RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W UBP2Q01476 1272 aa6.95□□□□□ -1.3
PTC1YDL006W TCB1Q12466 1186 aa6.95□□□□□ -1.3
PTC1YDL006W XRN1P22147 1528 aaKnown RBP6.95□□□□□ -1.3
PTC1YDL006W SMC1P32908 1225 aa6.94□□□□□ -1.3
PTC1YDL006W KTR2P33550 425 aa6.94□□□□□ -1.3
PTC1YDL006W GLY1P37303 387 aaKnown RBP6.94□□□□□ -1.3
PTC1YDL006W RGA1P39083 1007 aa6.94□□□□□ -1.3
PTC1YDL006W HXT8P40886 569 aa6.94□□□□□ -1.3
PTC1YDL006W LEU1P07264 779 aaKnown RBP6.93□□□□□ -1.3
PTC1YDL006W PDC6P26263 563 aaKnown RBP6.93□□□□□ -1.3
PTC1YDL006W KAP122P32767 1081 aa6.93□□□□□ -1.3
PTC1YDL006W QDR2P40474 542 aa6.93□□□□□ -1.3
PTC1YDL006W PSH1Q12161 406 aa6.93□□□□□ -1.3
PTC1YDL006W WHI5Q12416 295 aa6.93□□□□□ -1.3
PTC1YDL006W SUT1P53032 299 aaKnown RBP6.92□□□□□ -1.3
PTC1YDL006W RPC31P17890 251 aa6.91□□□□□ -1.3
PTC1YDL006W YBR287WP38355 427 aa6.91□□□□□ -1.3
PTC1YDL006W SNU71P53207 620 aaKnown RBP6.91□□□□□ -1.3
PTC1YDL006W OPT2Q06593 877 aa6.91□□□□□ -1.3
PTC1YDL006W CDC19P00549 500 aaKnown RBP6.9□□□□□ -1.3
PTC1YDL006W RPP1AP05318 106 aaPredicted RBP6.9□□□□□ -1.3
PTC1YDL006W ALD2P47771 506 aa6.9□□□□□ -1.3
PTC1YDL006W RRP15Q06511 250 aaPredicted RBP6.9□□□□□ -1.3
PTC1YDL006W FIR1P40020 876 aa6.89□□□□□ -1.31
PTC1YDL006W THI12P42883 340 aa6.89□□□□□ -1.31
PTC1YDL006W THI5P43534 340 aa6.89□□□□□ -1.31
PTC1YDL006W THI11P47183 340 aa6.89□□□□□ -1.31
PTC1YDL006W SKP1P52286 194 aa6.89□□□□□ -1.31
PTC1YDL006W MTO1P53070 669 aa6.89□□□□□ -1.31
PTC1YDL006W THI13Q07748 340 aa6.89□□□□□ -1.31
PTC1YDL006W YOR296WQ08748 1289 aa6.89□□□□□ -1.31
PTC1YDL006W MNL2Q12205 849 aa6.89□□□□□ -1.31
PTC1YDL006W MET4P32389 672 aa6.88□□□□□ -1.31
PTC1YDL006W ISW1P38144 1129 aa6.88□□□□□ -1.31
PTC1YDL006W NTA1P40354 457 aa6.88□□□□□ -1.31
PTC1YDL006W POL32P47110 350 aa6.88□□□□□ -1.31
PTC1YDL006W SCW11P53189 542 aa6.88□□□□□ -1.31
PTC1YDL006W CDC55Q00362 526 aa6.88□□□□□ -1.31
PTC1YDL006W RGP1P16664 663 aa6.87□□□□□ -1.31
PTC1YDL006W MSN1P22148 382 aa6.87□□□□□ -1.31
PTC1YDL006W GIP1P38229 639 aa6.87□□□□□ -1.31
PTC1YDL006W OSH7P38755 437 aa6.87□□□□□ -1.31
PTC1YDL006W YNL011CP53980 444 aa6.87□□□□□ -1.31
PTC1YDL006W RSC4Q02206 625 aa6.87□□□□□ -1.31
PTC1YDL006W TY1A-BLQ12266 440 aa6.87□□□□□ -1.31
PTC1YDL006W GCD6P32501 712 aaKnown RBP6.86□□□□□ -1.31
PTC1YDL006W RAD55P38953 406 aa6.86□□□□□ -1.31
PTC1YDL006W GPI13Q07830 1017 aa6.86□□□□□ -1.31
PTC1YDL006W ECM5Q03214 1411 aa6.85□□□□□ -1.31
PTC1YDL006W IRS4P36115 615 aaKnown RBP6.85□□□□□ -1.31
PTC1YDL006W MGE1P38523 228 aa6.85□□□□□ -1.31
PTC1YDL006W RGD2P43556 714 aa6.85□□□□□ -1.31
PTC1YDL006W CUS1Q02554 436 aaPredicted RBP6.85□□□□□ -1.31
PTC1YDL006W LCB5Q06147 687 aaKnown RBP6.85□□□□□ -1.31
PTC1YDL006W BUD4P47136 1447 aa6.84□□□□□ -1.31
PTC1YDL006W PHO4P07270 312 aaKnown RBP6.84□□□□□ -1.31
PTC1YDL006W SAM37P50110 327 aa6.84□□□□□ -1.31
PTC1YDL006W ATE1P16639 503 aa6.83□□□□□ -1.32
PTC1YDL006W BSD2P38356 321 aa6.83□□□□□ -1.32
PTC1YDL006W PSY2P40164 858 aa6.83□□□□□ -1.32
PTC1YDL006W YDR444WQ04093 687 aa6.83□□□□□ -1.32
PTC1YDL006W TIF6Q12522 245 aaKnown RBP6.83□□□□□ -1.32
PTC1YDL006W THO2P53552 1597 aaKnown RBP6.82□□□□□ -1.32
PTC1YDL006W REV3P14284 1504 aa6.82□□□□□ -1.32
PTC1YDL006W MET22P32179 357 aa6.82□□□□□ -1.32
PTC1YDL006W VPS35P34110 944 aa6.82□□□□□ -1.32
PTC1YDL006W CIC1P38779 376 aaKnown RBP6.82□□□□□ -1.32
PTC1YDL006W YJR107WP47145 328 aa6.82□□□□□ -1.32
PTC1YDL006W BSC2Q05611 235 aa6.82□□□□□ -1.32
PTC1YDL006W MRPL16P38064 232 aa6.81□□□□□ -1.32
PTC1YDL006W APM2P38700 605 aa6.81□□□□□ -1.32
PTC1YDL006W NOP7P53261 605 aaKnown RBP6.81□□□□□ -1.32
PTC1YDL006W STB3Q12427 513 aa6.81□□□□□ -1.32
PTC1YDL006W NCL1P38205 684 aaKnown RBP6.8□□□□□ -1.32
PTC1YDL006W ROG3P43602 733 aa6.8□□□□□ -1.32
PTC1YDL006W NAM8Q00539 523 aaKnown RBP6.8□□□□□ -1.32
PTC1YDL006W DIT1P21623 536 aa6.79□□□□□ -1.32
PTC1YDL006W AIM46P38885 310 aa6.79□□□□□ -1.32
PTC1YDL006W YER156CP40093 338 aaKnown RBP6.79□□□□□ -1.32
PTC1YDL006W ITC1P53125 1264 aa6.79□□□□□ -1.32
PTC1YDL006W TY1A-MR1Q04215 440 aa6.79□□□□□ -1.32
PTC1YDL006W SVF1Q05515 481 aa6.79□□□□□ -1.32
PTC1YDL006W NOC3Q07896 663 aaPredicted RBP6.79□□□□□ -1.32
PTC1YDL006W TAF2P23255 1407 aa6.78□□□□□ -1.32
PTC1YDL006W NAB2P32505 525 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
PTC1YDL006W PAM1P37304 830 aaKnown RBP6.78□□□□□ -1.32
PTC1YDL006W YIL165CP40446 119 aa6.78□□□□□ -1.32
PTC1YDL006W HEH2Q03281 663 aa6.78□□□□□ -1.32
PTC1YDL006W EMG1Q06287 252 aaKnown RBP6.78□□□□□ -1.32
PTC1YDL006W ACO2P39533 789 aa6.77□□□□□ -1.33
PTC1YDL006W DAK2P43550 591 aa6.77□□□□□ -1.33
PTC1YDL006W YDR461C-AQ2V2P7 80 aa6.77□□□□□ -1.33
PTC1YDL006W RPT1P33299 467 aaKnown RBP6.76□□□□□ -1.33
PTC1YDL006W CUZ1P53899 274 aa6.76□□□□□ -1.33
PTC1YDL006W YMR265CQ03508 461 aaKnown RBP6.76□□□□□ -1.33
PTC1YDL006W RSC2Q06488 889 aa6.76□□□□□ -1.33
PTC1YDL006W OXR1Q08952 273 aa6.76□□□□□ -1.33
PTC1YDL006W SEC8P32855 1065 aa6.75□□□□□ -1.33
PTC1YDL006W YNR040WP53736 256 aa6.75□□□□□ -1.33
PTC1YDL006W SIN3P22579 1536 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms