RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C MRX12P47084 519 aa6.48□□□□□ -1.37
VPS21YOR089C SSF1P38789 453 aaPredicted RBP6.47□□□□□ -1.37
VPS21YOR089C ATG3P40344 310 aa6.47□□□□□ -1.37
VPS21YOR089C EMP47P43555 445 aa6.47□□□□□ -1.37
VPS21YOR089C SNU71P53207 620 aaKnown RBP6.47□□□□□ -1.37
VPS21YOR089C MCM16Q12262 181 aa6.47□□□□□ -1.37
VPS21YOR089C HEM3P28789 327 aa6.46□□□□□ -1.38
VPS21YOR089C DAL1P32375 460 aa6.45□□□□□ -1.38
VPS21YOR089C ISR1Q06098 443 aaKnown RBP6.45□□□□□ -1.38
VPS21YOR089C HAT1Q12341 374 aa6.45□□□□□ -1.38
VPS21YOR089C HAL5P38970 855 aaKnown RBP6.44□□□□□ -1.38
VPS21YOR089C JJJ3P47138 172 aa6.44□□□□□ -1.38
VPS21YOR089C YML083CQ04526 418 aa6.44□□□□□ -1.38
VPS21YOR089C WTM2Q12206 467 aa6.44□□□□□ -1.38
VPS21YOR089C DPH6Q12429 685 aa6.44□□□□□ -1.38
VPS21YOR089C PEP12P32854 288 aa6.43□□□□□ -1.38
VPS21YOR089C MTC5Q03897 1148 aa6.43□□□□□ -1.38
VPS21YOR089C ASF1P32447 279 aa6.42□□□□□ -1.38
VPS21YOR089C STM1P39015 273 aaKnown RBP6.42□□□□□ -1.38
VPS21YOR089C LYS5P50113 272 aa6.42□□□□□ -1.38
VPS21YOR089C ECM23Q02710 187 aa6.42□□□□□ -1.38
VPS21YOR089C SPT2P06843 333 aaPredicted RBP6.41□□□□□ -1.38
VPS21YOR089C GAL2P13181 574 aa6.41□□□□□ -1.38
VPS21YOR089C SLA1P32790 1244 aa6.41□□□□□ -1.38
VPS21YOR089C DLD3P39976 496 aaKnown RBP6.41□□□□□ -1.38
VPS21YOR089C CUZ1P53899 274 aa6.41□□□□□ -1.38
VPS21YOR089C TY1A-DR3Q12441 440 aa6.41□□□□□ -1.38
VPS21YOR089C SEC20P28791 383 aa6.4□□□□□ -1.38
VPS21YOR089C SSN3P39073 555 aa6.4□□□□□ -1.38
VPS21YOR089C KTR7P40504 517 aa6.39□□□□□ -1.39
VPS21YOR089C UTP13Q05946 817 aaKnown RBP6.39□□□□□ -1.39
VPS21YOR089C UTR2P32623 467 aa6.38□□□□□ -1.39
VPS21YOR089C MDJ1P35191 511 aa6.38□□□□□ -1.39
VPS21YOR089C UBX7P38349 436 aa6.38□□□□□ -1.39
VPS21YOR089C PUF6Q04373 656 aaKnown RBP6.38□□□□□ -1.39
VPS21YOR089C RPP2BP02400 110 aaKnown RBP6.37□□□□□ -1.39
VPS21YOR089C HAP4P14064 554 aa6.37□□□□□ -1.39
VPS21YOR089C RDS2P19541 446 aaKnown RBP6.37□□□□□ -1.39
VPS21YOR089C MSN5P52918 1224 aa6.37□□□□□ -1.39
VPS21YOR089C SEN54Q02825 467 aaPredicted RBP6.37□□□□□ -1.39
VPS21YOR089C DAT1P13483 248 aaKnown RBP6.36□□□□□ -1.39
VPS21YOR089C ICP55P40051 511 aa6.36□□□□□ -1.39
VPS21YOR089C UTP7P40055 554 aaKnown RBP6.36□□□□□ -1.39
VPS21YOR089C UBP15P50101 1230 aa6.36□□□□□ -1.39
VPS21YOR089C PHO87P25360 923 aa6.35□□□□□ -1.39
VPS21YOR089C SOH1P38633 127 aa6.35□□□□□ -1.39
VPS21YOR089C YFL066CP43538 392 aa6.34□□□□□ -1.39
VPS21YOR089C KAR5Q04746 504 aa6.34□□□□□ -1.39
VPS21YOR089C YBL113CQ7M4S9 792 aa6.34□□□□□ -1.39
VPS21YOR089C RRN6P32786 894 aa6.33□□□□□ -1.4
VPS21YOR089C CEM1P39525 442 aa6.33□□□□□ -1.4
VPS21YOR089C MET10P39692 1035 aa6.33□□□□□ -1.4
VPS21YOR089C HDA3Q06623 655 aa6.33□□□□□ -1.4
VPS21YOR089C DIT1P21623 536 aa6.32□□□□□ -1.4
VPS21YOR089C SYT1Q06836 1226 aa6.32□□□□□ -1.4
VPS21YOR089C SHM1P37292 490 aaPredicted RBP6.31□□□□□ -1.4
VPS21YOR089C TBS1P38114 1094 aa6.31□□□□□ -1.4
VPS21YOR089C YFL034WP43564 1073 aa6.31□□□□□ -1.4
VPS21YOR089C SUM1P46676 1062 aa6.31□□□□□ -1.4
VPS21YOR089C YMR265CQ03508 461 aaKnown RBP6.31□□□□□ -1.4
VPS21YOR089C GAS4Q08271 471 aa6.31□□□□□ -1.4
VPS21YOR089C PHM7Q12252 991 aa6.31□□□□□ -1.4
VPS21YOR089C CWC15Q03772 175 aaKnown RBP6.3□□□□□ -1.4
VPS21YOR089C MSC6Q08818 692 aaKnown RBP6.3□□□□□ -1.4
VPS21YOR089C PUS1Q12211 544 aaKnown RBP6.3□□□□□ -1.4
VPS21YOR089C TSC13Q99190 310 aa6.3□□□□□ -1.4
VPS21YOR089C ERP5P38819 212 aa6.29□□□□□ -1.4
VPS21YOR089C JJJ2P46997 583 aa6.29□□□□□ -1.4
VPS21YOR089C NSG2P53898 299 aa6.29□□□□□ -1.4
VPS21YOR089C FUR4P05316 633 aaKnown RBP6.28□□□□□ -1.4
VPS21YOR089C SRS2P12954 1174 aa6.28□□□□□ -1.4
VPS21YOR089C VAN1P23642 535 aa6.28□□□□□ -1.4
VPS21YOR089C AHP1P38013 176 aaKnown RBP6.28□□□□□ -1.4
VPS21YOR089C IPL1P38991 367 aa6.28□□□□□ -1.4
VPS21YOR089C LSB3P43603 459 aaKnown RBP6.28□□□□□ -1.4
VPS21YOR089C KRE33P53914 1056 aaKnown RBP6.28□□□□□ -1.4
VPS21YOR089C PNP1Q05788 311 aa6.28□□□□□ -1.4
VPS21YOR089C THI72Q08579 599 aa6.28□□□□□ -1.4
VPS21YOR089C YDR461C-AQ2V2P7 80 aa6.28□□□□□ -1.4
VPS21YOR089C TRS33Q99394 268 aa6.28□□□□□ -1.4
VPS21YOR089C AI1P03875 834 aa6.27□□□□□ -1.41
VPS21YOR089C ACS2P52910 683 aaKnown RBP6.27□□□□□ -1.41
VPS21YOR089C ATG1P53104 897 aa6.27□□□□□ -1.41
VPS21YOR089C ADE12P80210 433 aaKnown RBP6.27□□□□□ -1.41
VPS21YOR089C PAM1P37304 830 aaKnown RBP6.26□□□□□ -1.41
VPS21YOR089C YPQ2Q06328 317 aa6.26□□□□□ -1.41
VPS21YOR089C PUN1Q06991 263 aa6.26□□□□□ -1.41
VPS21YOR089C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
VPS21YOR089C IRE1P32361 1115 aa6.25□□□□□ -1.41
VPS21YOR089C GRS1P38088 690 aaKnown RBP6.25□□□□□ -1.41
VPS21YOR089C PPX1P38698 397 aa6.25□□□□□ -1.41
VPS21YOR089C ALA1P40825 983 aaKnown RBP6.25□□□□□ -1.41
VPS21YOR089C ROM1P53046 1155 aa6.25□□□□□ -1.41
VPS21YOR089C PSH1Q12161 406 aa6.25□□□□□ -1.41
VPS21YOR089C RPS31P05759 152 aaKnown RBP6.24□□□□□ -1.41
VPS21YOR089C SWI5P08153 709 aa6.24□□□□□ -1.41
VPS21YOR089C PDI1P17967 522 aaKnown RBP6.24□□□□□ -1.41
VPS21YOR089C YHL050CP38721 697 aa6.24□□□□□ -1.41
VPS21YOR089C YHR219WP38900 624 aa6.24□□□□□ -1.41
VPS21YOR089C SBE2P42223 864 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms