RNA–Protein interactions for RNA: YEL058W

PCM1, Transcript of Essential N-acetylglucosamine-phosphate mutase, yeast

Gene PCM1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCM1	YEL058W	PMD1	P32634	1753 aa		13.42	□□□□□ -0.26
PCM1	YEL058W	YKL222C	P35995	705 aa		13.41	□□□□□ -0.26
PCM1	YEL058W	CWH41	P53008	833 aa		13.41	□□□□□ -0.26
PCM1	YEL058W	YMR147W	P40218	223 aa	Known RBP	13.4	□□□□□ -0.26
PCM1	YEL058W	EAF6	P47128	113 aa		13.4	□□□□□ -0.26
PCM1	YEL058W	OPI1	P21957	404 aa		13.39	□□□□□ -0.27
PCM1	YEL058W	YIR042C	P40586	236 aa		13.39	□□□□□ -0.27
PCM1	YEL058W	IRC4	Q03036	179 aa		13.39	□□□□□ -0.27
PCM1	YEL058W	SRS2	P12954	1174 aa		13.38	□□□□□ -0.27
PCM1	YEL058W	LCB1	P25045	558 aa	Known RBP	13.38	□□□□□ -0.27
PCM1	YEL058W	BBC1	P47068	1157 aa		13.38	□□□□□ -0.27
PCM1	YEL058W	INM2	Q05533	292 aa		13.38	□□□□□ -0.27
PCM1	YEL058W	RNR2	P09938	399 aa	Known RBP	13.37	□□□□□ -0.27
PCM1	YEL058W	PKH3	Q03306	898 aa	Predicted RBP	13.37	□□□□□ -0.27
PCM1	YEL058W	LAM4	P38800	1345 aa		13.36	□□□□□ -0.27
PCM1	YEL058W	CTT1	P06115	562 aa		13.36	□□□□□ -0.27
PCM1	YEL058W	RET1	P22276	1149 aa	Known RBP	13.36	□□□□□ -0.27
PCM1	YEL058W	KRI1	P42846	591 aa	Known RBP	13.36	□□□□□ -0.27
PCM1	YEL058W	UBX2	Q04228	584 aa		13.36	□□□□□ -0.27
PCM1	YEL058W	TPM1	P17536	199 aa	Known RBP	13.35	□□□□□ -0.27
PCM1	YEL058W	GRX7	P38068	203 aa		13.35	□□□□□ -0.27
PCM1	YEL058W	AIM9	P40053	627 aa	Known RBP	13.35	□□□□□ -0.27
PCM1	YEL058W	DUR1,2	P32528	1835 aa	Known RBP	13.35	□□□□□ -0.27
PCM1	YEL058W	RPT3	P33298	428 aa	Known RBP	13.34	□□□□□ -0.27
PCM1	YEL058W	KIN4	Q01919	800 aa		13.34	□□□□□ -0.27
PCM1	YEL058W	KAR5	Q04746	504 aa		13.34	□□□□□ -0.27
PCM1	YEL058W	TAH18	Q12181	623 aa		13.34	□□□□□ -0.27
PCM1	YEL058W	GRX6	Q12438	231 aa		13.34	□□□□□ -0.27
PCM1	YEL058W	CYB2	P00175	591 aa		13.33	□□□□□ -0.28
PCM1	YEL058W	SET4	P42948	560 aa		13.33	□□□□□ -0.28
PCM1	YEL058W	VPS24	P36095	224 aa	Known RBP	13.32	□□□□□ -0.28
PCM1	YEL058W	CIC1	P38779	376 aa	Known RBP	13.32	□□□□□ -0.28
PCM1	YEL058W	SPO22	P40511	975 aa		13.32	□□□□□ -0.28
PCM1	YEL058W	YFH7	P43591	353 aa		13.32	□□□□□ -0.28
PCM1	YEL058W	ENP2	P48234	707 aa	Known RBP	13.32	□□□□□ -0.28
PCM1	YEL058W	LSP1	Q12230	341 aa	Known RBP	13.32	□□□□□ -0.28
PCM1	YEL058W	NPL4	P33755	580 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	IRC8	P47046	822 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	TOS4	Q06266	489 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	FIG2	P25653	1609 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	PTK1	P36002	662 aa	Predicted RBP	13.31	□□□□□ -0.28
PCM1	YEL058W	MET1	P36150	593 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	EAF7	P53911	425 aa	Known RBP	13.31	□□□□□ -0.28
PCM1	YEL058W	VPS20	Q04272	221 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	PSF3	Q12146	194 aa		13.31	□□□□□ -0.28
PCM1	YEL058W	PGA3	Q12746	312 aa	Known RBP	13.31	□□□□□ -0.28
PCM1	YEL058W	ICL1	P28240	557 aa	Predicted RBP	13.3	□□□□□ -0.28
PCM1	YEL058W	IOC3	P43596	787 aa		13.3	□□□□□ -0.28
PCM1	YEL058W	JJJ2	P46997	583 aa		13.3	□□□□□ -0.28
PCM1	YEL058W	NPA3	P47122	385 aa		13.3	□□□□□ -0.28
PCM1	YEL058W	YKU70	P32807	602 aa		13.29	□□□□□ -0.28
PCM1	YEL058W	GEF1	P37020	779 aa		13.29	□□□□□ -0.28
PCM1	YEL058W	BOI1	P38041	980 aa	Known RBP	13.28	□□□□□ -0.28
PCM1	YEL058W	YER156C	P40093	338 aa	Known RBP	13.28	□□□□□ -0.28
PCM1	YEL058W	DJP1	P40564	432 aa		13.28	□□□□□ -0.28
PCM1	YEL058W	WRS1	Q12109	432 aa	Known RBP	13.28	□□□□□ -0.28
PCM1	YEL058W	FAS2	P19097	1887 aa	Known RBP	13.28	□□□□□ -0.28
PCM1	YEL058W	PPM2	Q08282	695 aa		13.28	□□□□□ -0.28
PCM1	YEL058W	SSF2	Q12153	453 aa	Predicted RBP	13.28	□□□□□ -0.28
PCM1	YEL058W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.27	□□□□□ -0.29	not detected
PCM1	YEL058W	GSM1	P42950	618 aa		13.27	□□□□□ -0.29
PCM1	YEL058W	GAS5	Q08193	484 aa		13.27	□□□□□ -0.29
PCM1	YEL058W	COQ1	P18900	473 aa		13.26	□□□□□ -0.29
PCM1	YEL058W	IMP2'	P32351	346 aa		13.26	□□□□□ -0.29
PCM1	YEL058W	PRP42	Q03776	544 aa	Known RBP	13.26	□□□□□ -0.29
PCM1	YEL058W	PEP3	P27801	918 aa		13.25	□□□□□ -0.29
PCM1	YEL058W	MDL2	P33311	773 aa		13.25	□□□□□ -0.29
PCM1	YEL058W	SNF3	P10870	884 aa		13.24	□□□□□ -0.29
PCM1	YEL058W	VID28	P40547	921 aa		13.24	□□□□□ -0.29
PCM1	YEL058W	DPL1	Q05567	589 aa		13.24	□□□□□ -0.29
PCM1	YEL058W	TSR3	Q12094	313 aa	Known RBP	13.24	□□□□□ -0.29
PCM1	YEL058W	ARG82	P07250	355 aa		13.24	□□□□□ -0.29
PCM1	YEL058W	TIF4632	P39936	914 aa	Known RBP	13.24	□□□□□ -0.29
PCM1	YEL058W	RPL19A	P0CX82	189 aa	Known RBP	13.23	□□□□□ -0.29
PCM1	YEL058W	RPL19B	P0CX83	189 aa	Predicted RBP	13.23	□□□□□ -0.29
PCM1	YEL058W	CRG1	P38892	291 aa	RIP-Chip data	13.23	□□□□□ -0.29	not detected
PCM1	YEL058W	RRP8	P38961	392 aa	Known RBP	13.23	□□□□□ -0.29
PCM1	YEL058W	ARP5	P53946	755 aa		13.23	□□□□□ -0.29
PCM1	YEL058W	ESF1	Q06344	628 aa	Known RBP	13.23	□□□□□ -0.29
PCM1	YEL058W	SPN1	Q06505	410 aa	Predicted RBP	13.23	□□□□□ -0.29
PCM1	YEL058W	TOP1	P04786	769 aa		13.21	□□□□□ -0.29
PCM1	YEL058W	CHO2	P05374	869 aa	Known RBP	13.21	□□□□□ -0.29
PCM1	YEL058W	BIK1	P11709	440 aa		13.21	□□□□□ -0.3
PCM1	YEL058W	SLN1	P39928	1220 aa	Predicted RBP	13.21	□□□□□ -0.3
PCM1	YEL058W	ECM23	Q02710	187 aa		13.21	□□□□□ -0.3
PCM1	YEL058W	DIP2	Q12220	943 aa	Predicted RBP	13.21	□□□□□ -0.3
PCM1	YEL058W	HKR1	P41809	1802 aa		13.2	□□□□□ -0.3
PCM1	YEL058W	MSP1	P28737	362 aa		13.2	□□□□□ -0.3
PCM1	YEL058W	RER2	P35196	286 aa		13.2	□□□□□ -0.3
PCM1	YEL058W	SHC1	P39000	512 aa		13.2	□□□□□ -0.3
PCM1	YEL058W	SNF7	P39929	240 aa	Known RBP	13.2	□□□□□ -0.3
PCM1	YEL058W	CTF18	P49956	741 aa		13.2	□□□□□ -0.3
PCM1	YEL058W	PIP2	P52960	996 aa		13.2	□□□□□ -0.3
PCM1	YEL058W	RRG1	Q12167	365 aa	Predicted RBP	13.2	□□□□□ -0.3
PCM1	YEL058W	ROX1	P25042	368 aa		13.19	□□□□□ -0.3
PCM1	YEL058W	FBP26	P32604	452 aa		13.19	□□□□□ -0.3
PCM1	YEL058W	APL6	P46682	809 aa		13.19	□□□□□ -0.3
PCM1	YEL058W	RPS15	Q01855	142 aa	Known RBP	13.19	□□□□□ -0.3
PCM1	YEL058W	HRQ1	Q05549	1077 aa		13.19	□□□□□ -0.3
PCM1	YEL058W	RPS7A	P26786	190 aa	Known RBP	13.18	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms