RNA–Protein interactions for RNA: YKL183W

LOT5, Transcript of Protein of unknown function, yeast

Gene LOT5, Length 921 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOT5	YKL183W	NUP133	P36161	1157 aa		11.7	□□□□□ -0.54
LOT5	YKL183W	SYF1	Q04048	859 aa	Predicted RBP	11.7	□□□□□ -0.54
LOT5	YKL183W	CDC45	Q08032	650 aa		11.7	□□□□□ -0.54
LOT5	YKL183W	RPS9B	P05755	195 aa	Known RBP	11.69	□□□□□ -0.54
LOT5	YKL183W	FPK1	P53739	893 aa		11.69	□□□□□ -0.54
LOT5	YKL183W	ICL1	P28240	557 aa	Predicted RBP	11.68	□□□□□ -0.54
LOT5	YKL183W	FCP1	Q03254	732 aa		11.68	□□□□□ -0.54
LOT5	YKL183W	SAS4	Q04003	481 aa		11.68	□□□□□ -0.54
LOT5	YKL183W	GRX6	Q12438	231 aa		11.68	□□□□□ -0.54
LOT5	YKL183W	TOP1	P04786	769 aa		11.67	□□□□□ -0.54
LOT5	YKL183W	FRD1	P32614	470 aa	Known RBP	11.67	□□□□□ -0.54
LOT5	YKL183W	RPN1	P38764	993 aa	Known RBP	11.67	□□□□□ -0.54
LOT5	YKL183W	SET1	P38827	1080 aa	Known RBP	11.67	□□□□□ -0.54
LOT5	YKL183W	HKR1	P41809	1802 aa		11.67	□□□□□ -0.54
LOT5	YKL183W	YKU70	P32807	602 aa		11.65	□□□□□ -0.54
LOT5	YKL183W	SHC1	P39000	512 aa		11.65	□□□□□ -0.54
LOT5	YKL183W	MAK21	Q12176	1025 aa	Known RBP	11.65	□□□□□ -0.54
LOT5	YKL183W	YGR122W	P53272	402 aa		11.64	□□□□□ -0.55
LOT5	YKL183W	RVB2	Q12464	471 aa	Known RBP	11.64	□□□□□ -0.55
LOT5	YKL183W	SAC3	P46674	1301 aa		11.63	□□□□□ -0.55
LOT5	YKL183W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.63	□□□□□ -0.55	not detected
LOT5	YKL183W	YRB30	P53107	440 aa	Predicted RBP	11.63	□□□□□ -0.55
LOT5	YKL183W	ITC1	P53125	1264 aa		11.63	□□□□□ -0.55
LOT5	YKL183W	ATG20	Q07528	640 aa		11.63	□□□□□ -0.55
LOT5	YKL183W	RAD24	P32641	659 aa		11.62	□□□□□ -0.55
LOT5	YKL183W	YPP1	P46951	817 aa		11.62	□□□□□ -0.55
LOT5	YKL183W	NOP8	Q08287	484 aa	Predicted RBP	11.62	□□□□□ -0.55
LOT5	YKL183W	FAS2	P19097	1887 aa	Known RBP	11.61	□□□□□ -0.55
LOT5	YKL183W	PSH1	Q12161	406 aa		11.61	□□□□□ -0.55
LOT5	YKL183W	RET1	P22276	1149 aa	Known RBP	11.6	□□□□□ -0.55
LOT5	YKL183W	SWC3	P31376	625 aa		11.6	□□□□□ -0.55
LOT5	YKL183W	SLI15	P38283	698 aa		11.6	□□□□□ -0.55
LOT5	YKL183W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	not detected
LOT5	YKL183W	DIP2	Q12220	943 aa	Predicted RBP	11.6	□□□□□ -0.55
LOT5	YKL183W	DPH6	Q12429	685 aa		11.6	□□□□□ -0.55
LOT5	YKL183W	MTC5	Q03897	1148 aa		11.59	□□□□□ -0.55
LOT5	YKL183W	UBP12	P39538	1254 aa		11.58	□□□□□ -0.56
LOT5	YKL183W	BOI2	P39969	1040 aa		11.58	□□□□□ -0.56
LOT5	YKL183W	CSI1	Q04368	295 aa		11.58	□□□□□ -0.56
LOT5	YKL183W	FIG2	P25653	1609 aa		11.57	□□□□□ -0.56
LOT5	YKL183W	RPS19A	P07280	144 aa	Known RBP	11.57	□□□□□ -0.56
LOT5	YKL183W	RPS19B	P07281	144 aa	Predicted RBP	11.57	□□□□□ -0.56
LOT5	YKL183W	ICP55	P40051	511 aa		11.57	□□□□□ -0.56
LOT5	YKL183W	SSA4	P22202	642 aa	Known RBP	11.56	□□□□□ -0.56
LOT5	YKL183W	KRE2	P27809	442 aa		11.56	□□□□□ -0.56
LOT5	YKL183W	PEX21	P50091	288 aa		11.56	□□□□□ -0.56
LOT5	YKL183W	DPL1	Q05567	589 aa		11.56	□□□□□ -0.56
LOT5	YKL183W	PUS5	Q06244	254 aa		11.56	□□□□□ -0.56
LOT5	YKL183W	YIL092W	P40497	633 aa		11.55	□□□□□ -0.56
LOT5	YKL183W	SET4	P42948	560 aa		11.55	□□□□□ -0.56
LOT5	YKL183W	UBX2	Q04228	584 aa		11.55	□□□□□ -0.56
LOT5	YKL183W	YLR278C	Q05854	1341 aa		11.55	□□□□□ -0.56
LOT5	YKL183W	TRP5	P00931	707 aa	Known RBP	11.54	□□□□□ -0.56
LOT5	YKL183W	THS1	P04801	734 aa	Known RBP	11.54	□□□□□ -0.56
LOT5	YKL183W	SUP35	P05453	685 aa	Known RBP	11.54	□□□□□ -0.56
LOT5	YKL183W	RTG2	P32608	588 aa	Known RBP	11.54	□□□□□ -0.56
LOT5	YKL183W	PRS1	P32895	427 aa	Known RBP	11.54	□□□□□ -0.56
LOT5	YKL183W	DAL5	P15365	543 aa		11.53	□□□□□ -0.56
LOT5	YKL183W	MSM1	P22438	575 aa		11.53	□□□□□ -0.56
LOT5	YKL183W	SPL2	P38839	148 aa		11.53	□□□□□ -0.56
LOT5	YKL183W	THI3	Q07471	609 aa		11.53	□□□□□ -0.56
LOT5	YKL183W	DUR1,2	P32528	1835 aa	Known RBP	11.53	□□□□□ -0.56
LOT5	YKL183W	MGM1	P32266	881 aa		11.52	□□□□□ -0.57
LOT5	YKL183W	NGR1	P32831	672 aa	Known RBP	11.52	□□□□□ -0.57
LOT5	YKL183W	TIF4632	P39936	914 aa	Known RBP	11.52	□□□□□ -0.57
LOT5	YKL183W	HXT10	P43581	546 aa		11.52	□□□□□ -0.57
LOT5	YKL183W	RPT4	P53549	437 aa	Known RBP	11.52	□□□□□ -0.57
LOT5	YKL183W	SNU66	Q12420	587 aa	Predicted RBP	11.5	□□□□□ -0.57
LOT5	YKL183W	GLC3	P32775	704 aa		11.49	□□□□□ -0.57
LOT5	YKL183W	RAD2	P07276	1031 aa		11.48	□□□□□ -0.57
LOT5	YKL183W	FET4	P40988	552 aa		11.48	□□□□□ -0.57
LOT5	YKL183W	TIM50	Q02776	476 aa		11.48	□□□□□ -0.57
LOT5	YKL183W	SRC1	Q03707	834 aa		11.48	□□□□□ -0.57
LOT5	YKL183W	GAS5	Q08193	484 aa		11.48	□□□□□ -0.57
LOT5	YKL183W	ADR1	P07248	1323 aa		11.47	□□□□□ -0.57
LOT5	YKL183W	GAP1	P19145	602 aa	Predicted RBP	11.47	□□□□□ -0.57
LOT5	YKL183W	RRG1	Q12167	365 aa	Predicted RBP	11.47	□□□□□ -0.57
LOT5	YKL183W	AFG2	P32794	780 aa		11.45	□□□□□ -0.58
LOT5	YKL183W	YNG2	P38806	282 aa	Known RBP	11.45	□□□□□ -0.58
LOT5	YKL183W	NUG1	P40010	520 aa	Known RBP	11.45	□□□□□ -0.58
LOT5	YKL183W	TRM44	Q02648	567 aa	Known RBP	11.45	□□□□□ -0.58
LOT5	YKL183W	IRC4	Q03036	179 aa		11.45	□□□□□ -0.58
LOT5	YKL183W	CRF1	Q04930	467 aa		11.45	□□□□□ -0.58
LOT5	YKL183W	POM152	P39685	1337 aa		11.44	□□□□□ -0.58
LOT5	YKL183W	LCB1	P25045	558 aa	Known RBP	11.44	□□□□□ -0.58
LOT5	YKL183W	HGH1	P48362	394 aa	Known RBP	11.44	□□□□□ -0.58
LOT5	YKL183W	GCD7	P32502	381 aa	Predicted RBP	11.43	□□□□□ -0.58
LOT5	YKL183W	SSF1	P38789	453 aa	Predicted RBP	11.43	□□□□□ -0.58
LOT5	YKL183W	GSM1	P42950	618 aa		11.43	□□□□□ -0.58
LOT5	YKL183W	YGR117C	P53270	476 aa		11.43	□□□□□ -0.58
LOT5	YKL183W	SPO1	P53541	631 aa		11.43	□□□□□ -0.58
LOT5	YKL183W	PRP42	Q03776	544 aa	Known RBP	11.43	□□□□□ -0.58
LOT5	YKL183W	FLO11	P08640	1367 aa		11.42	□□□□□ -0.58
LOT5	YKL183W	STV1	P37296	890 aa		11.42	□□□□□ -0.58
LOT5	YKL183W	VPS4	P52917	437 aa		11.42	□□□□□ -0.58
LOT5	YKL183W	AIM7	Q12156	149 aa		11.42	□□□□□ -0.58
LOT5	YKL183W	VHR2	P40041	505 aa		11.41	□□□□□ -0.58
LOT5	YKL183W	EMP47	P43555	445 aa		11.41	□□□□□ -0.58
LOT5	YKL183W	TOS4	Q06266	489 aa		11.41	□□□□□ -0.58
LOT5	YKL183W	PSF3	Q12146	194 aa		11.41	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms