RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W FET4P40988 552 aa2.83□□□□□ -1.96
NUP170YBL079W YGR117CP53270 476 aa2.83□□□□□ -1.96
NUP170YBL079W SKY1Q03656 742 aa2.83□□□□□ -1.96
NUP170YBL079W YML020WQ03722 664 aa2.83□□□□□ -1.96
NUP170YBL079W SUB2Q07478 446 aaKnown RBP2.83□□□□□ -1.96
NUP170YBL079W NCB2Q92317 146 aa2.83□□□□□ -1.96
NUP170YBL079W OCT1P35999 772 aa2.83□□□□□ -1.96
NUP170YBL079W OSH3P38713 996 aaKnown RBP2.83□□□□□ -1.96
NUP170YBL079W FBP1P09201 348 aa2.82□□□□□ -1.96
NUP170YBL079W SPT5P27692 1063 aaKnown RBP2.82□□□□□ -1.96
NUP170YBL079W PCS60P38137 543 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
NUP170YBL079W ERG7P38604 731 aa2.82□□□□□ -1.96
NUP170YBL079W HUL5P53119 910 aa2.82□□□□□ -1.96
NUP170YBL079W UBP16Q02863 499 aa2.82□□□□□ -1.96
NUP170YBL079W TY1B-AO13527 1196 aaKnown RBP2.82□□□□□ -1.96
NUP170YBL079W SNA3P14359 133 aa2.82□□□□□ -1.96
NUP170YBL079W RTR1P40084 226 aaPredicted RBP2.82□□□□□ -1.96
NUP170YBL079W YJR008WP47085 338 aa2.82□□□□□ -1.96
NUP170YBL079W YOL057WQ08225 711 aa2.82□□□□□ -1.96
NUP170YBL079W SMY1P32364 656 aaKnown RBP2.82□□□□□ -1.96
NUP170YBL079W AIM21P40563 679 aa2.82□□□□□ -1.96
NUP170YBL079W ATG1P53104 897 aa2.82□□□□□ -1.96
NUP170YBL079W KIN4Q01919 800 aa2.82□□□□□ -1.96
NUP170YBL079W TRM44Q02648 567 aaKnown RBP2.82□□□□□ -1.96
NUP170YBL079W PRP42Q03776 544 aaKnown RBP2.82□□□□□ -1.96
NUP170YBL079W PCL8Q08966 492 aa2.82□□□□□ -1.96
NUP170YBL079W CYB2P00175 591 aa2.81□□□□□ -1.96
NUP170YBL079W CDC60P26637 1090 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W SMY2P32909 740 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W NIT1P40447 199 aa2.81□□□□□ -1.96
NUP170YBL079W PUS6P53294 404 aa2.81□□□□□ -1.96
NUP170YBL079W ICL1P28240 557 aaPredicted RBP2.81□□□□□ -1.96
NUP170YBL079W NMD2P38798 1089 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W APL6P46682 809 aa2.81□□□□□ -1.96
NUP170YBL079W SDH5Q08230 162 aa2.81□□□□□ -1.96
NUP170YBL079W CDC19P00549 500 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W POL3P15436 1097 aa2.81□□□□□ -1.96
NUP170YBL079W PTK2P47116 818 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W SOL4P53315 255 aa2.81□□□□□ -1.96
NUP170YBL079W YNR014WP53719 212 aa2.81□□□□□ -1.96
NUP170YBL079W MOT2P34909 587 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W TOM71P38825 639 aaKnown RBP2.81□□□□□ -1.96
NUP170YBL079W UBP12P39538 1254 aa2.81□□□□□ -1.96
NUP170YBL079W IDI1P15496 288 aa2.8□□□□□ -1.96
NUP170YBL079W PIP2P52960 996 aa2.8□□□□□ -1.96
NUP170YBL079W UTP10P42945 1769 aaKnown RBP2.8□□□□□ -1.96
NUP170YBL079W MMF1P40185 145 aaKnown RBP2.8□□□□□ -1.96
NUP170YBL079W SGD1Q06132 899 aa2.8□□□□□ -1.96
NUP170YBL079W BRE1Q07457 700 aaKnown RBP2.8□□□□□ -1.96
NUP170YBL079W PKC1P24583 1151 aa2.8□□□□□ -1.96
NUP170YBL079W GPB2P39717 880 aa2.8□□□□□ -1.96
NUP170YBL079W HEF3P53978 1044 aaKnown RBP2.8□□□□□ -1.96
NUP170YBL079W ECM30Q06673 1274 aa2.8□□□□□ -1.96
NUP170YBL079W GAS5Q08193 484 aa2.8□□□□□ -1.96
NUP170YBL079W RTG3P38165 486 aa2.8□□□□□ -1.96
NUP170YBL079W YPP1P46951 817 aa2.8□□□□□ -1.96
NUP170YBL079W ALE1Q08548 619 aa2.8□□□□□ -1.96
NUP170YBL079W CBP1P07252 654 aa2.79□□□□□ -1.96
NUP170YBL079W MRP7P12687 371 aa2.79□□□□□ -1.96
NUP170YBL079W FRD1P32614 470 aaKnown RBP2.79□□□□□ -1.96
NUP170YBL079W RGT1P32862 1170 aa2.79□□□□□ -1.96
NUP170YBL079W PSF2P40359 213 aa2.79□□□□□ -1.96
NUP170YBL079W CLA4P48562 842 aa2.79□□□□□ -1.96
NUP170YBL079W CTI6Q08923 506 aa2.79□□□□□ -1.96
NUP170YBL079W FIG2P25653 1609 aa2.79□□□□□ -1.96
NUP170YBL079W PSH1Q12161 406 aa2.79□□□□□ -1.96
NUP170YBL079W SYN8P31377 255 aa2.79□□□□□ -1.96
NUP170YBL079W GUA1P38625 525 aaKnown RBP2.79□□□□□ -1.96
NUP170YBL079W SET1P38827 1080 aaKnown RBP2.79□□□□□ -1.96
NUP170YBL079W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
NUP170YBL079W SPT2P06843 333 aaPredicted RBP2.78□□□□□ -1.96
NUP170YBL079W ESF1Q06344 628 aaKnown RBP2.78□□□□□ -1.96
NUP170YBL079W TFC8Q12308 588 aa2.78□□□□□ -1.96
NUP170YBL079W LAM4P38800 1345 aa2.78□□□□□ -1.96
NUP170YBL079W CST26P38226 397 aa2.78□□□□□ -1.96
NUP170YBL079W KRE2P27809 442 aa2.78□□□□□ -1.96
NUP170YBL079W FIR1P40020 876 aa2.78□□□□□ -1.96
NUP170YBL079W ICP55P40051 511 aa2.78□□□□□ -1.96
NUP170YBL079W VPS64Q03944 604 aa2.78□□□□□ -1.96
NUP170YBL079W CFT2Q12102 859 aaPredicted RBP2.78□□□□□ -1.96
NUP170YBL079W ARG82P07250 355 aa2.78□□□□□ -1.97
NUP170YBL079W HPR1P17629 752 aaKnown RBP2.78□□□□□ -1.97
NUP170YBL079W CSE1P33307 960 aa2.78□□□□□ -1.97
NUP170YBL079W OYE3P41816 400 aaPredicted RBP2.78□□□□□ -1.97
NUP170YBL079W IOC3P43596 787 aa2.78□□□□□ -1.97
NUP170YBL079W RSC8P43609 557 aaKnown RBP2.78□□□□□ -1.97
NUP170YBL079W ALG2P43636 503 aa2.78□□□□□ -1.97
NUP170YBL079W YJR107WP47145 328 aa2.78□□□□□ -1.97
NUP170YBL079W YGL082WP53155 381 aa2.78□□□□□ -1.97
NUP170YBL079W RRI2Q12348 645 aa2.78□□□□□ -1.97
NUP170YBL079W CLB5P30283 435 aa2.77□□□□□ -1.97
NUP170YBL079W KRI1P42846 591 aaKnown RBP2.77□□□□□ -1.97
NUP170YBL079W YFH7P43591 353 aa2.77□□□□□ -1.97
NUP170YBL079W CDC45Q08032 650 aa2.77□□□□□ -1.97
NUP170YBL079W CIT3P43635 486 aa2.77□□□□□ -1.97
NUP170YBL079W TUS1Q06412 1307 aa2.77□□□□□ -1.97
NUP170YBL079W PMA1P05030 918 aaKnown RBP2.77□□□□□ -1.97
NUP170YBL079W TPM2P40414 161 aa2.77□□□□□ -1.97
NUP170YBL079W VPS62P53285 467 aa2.77□□□□□ -1.97
NUP170YBL079W YPL034WQ03083 165 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms