RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W MRX12P47084 519 aa6.03□□□□□ -1.44
PWP1YLR196W PRP43P53131 767 aaKnown RBP6.03□□□□□ -1.44
PWP1YLR196W BNI5P53890 448 aaKnown RBP6.03□□□□□ -1.44
PWP1YLR196W KEX2P13134 814 aa6.02□□□□□ -1.45
PWP1YLR196W KAR3P17119 729 aa6.02□□□□□ -1.45
PWP1YLR196W PSO2P30620 661 aa6.02□□□□□ -1.45
PWP1YLR196W HOS2P53096 452 aaPredicted RBP6.02□□□□□ -1.45
PWP1YLR196W VPS30Q02948 557 aa6.02□□□□□ -1.45
PWP1YLR196W ARR1Q06596 294 aa6.02□□□□□ -1.45
PWP1YLR196W HSP42Q12329 375 aa6.02□□□□□ -1.45
PWP1YLR196W ALD2P47771 506 aa6.02□□□□□ -1.45
PWP1YLR196W PXR1P53335 271 aaPredicted RBP6.02□□□□□ -1.45
PWP1YLR196W YNL247WP53852 767 aaKnown RBP6.02□□□□□ -1.45
PWP1YLR196W BNI4P53858 892 aa6.02□□□□□ -1.45
PWP1YLR196W RVB2Q12464 471 aaKnown RBP6.02□□□□□ -1.45
PWP1YLR196W SEC6P32844 805 aa6.01□□□□□ -1.45
PWP1YLR196W BDP1P46678 594 aa6.01□□□□□ -1.45
PWP1YLR196W GYP7P48365 746 aa6.01□□□□□ -1.45
PWP1YLR196W JJJ1P53863 590 aa6.01□□□□□ -1.45
PWP1YLR196W RIA1P53893 1110 aa6.01□□□□□ -1.45
PWP1YLR196W SAC3P46674 1301 aa6□□□□□ -1.45
PWP1YLR196W SWI6P09959 803 aa6□□□□□ -1.45
PWP1YLR196W YEF3P16521 1044 aaKnown RBP6□□□□□ -1.45
PWP1YLR196W UBP1P25037 809 aa6□□□□□ -1.45
PWP1YLR196W SLN1P39928 1220 aaPredicted RBP6□□□□□ -1.45
PWP1YLR196W COG8Q04632 607 aa6□□□□□ -1.45
PWP1YLR196W RSC2Q06488 889 aa6□□□□□ -1.45
PWP1YLR196W CDC45Q08032 650 aa6□□□□□ -1.45
PWP1YLR196W SGT2Q12118 346 aaKnown RBP6□□□□□ -1.45
PWP1YLR196W GCD6P32501 712 aaKnown RBP5.99□□□□□ -1.45
PWP1YLR196W STE5P32917 917 aa5.99□□□□□ -1.45
PWP1YLR196W KDX1P36005 433 aa5.99□□□□□ -1.45
PWP1YLR196W BCH2P36122 765 aa5.99□□□□□ -1.45
PWP1YLR196W MAP2P38174 421 aaKnown RBP5.99□□□□□ -1.45
PWP1YLR196W HST2P53686 357 aa5.99□□□□□ -1.45
PWP1YLR196W PUS1Q12211 544 aaKnown RBP5.99□□□□□ -1.45
PWP1YLR196W CDC31P06704 161 aaKnown RBP5.99□□□□□ -1.45
PWP1YLR196W OPI1P21957 404 aa5.99□□□□□ -1.45
PWP1YLR196W BRF1P29056 596 aa5.99□□□□□ -1.45
PWP1YLR196W MRF1P30775 413 aaPredicted RBP5.99□□□□□ -1.45
PWP1YLR196W LAM1P38851 1228 aa5.99□□□□□ -1.45
PWP1YLR196W VPS27P40343 622 aaKnown RBP5.99□□□□□ -1.45
PWP1YLR196W ITC1P53125 1264 aa5.99□□□□□ -1.45
PWP1YLR196W ATG26Q06321 1198 aa5.99□□□□□ -1.45
PWP1YLR196W YAH1Q12184 172 aaKnown RBP5.99□□□□□ -1.45
PWP1YLR196W APC2Q12440 853 aa5.99□□□□□ -1.45
PWP1YLR196W PUP2P32379 260 aa5.98□□□□□ -1.45
PWP1YLR196W ZUO1P32527 433 aaKnown RBP5.98□□□□□ -1.45
PWP1YLR196W BLI1P35727 113 aa5.98□□□□□ -1.45
PWP1YLR196W DSF2P38213 736 aa5.98□□□□□ -1.45
PWP1YLR196W YGL081WP53156 320 aa5.98□□□□□ -1.45
PWP1YLR196W MDM38Q08179 573 aa5.98□□□□□ -1.45
PWP1YLR196W LSO1Q3E827 93 aa5.98□□□□□ -1.45
PWP1YLR196W RPP0P05317 312 aaKnown RBP5.97□□□□□ -1.45
PWP1YLR196W THR4P16120 514 aaKnown RBP5.97□□□□□ -1.45
PWP1YLR196W SPB4P25808 606 aaPredicted RBP5.97□□□□□ -1.45
PWP1YLR196W ESL2P36168 1195 aa5.97□□□□□ -1.45
PWP1YLR196W IAH1P41734 238 aa5.97□□□□□ -1.45
PWP1YLR196W YPP1P46951 817 aa5.97□□□□□ -1.45
PWP1YLR196W KEL2P50090 882 aa5.97□□□□□ -1.45
PWP1YLR196W PCL8Q08966 492 aa5.97□□□□□ -1.45
PWP1YLR196W CEX1Q12453 761 aa5.97□□□□□ -1.45
PWP1YLR196W RAD3P06839 778 aa5.96□□□□□ -1.45
PWP1YLR196W RAD16P31244 790 aa5.96□□□□□ -1.45
PWP1YLR196W EFB1P32471 206 aaKnown RBP5.96□□□□□ -1.45
PWP1YLR196W RTG3P38165 486 aa5.96□□□□□ -1.45
PWP1YLR196W ERP2P39704 215 aa5.96□□□□□ -1.45
PWP1YLR196W MGA2P40578 1113 aa5.96□□□□□ -1.45
PWP1YLR196W RSM7P47150 247 aa5.96□□□□□ -1.45
PWP1YLR196W HUL5P53119 910 aa5.96□□□□□ -1.45
PWP1YLR196W RSC1P53236 928 aa5.96□□□□□ -1.45
PWP1YLR196W RUD3Q12234 484 aaKnown RBP5.96□□□□□ -1.45
PWP1YLR196W EDE1P34216 1381 aa5.96□□□□□ -1.45
PWP1YLR196W PPH3P32345 308 aa5.96□□□□□ -1.46
PWP1YLR196W SCY1P53009 804 aa5.96□□□□□ -1.46
PWP1YLR196W CTF4Q01454 927 aa5.96□□□□□ -1.46
PWP1YLR196W JIP5Q06214 492 aaPredicted RBP5.96□□□□□ -1.46
PWP1YLR196W RRP9Q06506 573 aaKnown RBP5.96□□□□□ -1.46
PWP1YLR196W YDL144CQ07589 356 aa5.96□□□□□ -1.46
PWP1YLR196W APC5Q08683 685 aa5.96□□□□□ -1.46
PWP1YLR196W NOT3P06102 836 aaKnown RBP5.95□□□□□ -1.46
PWP1YLR196W CMP2P14747 604 aa5.95□□□□□ -1.46
PWP1YLR196W SUI2P20459 304 aaKnown RBP5.95□□□□□ -1.46
PWP1YLR196W SPT5P27692 1063 aaKnown RBP5.95□□□□□ -1.46
PWP1YLR196W YMR1P47147 688 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
PWP1YLR196W YDR338CQ05497 695 aa5.95□□□□□ -1.46
PWP1YLR196W UTP4Q06679 776 aaKnown RBP5.95□□□□□ -1.46
PWP1YLR196W SLP1Q12232 587 aa5.95□□□□□ -1.46
PWP1YLR196W TY4A-HQ6Q5P6 413 aa5.95□□□□□ -1.46
PWP1YLR196W TRK1P12685 1235 aa5.94□□□□□ -1.46
PWP1YLR196W SPE2P21182 396 aa5.94□□□□□ -1.46
PWP1YLR196W EFM2P38347 419 aa5.94□□□□□ -1.46
PWP1YLR196W BEM4P39011 633 aa5.94□□□□□ -1.46
PWP1YLR196W SIT1P39980 628 aa5.94□□□□□ -1.46
PWP1YLR196W BFA1P47113 574 aa5.94□□□□□ -1.46
PWP1YLR196W YNL050CP53952 270 aa5.94□□□□□ -1.46
PWP1YLR196W SEC23P15303 768 aaKnown RBP5.94□□□□□ -1.46
PWP1YLR196W MUM2P38236 366 aa5.94□□□□□ -1.46
PWP1YLR196W HXT5P38695 592 aa5.94□□□□□ -1.46
PWP1YLR196W NOC2P39744 710 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms