CST9Q06032 482 aa10.19□□□□□ -0.78
SPO20YMR017W BDF1P35817 686 aa10.15□□□□□ -0.78
SPO20YMR017W DMA1P38823 416 aa10.13□□□□□ -0.79
SPO20YMR017W SLX5P32828 619 aaKnown RBP10.06□□□□□ -0.8
SPO20YMR017W MRM1P25270 412 aa10□□□□□ -0.81
SPO20YMR017W TIF4632P39936 914 aaKnown RBP9.86□□□□□ -0.83
SPO20YMR017W RTG3P38165 486 aa9.84□□□□□ -0.83
SPO20YMR017W RCR1P38212 213 aa9.84□□□□□ -0.83
SPO20YMR017W RAM2P29703 316 aa9.81□□□□□ -0.84
SPO20YMR017W TGL3P40308 642 aa9.76□□□□□ -0.85
SPO20YMR017W VPS29P38759 282 aa9.73□□□□□ -0.85
SPO20YMR017W NSR1P27476 414 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
SPO20YMR017W YMR1P47147 688 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
SPO20YMR017W MAK11P20484 414 aaKnown RBP9.66□□□□□ -0.86
SPO20YMR017W YOR238WQ08634 303 aa9.63□□□□□ -0.87
SPO20YMR017W YAP5P40574 245 aa9.62□□□□□ -0.87
SPO20YMR017W STS1P38637 319 aa9.61□□□□□ -0.87
SPO20YMR017W DBP1P24784 617 aaKnown RBP9.6□□□□□ -0.87
SPO20YMR017W YFR006WP43590 535 aa9.59□□□□□ -0.87
SPO20YMR017W SET1P38827 1080 aaKnown RBP9.58□□□□□ -0.88
SPO20YMR017W SAS10Q12136 610 aaPredicted RBP9.58□□□□□ -0.88
SPO20YMR017W PIB1Q06651 286 aa9.55□□□□□ -0.88
SPO20YMR017W COQ8P27697 501 aa9.53□□□□□ -0.88
SPO20YMR017W MIF2P35201 549 aa9.49□□□□□ -0.89
SPO20YMR017W MST1P07236 462 aa9.47□□□□□ -0.89
SPO20YMR017W EDS1P38073 919 aa9.45□□□□□ -0.9
SPO20YMR017W IFH1P39520 1085 aa9.44□□□□□ -0.9
SPO20YMR017W YPR148CQ06523 435 aa9.44□□□□□ -0.9
SPO20YMR017W VMA1P17255 1071 aaKnown RBP9.43□□□□□ -0.9
SPO20YMR017W NOP53Q12080 455 aaKnown RBP9.4□□□□□ -0.9
SPO20YMR017W GTT3P39996 337 aa9.39□□□□□ -0.91
SPO20YMR017W VPS70P47161 811 aa9.39□□□□□ -0.91
SPO20YMR017W PTC3P34221 468 aaKnown RBP9.37□□□□□ -0.91
SPO20YMR017W CKB1P43639 278 aa9.32□□□□□ -0.92
SPO20YMR017W SAM3Q08986 587 aa9.32□□□□□ -0.92
SPO20YMR017W GRE2Q12068 342 aaKnown RBP9.28□□□□□ -0.92
SPO20YMR017W ATH1P48016 1211 aa9.26□□□□□ -0.93
SPO20YMR017W LEU3P08638 886 aa9.25□□□□□ -0.93
SPO20YMR017W YOL036WQ08206 761 aa9.25□□□□□ -0.93
SPO20YMR017W GYP5Q12344 894 aa9.25□□□□□ -0.93
SPO20YMR017W GUT1P32190 709 aa9.23□□□□□ -0.93
SPO20YMR017W WSC3Q12215 556 aa9.23□□□□□ -0.93
SPO20YMR017W SPB4P25808 606 aaPredicted RBP9.22□□□□□ -0.93
SPO20YMR017W SET4P42948 560 aa9.22□□□□□ -0.93
SPO20YMR017W YBL029C-AQ3E756 94 aa9.19□□□□□ -0.94
SPO20YMR017W REF2P42073 533 aaPredicted RBP9.18□□□□□ -0.94
SPO20YMR017W MSB4Q12317 492 aa9.18□□□□□ -0.94
SPO20YMR017W PBS2P08018 668 aa9.17□□□□□ -0.94
SPO20YMR017W ABP1P15891 592 aaKnown RBP9.17□□□□□ -0.94
SPO20YMR017W DCW1P36091 449 aa9.16□□□□□ -0.94
SPO20YMR017W UBP9P39967 754 aa9.16□□□□□ -0.94
SPO20YMR017W DSF2P38213 736 aa9.13□□□□□ -0.95
SPO20YMR017W VNX1P42839 908 aa9.13□□□□□ -0.95
SPO20YMR017W HTA1P04911 132 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms