RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W MON2P48563 1636 aaPredicted RBP12.25□□□□□ -0.45
SSP120YLR250W INO80P53115 1489 aa12.22□□□□□ -0.45
SSP120YLR250W DNA2P38859 1522 aa11.69□□□□□ -0.54
SSP120YLR250W SWR1Q05471 1514 aa11.67□□□□□ -0.54
SSP120YLR250W TY1B-DR4Q07793 1604 aa11.53□□□□□ -0.56
SSP120YLR250W TCB3Q03640 1545 aaKnown RBP11.5□□□□□ -0.57
SSP120YLR250W KOG1P38873 1557 aa11.45□□□□□ -0.58
SSP120YLR250W SGS1P35187 1447 aa11.34□□□□□ -0.59
SSP120YLR250W RSE1Q04693 1361 aaKnown RBP11.23□□□□□ -0.61
SSP120YLR250W HSL1P34244 1518 aa11.14□□□□□ -0.63
SSP120YLR250W SPT6P23615 1451 aaKnown RBP11.11□□□□□ -0.63
SSP120YLR250W SPA2P23201 1466 aaKnown RBP10.98□□□□□ -0.65
SSP120YLR250W ECM5Q03214 1411 aa10.9□□□□□ -0.66
SSP120YLR250W HIR3P47171 1648 aa10.89□□□□□ -0.67
SSP120YLR250W BUD4P47136 1447 aa10.77□□□□□ -0.68
SSP120YLR250W THO2P53552 1597 aaKnown RBP10.77□□□□□ -0.69
SSP120YLR250W MDS3P53094 1487 aa10.7□□□□□ -0.7
SSP120YLR250W MTC1P47018 478 aaKnown RBP10.69□□□□□ -0.7
SSP120YLR250W XRN1P22147 1528 aaKnown RBP10.68□□□□□ -0.7
SSP120YLR250W PEP1P32319 1579 aa10.6□□□□□ -0.71
SSP120YLR250W ATG2P53855 1592 aa10.52□□□□□ -0.72
SSP120YLR250W REV3P14284 1504 aa10.48□□□□□ -0.73
SSP120YLR250W SSN2P38931 1420 aa10.43□□□□□ -0.74
SSP120YLR250W BPT1P14772 1559 aa10.42□□□□□ -0.74
SSP120YLR250W TAF2P23255 1407 aa10.41□□□□□ -0.74
SSP120YLR250W SKI3P17883 1432 aaKnown RBP10.35□□□□□ -0.75
SSP120YLR250W SIN3P22579 1536 aa10.31□□□□□ -0.76
SSP120YLR250W SSK2P53599 1579 aa10.24□□□□□ -0.77
SSP120YLR250W YCF1P39109 1515 aaKnown RBP10.23□□□□□ -0.77
SSP120YLR250W ESP1Q03018 1630 aa10.21□□□□□ -0.78
SSP120YLR250W UFD4P33202 1483 aa10.16□□□□□ -0.78
SSP120YLR250W SCC2Q04002 1493 aa10.09□□□□□ -0.79
SSP120YLR250W YPK9Q12697 1472 aa10.04□□□□□ -0.8
SSP120YLR250W DRS1P32892 752 aaKnown RBP10.03□□□□□ -0.8
SSP120YLR250W TY2B-LR1P0C2J3 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-FP0CX63 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-GR2P0CX64 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-CP25384 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-DR2Q03494 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY1B-DR1Q03855 1755 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-DR3Q07791 1770 aaKnown RBP10.01□□□□□ -0.81
SSP120YLR250W TY2B-OR1Q12113 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-DR1Q12472 1770 aa10.01□□□□□ -0.81
SSP120YLR250W TY2B-OR2Q12501 1770 aa10.01□□□□□ -0.81
SSP120YLR250W MYO2P19524 1574 aaKnown RBP10.01□□□□□ -0.81
SSP120YLR250W CDC25P04821 1589 aa10□□□□□ -0.81
SSP120YLR250W DNF1P32660 1571 aa10□□□□□ -0.81
SSP120YLR250W RPO31P04051 1460 aa9.99□□□□□ -0.81
SSP120YLR250W ESC1Q03661 1658 aaKnown RBP9.99□□□□□ -0.81
SSP120YLR250W CHD1P32657 1468 aa9.98□□□□□ -0.81
SSP120YLR250W TY1B-BRQ12193 1756 aa9.97□□□□□ -0.81
SSP120YLR250W TY1B-GR3Q12316 1755 aa9.97□□□□□ -0.81
SSP120YLR250W TY1B-ORQ92393 1755 aa9.97□□□□□ -0.81
SSP120YLR250W RQC2Q12532 1038 aaKnown RBP9.94□□□□□ -0.82
SSP120YLR250W MET5P47169 1442 aa9.88□□□□□ -0.83
SSP120YLR250W TY2B-BQ12491 1770 aa9.88□□□□□ -0.83
SSP120YLR250W PAN1P32521 1480 aa9.87□□□□□ -0.83
SSP120YLR250W RPA190P10964 1664 aaKnown RBP9.87□□□□□ -0.83
SSP120YLR250W RKR1Q04781 1562 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-HO13535 1793 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-DR5P0C2I2 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-DR6P0C2I3 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-LR2P0C2I5 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-LR3P0C2I6 1755 aaKnown RBP9.86□□□□□ -0.83
SSP120YLR250W TY1B-PR1P0C2I9 1755 aaKnown RBP9.86□□□□□ -0.83
SSP120YLR250W TY1B-PR2P0C2J0 1756 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-PR3P0C2J1 1755 aaKnown RBP9.86□□□□□ -0.83
SSP120YLR250W TY1B-JR1P47098 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-ML2Q03434 1755 aaKnown RBP9.86□□□□□ -0.83
SSP120YLR250W TY1B-ER1Q03612 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-ML1Q04711 1755 aaKnown RBP9.86□□□□□ -0.83
SSP120YLR250W TY1B-GR2Q12269 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-OLQ12273 1755 aa9.86□□□□□ -0.83
SSP120YLR250W TY1B-PLQ12414 1755 aaKnown RBP9.86□□□□□ -0.83
SSP120YLR250W TY1B-DR3Q99231 1755 aa9.85□□□□□ -0.83
SSP120YLR250W TOP2P06786 1428 aaKnown RBP9.81□□□□□ -0.84
SSP120YLR250W BNI1P41832 1953 aa9.8□□□□□ -0.84
SSP120YLR250W LTE1P07866 1435 aa9.79□□□□□ -0.84
SSP120YLR250W MMS22Q06164 1454 aa9.77□□□□□ -0.85
SSP120YLR250W MIF2P35201 549 aa9.75□□□□□ -0.85
SSP120YLR250W ITT1Q04638 464 aa9.71□□□□□ -0.86
SSP120YLR250W POL1P13382 1468 aa9.71□□□□□ -0.86
SSP120YLR250W TRM732Q03496 1420 aa9.7□□□□□ -0.86
SSP120YLR250W YRF1-1P0CX20 1796 aa9.7□□□□□ -0.86
SSP120YLR250W YRF1-5P0CX21 1796 aa9.7□□□□□ -0.86
SSP120YLR250W YRF1-8P0CX22 1796 aa9.7□□□□□ -0.86
SSP120YLR250W GEA2P39993 1459 aaKnown RBP9.69□□□□□ -0.86
SSP120YLR250W STU1P38198 1513 aa9.66□□□□□ -0.86
SSP120YLR250W TY1B-JR2P47100 1755 aaKnown RBP9.65□□□□□ -0.86
SSP120YLR250W TY1B-ER2Q03619 1755 aa9.65□□□□□ -0.86
SSP120YLR250W TY1B-MR1Q04214 1755 aa9.65□□□□□ -0.86
SSP120YLR250W TY1B-MR2Q04670 1755 aaKnown RBP9.65□□□□□ -0.86
SSP120YLR250W TY1B-LR1Q12088 1755 aaKnown RBP9.65□□□□□ -0.86
SSP120YLR250W TY1B-NL1Q12112 1755 aa9.65□□□□□ -0.86
SSP120YLR250W TY1B-GR1Q12141 1755 aa9.65□□□□□ -0.86
SSP120YLR250W TY1B-BLQ12490 1755 aa9.65□□□□□ -0.86
SSP120YLR250W YOR1P53049 1477 aa9.65□□□□□ -0.87
SSP120YLR250W NUP159P40477 1460 aa9.64□□□□□ -0.87
SSP120YLR250W SPP41P38904 1435 aa9.63□□□□□ -0.87
SSP120YLR250W SMC4Q12267 1418 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms