RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SWI3P32591 825 aa6.66□□□□□ -1.34
PDB1YBR221C TIF4632P39936 914 aaKnown RBP6.66□□□□□ -1.34
PDB1YBR221C EMP47P43555 445 aa6.66□□□□□ -1.34
PDB1YBR221C BDP1P46678 594 aa6.66□□□□□ -1.34
PDB1YBR221C VPS16Q03308 798 aa6.66□□□□□ -1.34
PDB1YBR221C PIN2Q12057 282 aa6.66□□□□□ -1.34
PDB1YBR221C PUS1Q12211 544 aaKnown RBP6.66□□□□□ -1.34
PDB1YBR221C ENO2P00925 437 aaKnown RBP6.65□□□□□ -1.34
PDB1YBR221C CLN2P20438 545 aa6.65□□□□□ -1.34
PDB1YBR221C YDJ1P25491 409 aaKnown RBP6.65□□□□□ -1.34
PDB1YBR221C RAD27P26793 382 aa6.65□□□□□ -1.34
PDB1YBR221C PAF1P38351 445 aa6.65□□□□□ -1.34
PDB1YBR221C YGR021WP53212 290 aa6.65□□□□□ -1.34
PDB1YBR221C ECM23Q02710 187 aa6.65□□□□□ -1.34
PDB1YBR221C SPO20Q04359 397 aa6.65□□□□□ -1.34
PDB1YBR221C CAB1Q04430 367 aa6.65□□□□□ -1.34
PDB1YBR221C BDF2Q07442 638 aa6.65□□□□□ -1.34
PDB1YBR221C HOP09932 586 aa6.64□□□□□ -1.35
PDB1YBR221C SPT5P27692 1063 aaKnown RBP6.64□□□□□ -1.35
PDB1YBR221C PRP45P28004 379 aaPredicted RBP6.64□□□□□ -1.35
PDB1YBR221C TEA1P47988 759 aa6.64□□□□□ -1.35
PDB1YBR221C FOL1P53848 824 aa6.64□□□□□ -1.35
PDB1YBR221C TFC8Q12308 588 aa6.64□□□□□ -1.35
PDB1YBR221C DCD1P06773 312 aa6.63□□□□□ -1.35
PDB1YBR221C CRP1P38845 465 aaKnown RBP6.63□□□□□ -1.35
PDB1YBR221C RPN11P43588 306 aaKnown RBP6.63□□□□□ -1.35
PDB1YBR221C PEX8P53248 589 aa6.63□□□□□ -1.35
PDB1YBR221C RAD59Q12223 238 aa6.63□□□□□ -1.35
PDB1YBR221C TY3B-IQ7LHG5 1498 aaKnown RBP6.62□□□□□ -1.35
PDB1YBR221C NUP82P40368 713 aa6.62□□□□□ -1.35
PDB1YBR221C RIM21P48565 533 aa6.62□□□□□ -1.35
PDB1YBR221C YLR326WQ06170 240 aaKnown RBP6.62□□□□□ -1.35
PDB1YBR221C ESF1Q06344 628 aaKnown RBP6.62□□□□□ -1.35
PDB1YBR221C YOR378WQ08902 515 aa6.62□□□□□ -1.35
PDB1YBR221C SRM1P21827 482 aa6.61□□□□□ -1.35
PDB1YBR221C MTC2P34246 357 aa6.61□□□□□ -1.35
PDB1YBR221C JNM1P36224 373 aa6.61□□□□□ -1.35
PDB1YBR221C SNF7P39929 240 aaKnown RBP6.61□□□□□ -1.35
PDB1YBR221C FYV10P40492 516 aa6.61□□□□□ -1.35
PDB1YBR221C YDR090CQ03193 310 aa6.61□□□□□ -1.35
PDB1YBR221C PKH1Q03407 766 aa6.61□□□□□ -1.35
PDB1YBR221C CWC15Q03772 175 aaKnown RBP6.61□□□□□ -1.35
PDB1YBR221C SLX4Q12098 748 aa6.61□□□□□ -1.35
PDB1YBR221C RAD9P14737 1309 aa6.6□□□□□ -1.35
PDB1YBR221C RAD4P14736 754 aa6.6□□□□□ -1.35
PDB1YBR221C HSC82P15108 705 aaKnown RBP6.6□□□□□ -1.35
PDB1YBR221C VMA1P17255 1071 aaKnown RBP6.6□□□□□ -1.35
PDB1YBR221C PEP12P32854 288 aa6.6□□□□□ -1.35
PDB1YBR221C UBX7P38349 436 aa6.6□□□□□ -1.35
PDB1YBR221C RRD1P40454 393 aaKnown RBP6.6□□□□□ -1.35
PDB1YBR221C HOS2P53096 452 aaPredicted RBP6.6□□□□□ -1.35
PDB1YBR221C RMD1Q03441 430 aa6.6□□□□□ -1.35
PDB1YBR221C MET4P32389 672 aa6.59□□□□□ -1.35
PDB1YBR221C EDS1P38073 919 aa6.59□□□□□ -1.35
PDB1YBR221C TAF5P38129 798 aa6.59□□□□□ -1.35
PDB1YBR221C TPS3P38426 1054 aaKnown RBP6.59□□□□□ -1.35
PDB1YBR221C VID27P40157 782 aa6.59□□□□□ -1.35
PDB1YBR221C DOT5P40553 215 aa6.59□□□□□ -1.35
PDB1YBR221C GDE1Q02979 1223 aa6.59□□□□□ -1.35
PDB1YBR221C PKH3Q03306 898 aaPredicted RBP6.59□□□□□ -1.35
PDB1YBR221C NUT2Q06213 157 aa6.59□□□□□ -1.35
PDB1YBR221C VPS5Q92331 675 aa6.59□□□□□ -1.35
PDB1YBR221C EDE1P34216 1381 aa6.58□□□□□ -1.36
PDB1YBR221C FOB1O13329 566 aa6.58□□□□□ -1.36
PDB1YBR221C SPT2P06843 333 aaPredicted RBP6.58□□□□□ -1.36
PDB1YBR221C PRP5P21372 849 aaPredicted RBP6.58□□□□□ -1.36
PDB1YBR221C KIC1P38692 1080 aa6.58□□□□□ -1.36
PDB1YBR221C HSE1P38753 452 aa6.58□□□□□ -1.36
PDB1YBR221C DAS1P47005 663 aa6.58□□□□□ -1.36
PDB1YBR221C LYS4P49367 693 aaPredicted RBP6.58□□□□□ -1.36
PDB1YBR221C SXM1Q04175 944 aaKnown RBP6.58□□□□□ -1.36
PDB1YBR221C PLP2Q12017 286 aa6.58□□□□□ -1.36
PDB1YBR221C TMA7Q3E764 64 aaKnown RBP6.58□□□□□ -1.36
PDB1YBR221C TY1B-AO13527 1196 aaKnown RBP6.57□□□□□ -1.36
PDB1YBR221C INH1P01097 85 aa6.57□□□□□ -1.36
PDB1YBR221C ATP4P05626 244 aa6.57□□□□□ -1.36
PDB1YBR221C PHO8P11491 566 aa6.57□□□□□ -1.36
PDB1YBR221C BOI1P38041 980 aaKnown RBP6.57□□□□□ -1.36
PDB1YBR221C YAP1801P38856 637 aa6.57□□□□□ -1.36
PDB1YBR221C NPR2P39923 615 aa6.57□□□□□ -1.36
PDB1YBR221C VHR2P40041 505 aa6.57□□□□□ -1.36
PDB1YBR221C NYV1Q12255 253 aa6.57□□□□□ -1.36
PDB1YBR221C RRI2Q12348 645 aa6.57□□□□□ -1.36
PDB1YBR221C GCN2P15442 1659 aa6.57□□□□□ -1.36
PDB1YBR221C RAV1P47104 1357 aa6.57□□□□□ -1.36
PDB1YBR221C GAL2P13181 574 aa6.56□□□□□ -1.36
PDB1YBR221C KTR7P40504 517 aa6.56□□□□□ -1.36
PDB1YBR221C YPP1P46951 817 aa6.56□□□□□ -1.36
PDB1YBR221C ACF4P47129 309 aa6.56□□□□□ -1.36
PDB1YBR221C HUL5P53119 910 aa6.56□□□□□ -1.36
PDB1YBR221C YLR125WQ12138 136 aa6.56□□□□□ -1.36
PDB1YBR221C RTP1Q12751 981 aa6.56□□□□□ -1.36
PDB1YBR221C QCR6P00127 147 aa6.55□□□□□ -1.36
PDB1YBR221C HAP4P14064 554 aa6.55□□□□□ -1.36
PDB1YBR221C CDC11P32458 415 aa6.55□□□□□ -1.36
PDB1YBR221C IES5P40060 125 aa6.55□□□□□ -1.36
PDB1YBR221C YJL181WP46987 611 aa6.55□□□□□ -1.36
PDB1YBR221C HST2P53686 357 aa6.55□□□□□ -1.36
PDB1YBR221C PUF6Q04373 656 aaKnown RBP6.55□□□□□ -1.36
PDB1YBR221C GRC3Q07845 632 aa6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms