Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 NSR1YGR159C 1245 nt16.96■□□□□ 0.31
VPS28Q02767 YML009W-BYML009W-B 477 nt16.66■□□□□ 0.26
VPS28Q02767 NOP1YDL014W 984 nt16.05■□□□□ 0.16
VPS28Q02767 MDJ1YFL016C 1536 nt15.43■□□□□ 0.06
VPS28Q02767 YKL036CYKL036C 393 nt14.4□□□□□ -0.1
VPS28Q02767 YJL027CYJL027C 417 nt14.22□□□□□ -0.13
VPS28Q02767 SRX1YKL086W 384 nt14.02□□□□□ -0.17
VPS28Q02767 Q0297Q0297 156 nt13.92□□□□□ -0.18
VPS28Q02767 DBP2YNL112W 1641 nt13.51□□□□□ -0.25
VPS28Q02767 YBR190WYBR190W 312 nt13.31□□□□□ -0.28
VPS28Q02767 YCR051WYCR051W 669 nt13.24□□□□□ -0.29
VPS28Q02767 SSA3YBL075C 1950 nt13□□□□□ -0.33
VPS28Q02767 TRN1tP(UGG)A 72 nt12.94□□□□□ -0.34
VPS28Q02767 SUF9tP(UGG)F 72 nt12.94□□□□□ -0.34
VPS28Q02767 SUF8tP(UGG)H 72 nt12.94□□□□□ -0.34
VPS28Q02767 tP(UGG)LtP(UGG)L 72 nt12.94□□□□□ -0.34
VPS28Q02767 SUF7tP(UGG)M 72 nt12.94□□□□□ -0.34
VPS28Q02767 tP(UGG)N1tP(UGG)N1 72 nt12.94□□□□□ -0.34
VPS28Q02767 tP(UGG)N2tP(UGG)N2 72 nt12.94□□□□□ -0.34
VPS28Q02767 tP(UGG)O1tP(UGG)O1 72 nt12.94□□□□□ -0.34
VPS28Q02767 SUF11tP(UGG)O2 72 nt12.94□□□□□ -0.34
VPS28Q02767 RTC3YHR087W 336 nt12.94□□□□□ -0.34
VPS28Q02767 SCS3YGL126W 1143 nt12.88□□□□□ -0.35
VPS28Q02767 CCC1YLR220W 969 nt12.76□□□□□ -0.37
VPS28Q02767 RVS167YDR388W 1449 nt12.59□□□□□ -0.39
VPS28Q02767 YOL085CYOL085C 342 nt12.49□□□□□ -0.41
VPS28Q02767 RPP1BYDL130W 321 nt12.48□□□□□ -0.41
VPS28Q02767 SCJ1YMR214W 1134 nt12.44□□□□□ -0.42
VPS28Q02767 PUT4YOR348C 1884 nt12.4□□□□□ -0.42
VPS28Q02767 PKP1YIL042C 1185 nt12.32□□□□□ -0.44
VPS28Q02767 tP(UGG)O3tP(UGG)O3 72 nt12.08□□□□□ -0.48
VPS28Q02767 SHR5YOL110W 714 nt12.06□□□□□ -0.48
VPS28Q02767 ARE1YCR048W 1833 nt12.04□□□□□ -0.48
VPS28Q02767 URN1YPR152C 1398 nt11.97□□□□□ -0.49
VPS28Q02767 PET122YER153C 765 nt11.96□□□□□ -0.49
VPS28Q02767 POA1YBR022W 534 nt11.95□□□□□ -0.5
VPS28Q02767 SAH1YER043C 1350 nt11.92□□□□□ -0.5
VPS28Q02767 OPI9YLR338W 858 nt11.92□□□□□ -0.5
VPS28Q02767 YHR049C-AYHR049C-A 297 nt11.88□□□□□ -0.51
VPS28Q02767 DEP1YAL013W 1218 nt11.82□□□□□ -0.52
VPS28Q02767 BSC6YOL137W 1494 nt11.79□□□□□ -0.52
VPS28Q02767 YDJ1YNL064C 1230 nt11.72□□□□□ -0.53
VPS28Q02767 RPN10YHR200W 807 nt11.71□□□□□ -0.53
VPS28Q02767 SCR1SCR1 522 nt11.71□□□□□ -0.53
VPS28Q02767 YNL208WYNL208W 600 nt11.62□□□□□ -0.55
VPS28Q02767 SPT5YML010W 3192 nt11.61□□□□□ -0.55
VPS28Q02767 RRN5YLR141W 1092 nt11.57□□□□□ -0.56
VPS28Q02767 PUN1YLR414C 792 nt11.56□□□□□ -0.56
VPS28Q02767 BUD23YCR047C 828 nt11.55□□□□□ -0.56
VPS28Q02767 GAR1YHR089C 618 nt11.49□□□□□ -0.57
VPS28Q02767 PTC2YER089C 1395 nt11.48□□□□□ -0.57
VPS28Q02767 ATS1YAL020C 1002 nt11.41□□□□□ -0.58
VPS28Q02767 YJR018WYJR018W 363 nt11.4□□□□□ -0.58
VPS28Q02767 NAB2YGL122C 1578 nt11.4□□□□□ -0.58
VPS28Q02767 SSA4YER103W 1929 nt11.37□□□□□ -0.59
VPS28Q02767 YER088W-BYER088W-B 147 nt11.35□□□□□ -0.59
VPS28Q02767 FIS1YIL065C 468 nt11.2□□□□□ -0.62
VPS28Q02767 RSB1YOR049C 1065 nt11.19□□□□□ -0.62
VPS28Q02767 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
VPS28Q02767 YJR120WYJR120W 351 nt11.16□□□□□ -0.62
VPS28Q02767 TIR1YER011W 765 nt11.14□□□□□ -0.63
VPS28Q02767 MEP2YNL142W 1500 nt11.13□□□□□ -0.63
VPS28Q02767 SSA1YAL005C 1929 nt11.09□□□□□ -0.63
VPS28Q02767 FPR4YLR449W 1179 nt11.09□□□□□ -0.63
VPS28Q02767 INM2YDR287W 879 nt11.06□□□□□ -0.64
VPS28Q02767 RPP2BYDR382W 333 nt11.05□□□□□ -0.64
VPS28Q02767 PHO4YFR034C 939 nt11.05□□□□□ -0.64
VPS28Q02767 YPS1YLR120C 1710 nt11.01□□□□□ -0.65
VPS28Q02767 BDF1YLR399C 2061 nt10.99□□□□□ -0.65
VPS28Q02767 PAC11YDR488C 1602 nt10.98□□□□□ -0.65
VPS28Q02767 DCW1YKL046C 1350 nt10.93□□□□□ -0.66
VPS28Q02767 YHR165W-AYHR165W-A 312 nt10.88□□□□□ -0.67
VPS28Q02767 YDR095CYDR095C 411 nt10.87□□□□□ -0.67
VPS28Q02767 YBL100CYBL100C 315 nt10.87□□□□□ -0.67
VPS28Q02767 TAT1YBR069C 1860 nt10.84□□□□□ -0.67
VPS28Q02767 NVJ2YPR091C 2313 nt10.84□□□□□ -0.67
VPS28Q02767 SRB2YHR041C 633 nt10.82□□□□□ -0.68
VPS28Q02767 EMI2YDR516C 1503 nt10.79□□□□□ -0.68
VPS28Q02767 BDH2YAL061W 1254 nt10.77□□□□□ -0.69
VPS28Q02767 YMR090WYMR090W 684 nt10.74□□□□□ -0.69
VPS28Q02767 FUN26YAL022C 1554 nt10.73□□□□□ -0.69
VPS28Q02767 YBR220CYBR220C 1683 nt10.73□□□□□ -0.69
VPS28Q02767 YDL221WYDL221W 552 nt10.68□□□□□ -0.7
VPS28Q02767 PTP1YDL230W 1008 nt10.68□□□□□ -0.7
VPS28Q02767 ALF1YNL148C 765 nt10.66□□□□□ -0.7
VPS28Q02767 RPP2AYOL039W 321 nt10.66□□□□□ -0.7
VPS28Q02767 CAC2YML102W 1407 nt10.66□□□□□ -0.7
VPS28Q02767 PST2YDR032C 597 nt10.65□□□□□ -0.7
VPS28Q02767 SDH1YKL148C 1923 nt10.63□□□□□ -0.71
VPS28Q02767 TRM9YML014W 840 nt10.63□□□□□ -0.71
VPS28Q02767 LSM3YLR438C-A 270 nt10.57□□□□□ -0.72
VPS28Q02767 CCT6YDR188W 1641 nt10.57□□□□□ -0.72
VPS28Q02767 WWM1YFL010C 636 nt10.56□□□□□ -0.72
VPS28Q02767 SIS1YNL007C 1059 nt10.54□□□□□ -0.72
VPS28Q02767 SUF2tP(AGG)C 72 nt10.5□□□□□ -0.73
VPS28Q02767 SUF10tP(AGG)N 72 nt10.5□□□□□ -0.73
VPS28Q02767 IRC15YPL017C 1500 nt10.49□□□□□ -0.73
VPS28Q02767 SCC4YER147C 1875 nt10.49□□□□□ -0.73
VPS28Q02767 FPS1YLL043W 2010 nt10.48□□□□□ -0.73
VPS28Q02767 GIS3YLR094C 1509 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms