RNA–Protein interactions for RNA: snR13

snR13, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR13, Length 124 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR13	snR13	VPS28	Q02767	242 aa		0.27	□□□□□ -2.37
snR13	snR13	YDC1	Q02896	317 aa		0.27	□□□□□ -2.37
snR13	snR13	KEI1	Q06346	221 aa		0.27	□□□□□ -2.37
snR13	snR13	NOC4	Q06512	552 aa	Predicted RBP	0.27	□□□□□ -2.37
snR13	snR13	BUD4	P47136	1447 aa		0.27	□□□□□ -2.37
snR13	snR13	YCF1	P39109	1515 aa	Known RBP	0.27	□□□□□ -2.37
snR13	snR13	PDR15	Q04182	1529 aa	Known RBP	0.27	□□□□□ -2.37
snR13	snR13	PEP1	P32319	1579 aa		0.27	□□□□□ -2.37
snR13	snR13	THO2	P53552	1597 aa	Known RBP	0.27	□□□□□ -2.37
snR13	snR13	TRA1	P38811	3744 aa		0.26	□□□□□ -2.37
snR13	snR13	CUP1-1	P0CX80	61 aa		0.26	□□□□□ -2.37
snR13	snR13	CUP1-2	P0CX81	61 aa		0.26	□□□□□ -2.37
snR13	snR13	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.26	□□□□□ -2.37	not detected
snR13	snR13	YCR001W	P25347	104 aa		0.26	□□□□□ -2.37
snR13	snR13	CAF4	P36130	643 aa		0.26	□□□□□ -2.37
snR13	snR13	RIM9	Q04734	239 aa		0.26	□□□□□ -2.37
snR13	snR13	FCY1	Q12178	158 aa		0.26	□□□□□ -2.37
snR13	snR13	MPD1	Q12404	318 aa	Known RBP	0.26	□□□□□ -2.37
snR13	snR13	YOR381W-A	Q3E804	55 aa		0.26	□□□□□ -2.37
snR13	snR13	TCB3	Q03640	1545 aa	Known RBP	0.26	□□□□□ -2.37
snR13	snR13	USO1	P25386	1790 aa		0.25	□□□□□ -2.37
snR13	snR13	SSK2	P53599	1579 aa		0.25	□□□□□ -2.37
snR13	snR13	CHD1	P32657	1468 aa		0.25	□□□□□ -2.37
snR13	snR13	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.25	□□□□□ -2.37	not detected
snR13	snR13	MOB1	P40484	314 aa		0.25	□□□□□ -2.37
snR13	snR13	YGL230C	P53074	147 aa		0.25	□□□□□ -2.37
snR13	snR13	AVO2	Q04749	426 aa		0.25	□□□□□ -2.37
snR13	snR13	SHH4	Q06236	168 aa		0.25	□□□□□ -2.37
snR13	snR13	YHR213W-B	Q8TGK1	99 aa		0.25	□□□□□ -2.37
snR13	snR13	HFA1	P32874	2273 aa		0.25	□□□□□ -2.37
snR13	snR13	SEC16	P48415	2195 aa	Known RBP	0.25	□□□□□ -2.37
snR13	snR13	PDR10	P51533	1564 aa		0.24	□□□□□ -2.37
snR13	snR13	RKR1	Q04781	1562 aa		0.24	□□□□□ -2.37
snR13	snR13	SPT6	P23615	1451 aa	Known RBP	0.24	□□□□□ -2.37
snR13	snR13	YPK9	Q12697	1472 aa		0.24	□□□□□ -2.37
snR13	snR13	RAD9	P14737	1309 aa		0.24	□□□□□ -2.37
snR13	snR13	CLG1	P35190	452 aa		0.24	□□□□□ -2.37
snR13	snR13	FYV4	P38783	130 aa	Predicted RBP	0.24	□□□□□ -2.37
snR13	snR13	POG1	P40473	351 aa		0.24	□□□□□ -2.37
snR13	snR13	YKR005C	Q02203	525 aa		0.24	□□□□□ -2.37
snR13	snR13	YRF1-1	P0CX20	1796 aa		0.24	□□□□□ -2.37
snR13	snR13	YRF1-5	P0CX21	1796 aa		0.24	□□□□□ -2.37
snR13	snR13	YRF1-8	P0CX22	1796 aa		0.24	□□□□□ -2.37
snR13	snR13	DOP1	Q03921	1698 aa		0.24	□□□□□ -2.37
snR13	snR13	VPS15	P22219	1454 aa		0.23	□□□□□ -2.37
snR13	snR13	UFD4	P33202	1483 aa		0.23	□□□□□ -2.37
snR13	snR13	YOR1	P53049	1477 aa		0.23	□□□□□ -2.37
snR13	snR13	SCC2	Q04002	1493 aa		0.23	□□□□□ -2.37
snR13	snR13	SKI3	P17883	1432 aa	Known RBP	0.23	□□□□□ -2.37
snR13	snR13	SSN2	P38931	1420 aa		0.23	□□□□□ -2.37
snR13	snR13	TRM732	Q03496	1420 aa		0.23	□□□□□ -2.37
snR13	snR13	YAP3	P38749	330 aa		0.23	□□□□□ -2.37
snR13	snR13	FMP32	P43557	207 aa		0.23	□□□□□ -2.37
snR13	snR13	CGR1	P53188	120 aa		0.23	□□□□□ -2.37
snR13	snR13	URA2	P07259	2214 aa	Known RBP	0.23	□□□□□ -2.37
snR13	snR13	DNF3	Q12674	1656 aa		0.23	□□□□□ -2.37
snR13	snR13	ARO1	P08566	1588 aa	Known RBP	0.23	□□□□□ -2.37
snR13	snR13	ATG2	P53855	1592 aa		0.23	□□□□□ -2.37
snR13	snR13	NUP170	P38181	1502 aa		0.23	□□□□□ -2.37
snR13	snR13	TY3B-G	Q99315	1547 aa		0.23	□□□□□ -2.37
snR13	snR13	SPP41	P38904	1435 aa		0.22	□□□□□ -2.37
snR13	snR13	SNT2	P53127	1403 aa		0.22	□□□□□ -2.37
snR13	snR13	YSP2	Q06681	1438 aa		0.22	□□□□□ -2.37
snR13	snR13	SMC4	Q12267	1418 aa		0.22	□□□□□ -2.37
snR13	snR13	DUR1,2	P32528	1835 aa	Known RBP	0.22	□□□□□ -2.37
snR13	snR13	POL2	P21951	2222 aa	Known RBP	0.22	□□□□□ -2.37
snR13	snR13	TY1B-BR	Q12193	1756 aa		0.22	□□□□□ -2.37
snR13	snR13	TY1B-GR3	Q12316	1755 aa		0.22	□□□□□ -2.37
snR13	snR13	TY1B-OR	Q92393	1755 aa		0.22	□□□□□ -2.37
snR13	snR13	GCN2	P15442	1659 aa		0.22	□□□□□ -2.37
snR13	snR13	CHC1	P22137	1653 aa	Known RBP	0.22	□□□□□ -2.37
snR13	snR13	KIN28	P06242	306 aa		0.22	□□□□□ -2.37
snR13	snR13	AHC2	P25649	128 aa		0.22	□□□□□ -2.37
snR13	snR13	CPR5	P35176	225 aa		0.22	□□□□□ -2.37
snR13	snR13	HHY1	P39982	102 aa		0.22	□□□□□ -2.37
snR13	snR13	RFC2	P40348	353 aa		0.22	□□□□□ -2.37
snR13	snR13	YML079W	Q03629	201 aa		0.22	□□□□□ -2.37
snR13	snR13	GRX8	Q05926	109 aa		0.22	□□□□□ -2.37
snR13	snR13	BRX1	Q08235	291 aa	Known RBP	0.22	□□□□□ -2.37
snR13	snR13	YOR214C	Q12282	236 aa		0.22	□□□□□ -2.37
snR13	snR13	YDR034W-B	Q6Q5X2	51 aa		0.22	□□□□□ -2.37
snR13	snR13	BUD3	P25558	1636 aa		0.22	□□□□□ -2.37
snR13	snR13	ULS1	Q08562	1619 aa		0.22	□□□□□ -2.37
snR13	snR13	HAP1	P0CE41	1502 aa		0.22	□□□□□ -2.37
snR13	snR13	XRN1	P22147	1528 aa	Known RBP	0.22	□□□□□ -2.37
snR13	snR13	GDB1	Q06625	1536 aa		0.22	□□□□□ -2.37
snR13	snR13	POL1	P13382	1468 aa		0.22	□□□□□ -2.37
snR13	snR13	NUP159	P40477	1460 aa		0.22	□□□□□ -2.37
snR13	snR13	BCK1	Q01389	1478 aa		0.22	□□□□□ -2.37
snR13	snR13	TOP2	P06786	1428 aa	Known RBP	0.21	□□□□□ -2.38
snR13	snR13	SRB8	P25648	1427 aa		0.21	□□□□□ -2.38
snR13	snR13	CAT8	P39113	1433 aa		0.21	□□□□□ -2.38
snR13	snR13	PDR11	P40550	1411 aa		0.21	□□□□□ -2.38
snR13	snR13	RPO21	P04050	1733 aa	Known RBP	0.21	□□□□□ -2.38
snR13	snR13	YBT1	P32386	1661 aa		0.21	□□□□□ -2.38
snR13	snR13	SPO14	P36126	1683 aa		0.21	□□□□□ -2.38
snR13	snR13	YRF1-2	P40105	1681 aa		0.21	□□□□□ -2.38
snR13	snR13	ESP1	Q03018	1630 aa		0.21	□□□□□ -2.38
snR13	snR13	FAS2	P19097	1887 aa	Known RBP	0.21	□□□□□ -2.38
snR13	snR13	IML1	P47170	1584 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms