RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W FIG2P25653 1609 aa7.23□□□□□ -1.25
SEC13YLR208W CAF20P12962 161 aaKnown RBP7.23□□□□□ -1.25
SEC13YLR208W PDI1P17967 522 aaKnown RBP7.23□□□□□ -1.25
SEC13YLR208W YKU70P32807 602 aa7.23□□□□□ -1.25
SEC13YLR208W BUD27P43573 796 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
SEC13YLR208W HGH1P48362 394 aaKnown RBP7.23□□□□□ -1.25
SEC13YLR208W YML020WQ03722 664 aa7.23□□□□□ -1.25
SEC13YLR208W SRF1Q12516 437 aa7.23□□□□□ -1.25
SEC13YLR208W NUP145P49687 1317 aa7.23□□□□□ -1.25
SEC13YLR208W VMA1P17255 1071 aaKnown RBP7.22□□□□□ -1.25
SEC13YLR208W TEA1P47988 759 aa7.22□□□□□ -1.25
SEC13YLR208W RTF1P53064 558 aa7.22□□□□□ -1.25
SEC13YLR208W LPD1P09624 499 aaKnown RBP7.21□□□□□ -1.26
SEC13YLR208W PAM1P37304 830 aaKnown RBP7.21□□□□□ -1.26
SEC13YLR208W FET4P40988 552 aa7.21□□□□□ -1.26
SEC13YLR208W TIF6Q12522 245 aaKnown RBP7.21□□□□□ -1.26
SEC13YLR208W SPB4P25808 606 aaPredicted RBP7.2□□□□□ -1.26
SEC13YLR208W FKH1P40466 484 aa7.19□□□□□ -1.26
SEC13YLR208W HIM1Q06674 414 aa7.19□□□□□ -1.26
SEC13YLR208W WSC3Q12215 556 aa7.19□□□□□ -1.26
SEC13YLR208W YBL029C-AQ3E756 94 aa7.19□□□□□ -1.26
SEC13YLR208W COQ8P27697 501 aa7.18□□□□□ -1.26
SEC13YLR208W IRC3Q06683 689 aa7.18□□□□□ -1.26
SEC13YLR208W BDF2Q07442 638 aa7.18□□□□□ -1.26
SEC13YLR208W NOP8Q08287 484 aaPredicted RBP7.18□□□□□ -1.26
SEC13YLR208W SET1P38827 1080 aaKnown RBP7.17□□□□□ -1.26
SEC13YLR208W VNX1P42839 908 aa7.17□□□□□ -1.26
SEC13YLR208W SAM3Q08986 587 aa7.17□□□□□ -1.26
SEC13YLR208W GRX6Q12438 231 aa7.17□□□□□ -1.26
SEC13YLR208W PMD1P32634 1753 aa7.17□□□□□ -1.26
SEC13YLR208W SIT4P20604 311 aa7.16□□□□□ -1.26
SEC13YLR208W GLC3P32775 704 aa7.16□□□□□ -1.26
SEC13YLR208W MAL31P38156 614 aa7.16□□□□□ -1.26
SEC13YLR208W PEA2P40091 420 aa7.16□□□□□ -1.26
SEC13YLR208W NCS6P53088 359 aa7.16□□□□□ -1.26
SEC13YLR208W TIM50Q02776 476 aa7.16□□□□□ -1.26
SEC13YLR208W RAT1Q02792 1006 aaKnown RBP7.16□□□□□ -1.26
SEC13YLR208W TYW1Q08960 810 aaKnown RBP7.16□□□□□ -1.26
SEC13YLR208W AIM7Q12156 149 aa7.16□□□□□ -1.26
SEC13YLR208W GRX4P32642 244 aa7.15□□□□□ -1.26
SEC13YLR208W SER1P33330 395 aaKnown RBP7.15□□□□□ -1.26
SEC13YLR208W TAP42Q04372 366 aa7.15□□□□□ -1.26
SEC13YLR208W NOP53Q12080 455 aaKnown RBP7.15□□□□□ -1.26
SEC13YLR208W UTP10P42945 1769 aaKnown RBP7.15□□□□□ -1.27
SEC13YLR208W HVG1P0CE11 249 aa7.14□□□□□ -1.27
SEC13YLR208W MSM1P22438 575 aa7.14□□□□□ -1.27
SEC13YLR208W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27not detected
SEC13YLR208W RMT2Q03305 412 aa7.14□□□□□ -1.27
SEC13YLR208W VPS13Q07878 3144 aa7.13□□□□□ -1.27
SEC13YLR208W HSP104P31539 908 aaKnown RBP7.13□□□□□ -1.27
SEC13YLR208W EMP47P43555 445 aa7.13□□□□□ -1.27
SEC13YLR208W YGL082WP53155 381 aa7.13□□□□□ -1.27
SEC13YLR208W SPP1Q03012 353 aa7.13□□□□□ -1.27
SEC13YLR208W DPL1Q05567 589 aa7.13□□□□□ -1.27
SEC13YLR208W YOL036WQ08206 761 aa7.13□□□□□ -1.27
SEC13YLR208W EDS1P38073 919 aa7.12□□□□□ -1.27
SEC13YLR208W YFR016CP43597 1233 aaKnown RBP7.12□□□□□ -1.27
SEC13YLR208W DSD1P53095 428 aa7.12□□□□□ -1.27
SEC13YLR208W UBP16Q02863 499 aa7.12□□□□□ -1.27
SEC13YLR208W CWC15Q03772 175 aaKnown RBP7.12□□□□□ -1.27
SEC13YLR208W PHM7Q12252 991 aa7.12□□□□□ -1.27
SEC13YLR208W FAS2P19097 1887 aaKnown RBP7.11□□□□□ -1.27
SEC13YLR208W PTC3P34221 468 aaKnown RBP7.11□□□□□ -1.27
SEC13YLR208W EAP1P36041 632 aaKnown RBP7.11□□□□□ -1.27
SEC13YLR208W TIF11P38912 153 aaKnown RBP7.11□□□□□ -1.27
SEC13YLR208W SLX8P40072 274 aa7.11□□□□□ -1.27
SEC13YLR208W SET4P42948 560 aa7.11□□□□□ -1.27
SEC13YLR208W VPS4P52917 437 aa7.11□□□□□ -1.27
SEC13YLR208W TRM44Q02648 567 aaKnown RBP7.11□□□□□ -1.27
SEC13YLR208W GYP5Q12344 894 aa7.11□□□□□ -1.27
SEC13YLR208W YGR117CP53270 476 aa7.1□□□□□ -1.27
SEC13YLR208W STV1P37296 890 aa7.09□□□□□ -1.27
SEC13YLR208W BSD2P38356 321 aa7.09□□□□□ -1.27
SEC13YLR208W SNU71P53207 620 aaKnown RBP7.09□□□□□ -1.27
SEC13YLR208W MDG1P53885 366 aa7.09□□□□□ -1.27
SEC13YLR208W DIB1Q06819 143 aaPredicted RBP7.09□□□□□ -1.27
SEC13YLR208W ALE1Q08548 619 aa7.09□□□□□ -1.27
SEC13YLR208W CSR2Q12734 1121 aa7.09□□□□□ -1.27
SEC13YLR208W MOT2P34909 587 aaKnown RBP7.08□□□□□ -1.28
SEC13YLR208W PNT1P38969 423 aa7.08□□□□□ -1.28
SEC13YLR208W CTF4Q01454 927 aa7.08□□□□□ -1.28
SEC13YLR208W HPR1P17629 752 aaKnown RBP7.07□□□□□ -1.28
SEC13YLR208W FRD1P32614 470 aaKnown RBP7.07□□□□□ -1.28
SEC13YLR208W ATH1P48016 1211 aa7.07□□□□□ -1.28
SEC13YLR208W YVH1Q02256 364 aaKnown RBP7.07□□□□□ -1.28
SEC13YLR208W KIN1P13185 1064 aa7.06□□□□□ -1.28
SEC13YLR208W ARG8P18544 423 aa7.06□□□□□ -1.28
SEC13YLR208W ULI1P43604 169 aa7.06□□□□□ -1.28
SEC13YLR208W SAS4Q04003 481 aa7.06□□□□□ -1.28
SEC13YLR208W GUT1P32190 709 aa7.05□□□□□ -1.28
SEC13YLR208W PCS60P38137 543 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
SEC13YLR208W GEF1P37020 779 aa7.04□□□□□ -1.28
SEC13YLR208W APE3P37302 537 aaKnown RBP7.04□□□□□ -1.28
SEC13YLR208W SYF1Q04048 859 aaPredicted RBP7.04□□□□□ -1.28
SEC13YLR208W GAS5Q08193 484 aa7.04□□□□□ -1.28
SEC13YLR208W LYS2P07702 1392 aa7.04□□□□□ -1.28
SEC13YLR208W YPR117WQ06116 2489 aa7.04□□□□□ -1.28
SEC13YLR208W HTA1P04911 132 aaKnown RBP7.03□□□□□ -1.28
SEC13YLR208W HTA2P04912 132 aa7.03□□□□□ -1.28
SEC13YLR208W AFG2P32794 780 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms