RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG20	YDL113C	PIB2	P53191	635 aa		6.18	□□□□□ -1.42
ATG20	YDL113C	SNU71	P53207	620 aa	Known RBP	6.18	□□□□□ -1.42
ATG20	YDL113C	SSK22	P25390	1331 aa	Predicted RBP	6.18	□□□□□ -1.42
ATG20	YDL113C	SSF1	P38789	453 aa	Predicted RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	LYS4	P49367	693 aa	Predicted RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	YGL242C	P53066	181 aa		6.17	□□□□□ -1.42
ATG20	YDL113C	MRPS35	P53292	345 aa		6.17	□□□□□ -1.42
ATG20	YDL113C	MDG1	P53885	366 aa		6.17	□□□□□ -1.42
ATG20	YDL113C	FPR4	Q06205	392 aa	Predicted RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	NOB1	Q08444	459 aa	Known RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	KTR1	P27810	393 aa	Known RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	SLD2	P34252	453 aa		6.17	□□□□□ -1.42
ATG20	YDL113C	UBP14	P38237	781 aa	Known RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	KRI1	P42846	591 aa	Known RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	YGL081W	P53156	320 aa		6.17	□□□□□ -1.42
ATG20	YDL113C	SEN54	Q02825	467 aa	Predicted RBP	6.17	□□□□□ -1.42
ATG20	YDL113C	UBP16	Q02863	499 aa		6.17	□□□□□ -1.42
ATG20	YDL113C	SRS2	P12954	1174 aa		6.16	□□□□□ -1.42
ATG20	YDL113C	RIM20	Q12033	661 aa		6.16	□□□□□ -1.42
ATG20	YDL113C	SNU66	Q12420	587 aa	Predicted RBP	6.16	□□□□□ -1.42
ATG20	YDL113C	RIM15	P43565	1770 aa		6.16	□□□□□ -1.42
ATG20	YDL113C	SEC18	P18759	758 aa	Known RBP	6.15	□□□□□ -1.42
ATG20	YDL113C	MLC1	P53141	149 aa		6.15	□□□□□ -1.42
ATG20	YDL113C	YMR074C	Q04773	145 aa		6.15	□□□□□ -1.42
ATG20	YDL113C	RPN7	Q06103	429 aa	Known RBP	6.15	□□□□□ -1.42
ATG20	YDL113C	PTC3	P34221	468 aa	Known RBP	6.15	□□□□□ -1.43
ATG20	YDL113C	VPS24	P36095	224 aa	Known RBP	6.15	□□□□□ -1.43
ATG20	YDL113C	TTI1	P36097	1038 aa		6.15	□□□□□ -1.43
ATG20	YDL113C	AAP1	P37898	856 aa	Known RBP	6.15	□□□□□ -1.43
ATG20	YDL113C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.15	□□□□□ -1.43	not detected
ATG20	YDL113C	YNL193W	P53870	558 aa		6.15	□□□□□ -1.43
ATG20	YDL113C	BRE1	Q07457	700 aa	Known RBP	6.15	□□□□□ -1.43
ATG20	YDL113C	GYP5	Q12344	894 aa		6.15	□□□□□ -1.43
ATG20	YDL113C	SUP35	P05453	685 aa	Known RBP	6.14	□□□□□ -1.43
ATG20	YDL113C	TRL1	P09880	827 aa	Known RBP	6.14	□□□□□ -1.43
ATG20	YDL113C	CLC1	P17891	233 aa		6.14	□□□□□ -1.43
ATG20	YDL113C	RRN6	P32786	894 aa		6.14	□□□□□ -1.43
ATG20	YDL113C	CWH41	P53008	833 aa		6.14	□□□□□ -1.43
ATG20	YDL113C	MTC5	Q03897	1148 aa		6.14	□□□□□ -1.43
ATG20	YDL113C	BUD31	P25337	157 aa	Predicted RBP	6.13	□□□□□ -1.43
ATG20	YDL113C	PBY1	P38254	753 aa		6.13	□□□□□ -1.43
ATG20	YDL113C	VHR2	P40041	505 aa		6.13	□□□□□ -1.43
ATG20	YDL113C	NPA3	P47122	385 aa		6.13	□□□□□ -1.43
ATG20	YDL113C	VPS20	Q04272	221 aa		6.13	□□□□□ -1.43
ATG20	YDL113C	CDC3	P32457	520 aa	Known RBP	6.13	□□□□□ -1.43
ATG20	YDL113C	SNF7	P39929	240 aa	Known RBP	6.13	□□□□□ -1.43
ATG20	YDL113C	RIX7	Q07844	837 aa	Known RBP	6.13	□□□□□ -1.43
ATG20	YDL113C	BUG1	Q12191	341 aa		6.13	□□□□□ -1.43
ATG20	YDL113C	HAT1	Q12341	374 aa		6.13	□□□□□ -1.43
ATG20	YDL113C	CAF20	P12962	161 aa	Known RBP	6.12	□□□□□ -1.43
ATG20	YDL113C	ROX1	P25042	368 aa		6.12	□□□□□ -1.43
ATG20	YDL113C	BIO2	P32451	375 aa		6.12	□□□□□ -1.43
ATG20	YDL113C	NGR1	P32831	672 aa	Known RBP	6.12	□□□□□ -1.43
ATG20	YDL113C	STM1	P39015	273 aa	Known RBP	6.12	□□□□□ -1.43
ATG20	YDL113C	PGA3	Q12746	312 aa	Known RBP	6.12	□□□□□ -1.43
ATG20	YDL113C	UBP1	P25037	809 aa		6.11	□□□□□ -1.43
ATG20	YDL113C	PSE1	P32337	1089 aa	Known RBP	6.11	□□□□□ -1.43
ATG20	YDL113C	YMR147W	P40218	223 aa	Known RBP	6.11	□□□□□ -1.43
ATG20	YDL113C	RPL34A	P87262	121 aa	Predicted RBP	6.11	□□□□□ -1.43
ATG20	YDL113C	RRI2	Q12348	645 aa		6.11	□□□□□ -1.43
ATG20	YDL113C	RNR2	P09938	399 aa	Known RBP	6.11	□□□□□ -1.43
ATG20	YDL113C	MSP1	P28737	362 aa		6.11	□□□□□ -1.43
ATG20	YDL113C	RPL34B	P40525	121 aa	Known RBP	6.11	□□□□□ -1.43
ATG20	YDL113C	ENT3	P47160	408 aa		6.11	□□□□□ -1.43
ATG20	YDL113C	SCY1	P53009	804 aa		6.11	□□□□□ -1.43
ATG20	YDL113C	YLR326W	Q06170	240 aa	Known RBP	6.11	□□□□□ -1.43
ATG20	YDL113C	DBP1	P24784	617 aa	Known RBP	6.1	□□□□□ -1.43
ATG20	YDL113C	HEM3	P28789	327 aa		6.1	□□□□□ -1.43
ATG20	YDL113C	THI3	Q07471	609 aa		6.1	□□□□□ -1.43
ATG20	YDL113C	CIC1	P38779	376 aa	Known RBP	6.09	□□□□□ -1.43
ATG20	YDL113C	CTH1	P47976	325 aa		6.09	□□□□□ -1.43
ATG20	YDL113C	RAT1	Q02792	1006 aa	Known RBP	6.09	□□□□□ -1.43
ATG20	YDL113C	TYW1	Q08960	810 aa	Known RBP	6.09	□□□□□ -1.43
ATG20	YDL113C	LSP1	Q12230	341 aa	Known RBP	6.09	□□□□□ -1.43
ATG20	YDL113C	RTG2	P32608	588 aa	Known RBP	6.09	□□□□□ -1.44
ATG20	YDL113C	AIM9	P40053	627 aa	Known RBP	6.09	□□□□□ -1.44
ATG20	YDL113C	VID28	P40547	921 aa		6.09	□□□□□ -1.44
ATG20	YDL113C	YML083C	Q04526	418 aa		6.09	□□□□□ -1.44
ATG20	YDL113C	SAC3	P46674	1301 aa		6.09	□□□□□ -1.44
ATG20	YDL113C	MGM1	P32266	881 aa		6.08	□□□□□ -1.44
ATG20	YDL113C	ARL1	P38116	183 aa	Known RBP	6.08	□□□□□ -1.44
ATG20	YDL113C	HAL5	P38970	855 aa	Known RBP	6.08	□□□□□ -1.44
ATG20	YDL113C	SLN1	P39928	1220 aa	Predicted RBP	6.08	□□□□□ -1.44
ATG20	YDL113C	YIR042C	P40586	236 aa		6.08	□□□□□ -1.44
ATG20	YDL113C	SRC1	Q03707	834 aa		6.08	□□□□□ -1.44
ATG20	YDL113C	BIK1	P11709	440 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	FRD1	P32614	470 aa	Known RBP	6.07	□□□□□ -1.44
ATG20	YDL113C	YBL036C	P38197	257 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	BDF2	Q07442	638 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	ADR1	P07248	1323 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	PUP1	P25043	261 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	IMP2'	P32351	346 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	UTP22	P53254	1237 aa	Predicted RBP	6.07	□□□□□ -1.44
ATG20	YDL113C	ARP5	P53946	755 aa		6.07	□□□□□ -1.44
ATG20	YDL113C	DUR1,2	P32528	1835 aa	Known RBP	6.06	□□□□□ -1.44
ATG20	YDL113C	UTP10	P42945	1769 aa	Known RBP	6.06	□□□□□ -1.44
ATG20	YDL113C	RPT3	P33298	428 aa	Known RBP	6.06	□□□□□ -1.44
ATG20	YDL113C	CTF18	P49956	741 aa		6.06	□□□□□ -1.44
ATG20	YDL113C	HRQ1	Q05549	1077 aa		6.06	□□□□□ -1.44
ATG20	YDL113C	LAM4	P38800	1345 aa		6.05	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms