RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W MON2P48563 1636 aaPredicted RBP12.51□□□□□ -0.41
SEC13YLR208W INO80P53115 1489 aa12.46□□□□□ -0.42
SEC13YLR208W DNA2P38859 1522 aa11.91□□□□□ -0.5
SEC13YLR208W SWR1Q05471 1514 aa11.75□□□□□ -0.53
SEC13YLR208W MTC1P47018 478 aaKnown RBP11.67□□□□□ -0.54
SEC13YLR208W RSE1Q04693 1361 aaKnown RBP11.62□□□□□ -0.55
SEC13YLR208W KOG1P38873 1557 aa11.62□□□□□ -0.55
SEC13YLR208W TY1B-DR4Q07793 1604 aa11.45□□□□□ -0.58
SEC13YLR208W DRS1P32892 752 aaKnown RBP11.42□□□□□ -0.58
SEC13YLR208W TCB3Q03640 1545 aaKnown RBP11.4□□□□□ -0.58
SEC13YLR208W SPA2P23201 1466 aaKnown RBP11.06□□□□□ -0.64
SEC13YLR208W HSL1P34244 1518 aa10.99□□□□□ -0.65
SEC13YLR208W SGS1P35187 1447 aa10.97□□□□□ -0.65
SEC13YLR208W SPT6P23615 1451 aaKnown RBP10.96□□□□□ -0.65
SEC13YLR208W ECM5Q03214 1411 aa10.9□□□□□ -0.66
SEC13YLR208W BUD4P47136 1447 aa10.75□□□□□ -0.69
SEC13YLR208W THO2P53552 1597 aaKnown RBP10.73□□□□□ -0.69
SEC13YLR208W HIR3P47171 1648 aa10.71□□□□□ -0.69
SEC13YLR208W MDS3P53094 1487 aa10.71□□□□□ -0.69
SEC13YLR208W REV3P14284 1504 aa10.59□□□□□ -0.71
SEC13YLR208W PEP1P32319 1579 aa10.56□□□□□ -0.72
SEC13YLR208W XRN1P22147 1528 aaKnown RBP10.44□□□□□ -0.74
SEC13YLR208W FAP1P53971 965 aa10.44□□□□□ -0.74
SEC13YLR208W BPT1P14772 1559 aa10.42□□□□□ -0.74
SEC13YLR208W ATG2P53855 1592 aa10.4□□□□□ -0.74
SEC13YLR208W YCF1P39109 1515 aaKnown RBP10.24□□□□□ -0.77
SEC13YLR208W MIF2P35201 549 aa10.24□□□□□ -0.77
SEC13YLR208W SKI3P17883 1432 aaKnown RBP10.16□□□□□ -0.78
SEC13YLR208W SSK2P53599 1579 aa10.14□□□□□ -0.79
SEC13YLR208W TAF2P23255 1407 aa10.13□□□□□ -0.79
SEC13YLR208W SIN3P22579 1536 aa10.06□□□□□ -0.8
SEC13YLR208W UFD4P33202 1483 aa10.01□□□□□ -0.81
SEC13YLR208W MYO2P19524 1574 aaKnown RBP9.99□□□□□ -0.81
SEC13YLR208W PRY3P47033 881 aa9.98□□□□□ -0.81
SEC13YLR208W MET5P47169 1442 aa9.97□□□□□ -0.81
SEC13YLR208W DNF1P32660 1571 aa9.97□□□□□ -0.81
SEC13YLR208W LTE1P07866 1435 aa9.93□□□□□ -0.82
SEC13YLR208W CDC25P04821 1589 aa9.92□□□□□ -0.82
SEC13YLR208W SSN2P38931 1420 aa9.92□□□□□ -0.82
SEC13YLR208W BNI1P41832 1953 aa9.92□□□□□ -0.82
SEC13YLR208W CHD1P32657 1468 aa9.91□□□□□ -0.82
SEC13YLR208W ESP1Q03018 1630 aa9.89□□□□□ -0.83
SEC13YLR208W YFR006WP43590 535 aa9.89□□□□□ -0.83
SEC13YLR208W SCC2Q04002 1493 aa9.89□□□□□ -0.83
SEC13YLR208W RPA190P10964 1664 aaKnown RBP9.84□□□□□ -0.83
SEC13YLR208W BFR2Q06631 534 aaKnown RBP9.84□□□□□ -0.83
SEC13YLR208W ITT1Q04638 464 aa9.83□□□□□ -0.84
SEC13YLR208W YPK9Q12697 1472 aa9.83□□□□□ -0.84
SEC13YLR208W RKR1Q04781 1562 aa9.83□□□□□ -0.84
SEC13YLR208W ESC1Q03661 1658 aaKnown RBP9.83□□□□□ -0.84
SEC13YLR208W DIP2Q12220 943 aaPredicted RBP9.82□□□□□ -0.84
SEC13YLR208W RPO31P04051 1460 aa9.81□□□□□ -0.84
SEC13YLR208W ABP1P15891 592 aaKnown RBP9.79□□□□□ -0.84
SEC13YLR208W PAN1P32521 1480 aa9.77□□□□□ -0.85
SEC13YLR208W GEA2P39993 1459 aaKnown RBP9.77□□□□□ -0.85
SEC13YLR208W TY1B-BRQ12193 1756 aa9.75□□□□□ -0.85
SEC13YLR208W TY1B-GR3Q12316 1755 aa9.75□□□□□ -0.85
SEC13YLR208W TY1B-ORQ92393 1755 aa9.75□□□□□ -0.85
SEC13YLR208W RQC2Q12532 1038 aaKnown RBP9.74□□□□□ -0.85
SEC13YLR208W TY2B-LR1P0C2J3 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-FP0CX63 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-GR2P0CX64 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-CP25384 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-DR2Q03494 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY1B-DR1Q03855 1755 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-DR3Q07791 1770 aaKnown RBP9.73□□□□□ -0.85
SEC13YLR208W TY2B-OR1Q12113 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-DR1Q12472 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TY2B-OR2Q12501 1770 aa9.73□□□□□ -0.85
SEC13YLR208W TFA1P36100 482 aa9.72□□□□□ -0.85
SEC13YLR208W MMS1Q06211 1407 aa9.72□□□□□ -0.85
SEC13YLR208W IRC20Q06554 1556 aa9.67□□□□□ -0.86
SEC13YLR208W ISW2Q08773 1120 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-HO13535 1793 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-DR5P0C2I2 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-DR6P0C2I3 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-LR2P0C2I5 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-LR3P0C2I6 1755 aaKnown RBP9.6□□□□□ -0.87
SEC13YLR208W TY1B-PR1P0C2I9 1755 aaKnown RBP9.6□□□□□ -0.87
SEC13YLR208W TY1B-PR2P0C2J0 1756 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-PR3P0C2J1 1755 aaKnown RBP9.6□□□□□ -0.87
SEC13YLR208W TY1B-JR1P47098 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-ML2Q03434 1755 aaKnown RBP9.6□□□□□ -0.87
SEC13YLR208W TY1B-ER1Q03612 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-ML1Q04711 1755 aaKnown RBP9.6□□□□□ -0.87
SEC13YLR208W TY1B-GR2Q12269 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-OLQ12273 1755 aa9.6□□□□□ -0.87
SEC13YLR208W TY1B-PLQ12414 1755 aaKnown RBP9.6□□□□□ -0.87
SEC13YLR208W MMS22Q06164 1454 aa9.59□□□□□ -0.87
SEC13YLR208W TOP2P06786 1428 aaKnown RBP9.58□□□□□ -0.88
SEC13YLR208W TY2B-BQ12491 1770 aa9.58□□□□□ -0.88
SEC13YLR208W AVT3P36062 692 aa9.58□□□□□ -0.88
SEC13YLR208W DRS2P39524 1355 aa9.58□□□□□ -0.88
SEC13YLR208W TRM732Q03496 1420 aa9.57□□□□□ -0.88
SEC13YLR208W YCK3P39962 524 aa9.57□□□□□ -0.88
SEC13YLR208W YRF1-1P0CX20 1796 aa9.55□□□□□ -0.88
SEC13YLR208W YRF1-5P0CX21 1796 aa9.55□□□□□ -0.88
SEC13YLR208W YRF1-8P0CX22 1796 aa9.55□□□□□ -0.88
SEC13YLR208W VPS15P22219 1454 aa9.55□□□□□ -0.88
SEC13YLR208W NUP159P40477 1460 aa9.53□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms