Protein–RNA interactions for Protein: Q04734

RIM9, pH-response regulator protein palI/RIM9, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM9Q04734 NSR1YGR159C 1245 nt17.07■□□□□ 0.32
RIM9Q04734 YML009W-BYML009W-B 477 nt16.93■□□□□ 0.3
RIM9Q04734 NOP1YDL014W 984 nt16.49■□□□□ 0.23
RIM9Q04734 YKL036CYKL036C 393 nt15.39■□□□□ 0.05
RIM9Q04734 MDJ1YFL016C 1536 nt15.31■□□□□ 0.04
RIM9Q04734 Q0297Q0297 156 nt14.5□□□□□ -0.09
RIM9Q04734 YJL027CYJL027C 417 nt14.4□□□□□ -0.1
RIM9Q04734 SRX1YKL086W 384 nt14.4□□□□□ -0.1
RIM9Q04734 SCS3YGL126W 1143 nt14.09□□□□□ -0.15
RIM9Q04734 YCR051WYCR051W 669 nt13.63□□□□□ -0.23
RIM9Q04734 DBP2YNL112W 1641 nt13.47□□□□□ -0.25
RIM9Q04734 YOL085CYOL085C 342 nt13.32□□□□□ -0.28
RIM9Q04734 YBR190WYBR190W 312 nt13.16□□□□□ -0.3
RIM9Q04734 TRN1tP(UGG)A 72 nt13.08□□□□□ -0.32
RIM9Q04734 SUF9tP(UGG)F 72 nt13.08□□□□□ -0.32
RIM9Q04734 SUF8tP(UGG)H 72 nt13.08□□□□□ -0.32
RIM9Q04734 tP(UGG)LtP(UGG)L 72 nt13.08□□□□□ -0.32
RIM9Q04734 SUF7tP(UGG)M 72 nt13.08□□□□□ -0.32
RIM9Q04734 tP(UGG)N1tP(UGG)N1 72 nt13.08□□□□□ -0.32
RIM9Q04734 tP(UGG)N2tP(UGG)N2 72 nt13.08□□□□□ -0.32
RIM9Q04734 tP(UGG)O1tP(UGG)O1 72 nt13.08□□□□□ -0.32
RIM9Q04734 SUF11tP(UGG)O2 72 nt13.08□□□□□ -0.32
RIM9Q04734 PKP1YIL042C 1185 nt13.04□□□□□ -0.32
RIM9Q04734 RPP1BYDL130W 321 nt13□□□□□ -0.33
RIM9Q04734 CCC1YLR220W 969 nt12.91□□□□□ -0.34
RIM9Q04734 RTC3YHR087W 336 nt12.83□□□□□ -0.36
RIM9Q04734 SCJ1YMR214W 1134 nt12.83□□□□□ -0.36
RIM9Q04734 ATS1YAL020C 1002 nt12.68□□□□□ -0.38
RIM9Q04734 RVS167YDR388W 1449 nt12.65□□□□□ -0.38
RIM9Q04734 PET122YER153C 765 nt12.36□□□□□ -0.43
RIM9Q04734 SCR1SCR1 522 nt12.33□□□□□ -0.44
RIM9Q04734 SSA3YBL075C 1950 nt12.32□□□□□ -0.44
RIM9Q04734 tP(UGG)O3tP(UGG)O3 72 nt12.3□□□□□ -0.44
RIM9Q04734 SHR5YOL110W 714 nt12.15□□□□□ -0.46
RIM9Q04734 PUT4YOR348C 1884 nt12.1□□□□□ -0.47
RIM9Q04734 RRN5YLR141W 1092 nt12.04□□□□□ -0.48
RIM9Q04734 URN1YPR152C 1398 nt11.92□□□□□ -0.5
RIM9Q04734 YDJ1YNL064C 1230 nt11.92□□□□□ -0.5
RIM9Q04734 RSB1YOR049C 1065 nt11.84□□□□□ -0.51
RIM9Q04734 DEP1YAL013W 1218 nt11.83□□□□□ -0.52
RIM9Q04734 OPI9YLR338W 858 nt11.82□□□□□ -0.52
RIM9Q04734 ARE1YCR048W 1833 nt11.81□□□□□ -0.52
RIM9Q04734 YER088W-BYER088W-B 147 nt11.81□□□□□ -0.52
RIM9Q04734 SAH1YER043C 1350 nt11.78□□□□□ -0.52
RIM9Q04734 PST2YDR032C 597 nt11.73□□□□□ -0.53
RIM9Q04734 RPN10YHR200W 807 nt11.73□□□□□ -0.53
RIM9Q04734 POA1YBR022W 534 nt11.69□□□□□ -0.54
RIM9Q04734 YNL208WYNL208W 600 nt11.67□□□□□ -0.54
RIM9Q04734 YHR049C-AYHR049C-A 297 nt11.65□□□□□ -0.54
RIM9Q04734 GAR1YHR089C 618 nt11.65□□□□□ -0.54
RIM9Q04734 BSC6YOL137W 1494 nt11.49□□□□□ -0.57
RIM9Q04734 PUN1YLR414C 792 nt11.48□□□□□ -0.57
RIM9Q04734 YJR018WYJR018W 363 nt11.37□□□□□ -0.59
RIM9Q04734 YKL097CYKL097C 411 nt11.36□□□□□ -0.59
RIM9Q04734 PTC2YER089C 1395 nt11.36□□□□□ -0.59
RIM9Q04734 BUD23YCR047C 828 nt11.35□□□□□ -0.59
RIM9Q04734 TIR1YER011W 765 nt11.28□□□□□ -0.6
RIM9Q04734 NAB2YGL122C 1578 nt11.25□□□□□ -0.61
RIM9Q04734 SSA1YAL005C 1929 nt11.19□□□□□ -0.62
RIM9Q04734 SHU1YHL006C 453 nt11.16□□□□□ -0.62
RIM9Q04734 SPT5YML010W 3192 nt11.14□□□□□ -0.63
RIM9Q04734 YJR120WYJR120W 351 nt11.14□□□□□ -0.63
RIM9Q04734 RPP2BYDR382W 333 nt11.1□□□□□ -0.63
RIM9Q04734 DAL1YIR027C 1383 nt11.06□□□□□ -0.64
RIM9Q04734 FIS1YIL065C 468 nt11.06□□□□□ -0.64
RIM9Q04734 INM2YDR287W 879 nt11.02□□□□□ -0.65
RIM9Q04734 FPR4YLR449W 1179 nt11□□□□□ -0.65
RIM9Q04734 PHO4YFR034C 939 nt10.95□□□□□ -0.66
RIM9Q04734 SRB2YHR041C 633 nt10.93□□□□□ -0.66
RIM9Q04734 YAL037C-BYAL037C-B 975 nt10.89□□□□□ -0.67
RIM9Q04734 YBL100CYBL100C 315 nt10.85□□□□□ -0.67
RIM9Q04734 YOR139CYOR139C 393 nt10.85□□□□□ -0.67
RIM9Q04734 BDH2YAL061W 1254 nt10.83□□□□□ -0.68
RIM9Q04734 YPS1YLR120C 1710 nt10.82□□□□□ -0.68
RIM9Q04734 MEP2YNL142W 1500 nt10.82□□□□□ -0.68
RIM9Q04734 SSA4YER103W 1929 nt10.82□□□□□ -0.68
RIM9Q04734 WWM1YFL010C 636 nt10.74□□□□□ -0.69
RIM9Q04734 YGR021WYGR021W 873 nt10.73□□□□□ -0.69
RIM9Q04734 YDR095CYDR095C 411 nt10.72□□□□□ -0.69
RIM9Q04734 NPL3YDR432W 1245 nt10.72□□□□□ -0.69
RIM9Q04734 FUN26YAL022C 1554 nt10.72□□□□□ -0.69
RIM9Q04734 YHR165W-AYHR165W-A 312 nt10.7□□□□□ -0.7
RIM9Q04734 HOM6YJR139C 1080 nt10.68□□□□□ -0.7
RIM9Q04734 LSM3YLR438C-A 270 nt10.68□□□□□ -0.7
RIM9Q04734 TRM9YML014W 840 nt10.67□□□□□ -0.7
RIM9Q04734 DCW1YKL046C 1350 nt10.62□□□□□ -0.71
RIM9Q04734 MNP1YGL068W 585 nt10.61□□□□□ -0.71
RIM9Q04734 ALF1YNL148C 765 nt10.61□□□□□ -0.71
RIM9Q04734 YFL021C-AYFL021C-A 855 nt10.6□□□□□ -0.71
RIM9Q04734 YOL037CYOL037C 354 nt10.59□□□□□ -0.71
RIM9Q04734 CCT6YDR188W 1641 nt10.58□□□□□ -0.72
RIM9Q04734 RKM5YLR137W 1104 nt10.52□□□□□ -0.73
RIM9Q04734 RPP2AYOL039W 321 nt10.52□□□□□ -0.73
RIM9Q04734 SUF2tP(AGG)C 72 nt10.51□□□□□ -0.73
RIM9Q04734 SUF10tP(AGG)N 72 nt10.51□□□□□ -0.73
RIM9Q04734 EMI2YDR516C 1503 nt10.5□□□□□ -0.73
RIM9Q04734 PTP1YDL230W 1008 nt10.49□□□□□ -0.73
RIM9Q04734 YMR090WYMR090W 684 nt10.47□□□□□ -0.73
RIM9Q04734 SIS1YNL007C 1059 nt10.47□□□□□ -0.73
RIM9Q04734 tM(CAU)CtM(CAU)C 72 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms