RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W TOM1Q03280 3268 aa7.33□□□□□ -1.24
SSP120YLR250W HKR1P41809 1802 aa7.32□□□□□ -1.24
SSP120YLR250W PSD2P53037 1138 aaKnown RBP7.32□□□□□ -1.24
SSP120YLR250W YNL050CP53952 270 aa7.32□□□□□ -1.24
SSP120YLR250W SAS4Q04003 481 aa7.32□□□□□ -1.24
SSP120YLR250W NSE3Q05541 303 aa7.32□□□□□ -1.24
SSP120YLR250W DPL1Q05567 589 aa7.32□□□□□ -1.24
SSP120YLR250W AIM7Q12156 149 aa7.31□□□□□ -1.24
SSP120YLR250W COQ4O13525 335 aa7.3□□□□□ -1.24
SSP120YLR250W MSM1P22438 575 aa7.3□□□□□ -1.24
SSP120YLR250W STV1P37296 890 aa7.3□□□□□ -1.24
SSP120YLR250W RTR1P40084 226 aaPredicted RBP7.3□□□□□ -1.24
SSP120YLR250W YIL089WP40500 205 aa7.3□□□□□ -1.24
SSP120YLR250W VPS4P52917 437 aa7.3□□□□□ -1.24
SSP120YLR250W TRM44Q02648 567 aaKnown RBP7.3□□□□□ -1.24
SSP120YLR250W FCP1Q03254 732 aa7.3□□□□□ -1.24
SSP120YLR250W SYF1Q04048 859 aaPredicted RBP7.3□□□□□ -1.24
SSP120YLR250W HAT1Q12341 374 aa7.3□□□□□ -1.24
SSP120YLR250W RPS9BP05755 195 aaKnown RBP7.29□□□□□ -1.24
SSP120YLR250W GAS5Q08193 484 aa7.29□□□□□ -1.24
SSP120YLR250W BMS1Q08965 1183 aaKnown RBP7.29□□□□□ -1.24
SSP120YLR250W PRD1P25375 712 aa7.28□□□□□ -1.24
SSP120YLR250W GLC3P32775 704 aa7.28□□□□□ -1.24
SSP120YLR250W TIM50Q02776 476 aa7.28□□□□□ -1.24
SSP120YLR250W SSK22P25390 1331 aaPredicted RBP7.27□□□□□ -1.24
SSP120YLR250W ZDS1P50111 915 aaKnown RBP7.27□□□□□ -1.25
SSP120YLR250W POM152P39685 1337 aa7.27□□□□□ -1.25
SSP120YLR250W LYS2P07702 1392 aa7.26□□□□□ -1.25
SSP120YLR250W AFG2P32794 780 aa7.26□□□□□ -1.25
SSP120YLR250W PKH1Q03407 766 aa7.26□□□□□ -1.25
SSP120YLR250W THI22Q06490 572 aa7.26□□□□□ -1.25
SSP120YLR250W HPR1P17629 752 aaKnown RBP7.25□□□□□ -1.25
SSP120YLR250W EMP47P43555 445 aa7.25□□□□□ -1.25
SSP120YLR250W YGR117CP53270 476 aa7.25□□□□□ -1.25
SSP120YLR250W RTT109Q07794 436 aa7.25□□□□□ -1.25
SSP120YLR250W TRP5P00931 707 aaKnown RBP7.24□□□□□ -1.25
SSP120YLR250W RPL17AP05740 184 aaKnown RBP7.24□□□□□ -1.25
SSP120YLR250W NSR1P27476 414 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25 RIP-Chip
SSP120YLR250W PNT1P38969 423 aa7.24□□□□□ -1.25
SSP120YLR250W PEA2P40091 420 aa7.24□□□□□ -1.25
SSP120YLR250W GSM1P42950 618 aa7.24□□□□□ -1.25
SSP120YLR250W RPL17BP46990 184 aaKnown RBP7.24□□□□□ -1.25
SSP120YLR250W YLR271WQ06152 274 aa7.24□□□□□ -1.25
SSP120YLR250W SWI1P09547 1314 aa7.24□□□□□ -1.25
SSP120YLR250W FLO11P08640 1367 aa7.23□□□□□ -1.25
SSP120YLR250W MPP10P47083 593 aaKnown RBP7.23□□□□□ -1.25
SSP120YLR250W RPT4P53549 437 aaKnown RBP7.23□□□□□ -1.25
SSP120YLR250W YOL057WQ08225 711 aa7.23□□□□□ -1.25
SSP120YLR250W SDH2P21801 266 aa7.22□□□□□ -1.25
SSP120YLR250W KRE2P27809 442 aa7.22□□□□□ -1.25
SSP120YLR250W SPL2P38839 148 aa7.22□□□□□ -1.25
SSP120YLR250W MAM1P40065 302 aa7.22□□□□□ -1.25
SSP120YLR250W CWC15Q03772 175 aaKnown RBP7.22□□□□□ -1.25
SSP120YLR250W ICP55P40051 511 aa7.21□□□□□ -1.26
SSP120YLR250W IOC4Q04213 475 aa7.21□□□□□ -1.26
SSP120YLR250W RRG1Q12167 365 aaPredicted RBP7.21□□□□□ -1.26
SSP120YLR250W GYP7P48365 746 aa7.2□□□□□ -1.26
SSP120YLR250W TOS4Q06266 489 aa7.2□□□□□ -1.26
SSP120YLR250W DPH6Q12429 685 aa7.2□□□□□ -1.26
SSP120YLR250W NGR1P32831 672 aaKnown RBP7.19□□□□□ -1.26
SSP120YLR250W NUP133P36161 1157 aa7.19□□□□□ -1.26
SSP120YLR250W TIF4632P39936 914 aaKnown RBP7.19□□□□□ -1.26
SSP120YLR250W YGR122WP53272 402 aa7.19□□□□□ -1.26
SSP120YLR250W CBP1P07252 654 aa7.18□□□□□ -1.26
SSP120YLR250W MGM1P32266 881 aa7.18□□□□□ -1.26
SSP120YLR250W CST6P40535 587 aa7.18□□□□□ -1.26
SSP120YLR250W HEF3P53978 1044 aaKnown RBP7.18□□□□□ -1.26
SSP120YLR250W SRT1Q03175 343 aa7.18□□□□□ -1.26
SSP120YLR250W YDR306CQ06640 478 aa7.18□□□□□ -1.26
SSP120YLR250W THI3Q07471 609 aa7.18□□□□□ -1.26
SSP120YLR250W TIF6Q12522 245 aaKnown RBP7.18□□□□□ -1.26
SSP120YLR250W CSR2Q12734 1121 aa7.18□□□□□ -1.26
SSP120YLR250W HVG1P0CE11 249 aa7.17□□□□□ -1.26
SSP120YLR250W TPD3P31383 635 aa7.17□□□□□ -1.26
SSP120YLR250W HXT10P43581 546 aa7.17□□□□□ -1.26
SSP120YLR250W ITC1P53125 1264 aa7.17□□□□□ -1.26
SSP120YLR250W DNM1P54861 757 aa7.17□□□□□ -1.26
SSP120YLR250W SEN54Q02825 467 aaPredicted RBP7.17□□□□□ -1.26
SSP120YLR250W TYW1Q08960 810 aaKnown RBP7.17□□□□□ -1.26
SSP120YLR250W HAA1Q12753 694 aaKnown RBP7.17□□□□□ -1.26
SSP120YLR250W MRP7P12687 371 aa7.16□□□□□ -1.26
SSP120YLR250W PAM1P37304 830 aaKnown RBP7.16□□□□□ -1.26
SSP120YLR250W CRF1Q04930 467 aa7.16□□□□□ -1.26
SSP120YLR250W PIB1Q06651 286 aa7.16□□□□□ -1.26
SSP120YLR250W RPS7AP26786 190 aaKnown RBP7.15□□□□□ -1.26
SSP120YLR250W SWC3P31376 625 aa7.15□□□□□ -1.26
SSP120YLR250W UTP7P40055 554 aaKnown RBP7.15□□□□□ -1.26
SSP120YLR250W YJR008WP47085 338 aa7.15□□□□□ -1.26
SSP120YLR250W IRC4Q03036 179 aa7.15□□□□□ -1.26
SSP120YLR250W PSH1Q12161 406 aa7.15□□□□□ -1.26
SSP120YLR250W SRF1Q12516 437 aa7.15□□□□□ -1.26
SSP120YLR250W LCB1P25045 558 aaKnown RBP7.14□□□□□ -1.27
SSP120YLR250W PCS60P38137 543 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
SSP120YLR250W MTC3P53077 123 aa7.14□□□□□ -1.27
SSP120YLR250W PRP42Q03776 544 aaKnown RBP7.14□□□□□ -1.27
SSP120YLR250W YDL144CQ07589 356 aa7.14□□□□□ -1.27
SSP120YLR250W GSC2P40989 1895 aa7.13□□□□□ -1.27
SSP120YLR250W BSD2P38356 321 aa7.13□□□□□ -1.27
SSP120YLR250W YCK3P39962 524 aa7.13□□□□□ -1.27
SSP120YLR250W UBX2Q04228 584 aa7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms