RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W DRS1P32892 752 aaKnown RBP14.05□□□□□ -0.16
PTC1YDL006W MTC1P47018 478 aaKnown RBP13.91□□□□□ -0.18
PTC1YDL006W BFR2Q06631 534 aaKnown RBP12.23□□□□□ -0.45
PTC1YDL006W DIP2Q12220 943 aaPredicted RBP11.93□□□□□ -0.5
PTC1YDL006W AVT3P36062 692 aa11.84□□□□□ -0.51
PTC1YDL006W TFA1P36100 482 aa11.65□□□□□ -0.54
PTC1YDL006W FAP1P53971 965 aa11.43□□□□□ -0.58
PTC1YDL006W ISW2Q08773 1120 aa11.3□□□□□ -0.6
PTC1YDL006W RSE1Q04693 1361 aaKnown RBP11.25□□□□□ -0.61
PTC1YDL006W PRI1P10363 409 aa11.08□□□□□ -0.64
PTC1YDL006W RPG1P38249 964 aaKnown RBP11.08□□□□□ -0.64
PTC1YDL006W AAD16Q02895 342 aa10.87□□□□□ -0.67
PTC1YDL006W RPL17AP05740 184 aaKnown RBP10.78□□□□□ -0.68
PTC1YDL006W RPL17BP46990 184 aaKnown RBP10.78□□□□□ -0.68
PTC1YDL006W PRY3P47033 881 aa10.74□□□□□ -0.69
PTC1YDL006W REB1P21538 810 aa10.65□□□□□ -0.7
PTC1YDL006W TSR3Q12094 313 aaKnown RBP10.48□□□□□ -0.73
PTC1YDL006W SPT21P35209 758 aa10.44□□□□□ -0.74
PTC1YDL006W RIM101P33400 625 aa10.33□□□□□ -0.76
PTC1YDL006W YCK3P39962 524 aa10.16□□□□□ -0.78
PTC1YDL006W MRPL32P25348 183 aa10.12□□□□□ -0.79
PTC1YDL006W RQC2Q12532 1038 aaKnown RBP10.09□□□□□ -0.79
PTC1YDL006W HAA1Q12753 694 aaKnown RBP10.08□□□□□ -0.8
PTC1YDL006W YKR023WP36119 530 aaKnown RBP10.03□□□□□ -0.8
PTC1YDL006W PTP3P40048 928 aa9.97□□□□□ -0.81
PTC1YDL006W OXP1P28273 1286 aa9.96□□□□□ -0.82
PTC1YDL006W SSP1P38871 571 aa9.92□□□□□ -0.82
PTC1YDL006W YIL055CP40523 627 aaKnown RBP9.85□□□□□ -0.83
PTC1YDL006W TFC8Q12308 588 aa9.85□□□□□ -0.83
PTC1YDL006W YAH1Q12184 172 aaKnown RBP9.8□□□□□ -0.84
PTC1YDL006W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.79□□□□□ -0.84not detected
PTC1YDL006W HOP09932 586 aa9.78□□□□□ -0.84
PTC1YDL006W CDC27P38042 758 aa9.77□□□□□ -0.85
PTC1YDL006W YLR271WQ06152 274 aa9.72□□□□□ -0.85
PTC1YDL006W RSM7P47150 247 aa9.7□□□□□ -0.86
PTC1YDL006W DCD1P06773 312 aa9.68□□□□□ -0.86
PTC1YDL006W MGA2P40578 1113 aa9.58□□□□□ -0.88
PTC1YDL006W DMA1P38823 416 aa9.57□□□□□ -0.88
PTC1YDL006W BCH2P36122 765 aa9.54□□□□□ -0.88
PTC1YDL006W AI2P03876 854 aa9.52□□□□□ -0.89
PTC1YDL006W BBC1P47068 1157 aa9.49□□□□□ -0.89
PTC1YDL006W PSD2P53037 1138 aaKnown RBP9.49□□□□□ -0.89
PTC1YDL006W UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.9
PTC1YDL006W YGL015CP33199 130 aa9.42□□□□□ -0.9
PTC1YDL006W CST9Q06032 482 aa9.42□□□□□ -0.9
PTC1YDL006W EPS1P40557 701 aa9.41□□□□□ -0.9
PTC1YDL006W SCY1P53009 804 aa9.36□□□□□ -0.91
PTC1YDL006W MAP2P38174 421 aaKnown RBP9.35□□□□□ -0.91
PTC1YDL006W BDF1P35817 686 aa9.33□□□□□ -0.92
PTC1YDL006W SLX5P32828 619 aaKnown RBP9.23□□□□□ -0.93
PTC1YDL006W MRM1P25270 412 aa9.21□□□□□ -0.94
PTC1YDL006W RTG3P38165 486 aa9.15□□□□□ -0.94
PTC1YDL006W RAM2P29703 316 aa9.12□□□□□ -0.95
PTC1YDL006W SAS10Q12136 610 aaPredicted RBP9.12□□□□□ -0.95
PTC1YDL006W RCR1P38212 213 aa9.06□□□□□ -0.96
PTC1YDL006W TIF4632P39936 914 aaKnown RBP9.05□□□□□ -0.96
PTC1YDL006W MAK11P20484 414 aaKnown RBP9.03□□□□□ -0.96
PTC1YDL006W VPS29P38759 282 aa9.01□□□□□ -0.97
PTC1YDL006W NSR1P27476 414 aaKnown RBP RIP-Chip data8.99□□□□□ -0.97not detected
PTC1YDL006W TGL3P40308 642 aa8.98□□□□□ -0.97
PTC1YDL006W SET1P38827 1080 aaKnown RBP8.97□□□□□ -0.97
PTC1YDL006W YMR1P47147 688 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
PTC1YDL006W IFH1P39520 1085 aa8.95□□□□□ -0.98
PTC1YDL006W YPR148CQ06523 435 aa8.92□□□□□ -0.98
PTC1YDL006W NOP53Q12080 455 aaKnown RBP8.9□□□□□ -0.98
PTC1YDL006W LEU3P08638 886 aa8.89□□□□□ -0.99
PTC1YDL006W YAP5P40574 245 aa8.88□□□□□ -0.99
PTC1YDL006W YOR238WQ08634 303 aa8.88□□□□□ -0.99
PTC1YDL006W COQ8P27697 501 aa8.87□□□□□ -0.99
PTC1YDL006W STS1P38637 319 aa8.87□□□□□ -0.99
PTC1YDL006W DBP1P24784 617 aaKnown RBP8.86□□□□□ -0.99
PTC1YDL006W CKB1P43639 278 aa8.85□□□□□ -0.99
PTC1YDL006W LEO1P38439 464 aa8.83□□□□□ -1
PTC1YDL006W YFR006WP43590 535 aa8.8□□□□□ -1
PTC1YDL006W VPS70P47161 811 aa8.79□□□□□ -1
PTC1YDL006W MIF2P35201 549 aa8.78□□□□□ -1
PTC1YDL006W EDS1P38073 919 aa8.76□□□□□ -1.01
PTC1YDL006W MST1P07236 462 aa8.75□□□□□ -1.01
PTC1YDL006W VMA1P17255 1071 aaKnown RBP8.72□□□□□ -1.01
PTC1YDL006W PTC3P34221 468 aaKnown RBP8.71□□□□□ -1.02
PTC1YDL006W PIB1Q06651 286 aa8.69□□□□□ -1.02
PTC1YDL006W SPB4P25808 606 aaPredicted RBP8.67□□□□□ -1.02
PTC1YDL006W SAM3Q08986 587 aa8.66□□□□□ -1.02
PTC1YDL006W DSF2P38213 736 aa8.64□□□□□ -1.03
PTC1YDL006W PBS2P08018 668 aa8.63□□□□□ -1.03
PTC1YDL006W GTT3P39996 337 aa8.63□□□□□ -1.03
PTC1YDL006W REF2P42073 533 aaPredicted RBP8.63□□□□□ -1.03
PTC1YDL006W RPN1P38764 993 aaKnown RBP8.62□□□□□ -1.03
PTC1YDL006W GRE2Q12068 342 aaKnown RBP8.61□□□□□ -1.03
PTC1YDL006W GUT1P32190 709 aa8.6□□□□□ -1.03
PTC1YDL006W ATH1P48016 1211 aa8.6□□□□□ -1.03
PTC1YDL006W MAK21Q12176 1025 aaKnown RBP8.59□□□□□ -1.03
PTC1YDL006W ABP1P15891 592 aaKnown RBP8.58□□□□□ -1.04
PTC1YDL006W GYP5Q12344 894 aa8.55□□□□□ -1.04
PTC1YDL006W MAM3Q12296 706 aa8.53□□□□□ -1.04
PTC1YDL006W MSB4Q12317 492 aa8.53□□□□□ -1.04
PTC1YDL006W BUD31P25337 157 aaPredicted RBP8.52□□□□□ -1.05
PTC1YDL006W YOL036WQ08206 761 aa8.52□□□□□ -1.05
PTC1YDL006W TAF7Q05021 590 aa8.51□□□□□ -1.05
PTC1YDL006W COX6P00427 148 aa8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms