RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W HAT1Q12341 374 aa14.39□□□□□ -0.11
TCD2YKL027W BOI2P39969 1040 aa14.36□□□□□ -0.11
TCD2YKL027W TRP5P00931 707 aaKnown RBP14.35□□□□□ -0.11
TCD2YKL027W MSN5P52918 1224 aa14.35□□□□□ -0.11
TCD2YKL027W BDF2Q07442 638 aa14.35□□□□□ -0.11
TCD2YKL027W SWC3P31376 625 aa14.34□□□□□ -0.11
TCD2YKL027W PFF1P38244 976 aa14.34□□□□□ -0.11
TCD2YKL027W YKL222CP35995 705 aa14.32□□□□□ -0.12
TCD2YKL027W TFA1P36100 482 aa14.32□□□□□ -0.12
TCD2YKL027W ERT1P38140 529 aa14.32□□□□□ -0.12
TCD2YKL027W UBP12P39538 1254 aa14.32□□□□□ -0.12
TCD2YKL027W ITC1P53125 1264 aa14.32□□□□□ -0.12
TCD2YKL027W FCP1Q03254 732 aa14.32□□□□□ -0.12
TCD2YKL027W YNG2P38806 282 aaKnown RBP14.31□□□□□ -0.12
TCD2YKL027W IRC3Q06683 689 aa14.31□□□□□ -0.12
TCD2YKL027W SUP35P05453 685 aaKnown RBP14.3□□□□□ -0.12
TCD2YKL027W POL32P47110 350 aa14.3□□□□□ -0.12
TCD2YKL027W EAF6P47128 113 aa14.3□□□□□ -0.12
TCD2YKL027W MTC5Q03897 1148 aa14.3□□□□□ -0.12
TCD2YKL027W PSH1Q12161 406 aa14.3□□□□□ -0.12
TCD2YKL027W CTT1P06115 562 aa14.29□□□□□ -0.12
TCD2YKL027W SAC3P46674 1301 aa14.29□□□□□ -0.12
TCD2YKL027W FPR3P38911 411 aaKnown RBP14.28□□□□□ -0.12
TCD2YKL027W HGH1P48362 394 aaKnown RBP14.28□□□□□ -0.12
TCD2YKL027W SYF1Q04048 859 aaPredicted RBP14.28□□□□□ -0.12
TCD2YKL027W PUF6Q04373 656 aaKnown RBP14.28□□□□□ -0.12
TCD2YKL027W SIT4P20604 311 aa14.26□□□□□ -0.13
TCD2YKL027W SPO1P53541 631 aa14.26□□□□□ -0.13
TCD2YKL027W CWH41P53008 833 aa14.25□□□□□ -0.13
TCD2YKL027W ERO1Q03103 563 aa14.25□□□□□ -0.13
TCD2YKL027W SMY1P32364 656 aaKnown RBP14.24□□□□□ -0.13
TCD2YKL027W GCD7P32502 381 aaPredicted RBP14.24□□□□□ -0.13
TCD2YKL027W UBP16Q02863 499 aa14.24□□□□□ -0.13
TCD2YKL027W PMD1P32634 1753 aa14.23□□□□□ -0.13
TCD2YKL027W YER156CP40093 338 aaKnown RBP14.22□□□□□ -0.13
TCD2YKL027W RPN1P38764 993 aaKnown RBP14.2□□□□□ -0.14
TCD2YKL027W SSF1P38789 453 aaPredicted RBP14.2□□□□□ -0.14
TCD2YKL027W ILV3P39522 585 aaKnown RBP14.2□□□□□ -0.14
TCD2YKL027W KIN4Q01919 800 aa14.2□□□□□ -0.14
TCD2YKL027W SAS4Q04003 481 aa14.2□□□□□ -0.14
TCD2YKL027W FRD1P32614 470 aaKnown RBP14.19□□□□□ -0.14
TCD2YKL027W SNU66Q12420 587 aaPredicted RBP14.19□□□□□ -0.14
TCD2YKL027W DPH6Q12429 685 aa14.19□□□□□ -0.14
TCD2YKL027W SSA1P10591 642 aaKnown RBP14.18□□□□□ -0.14
TCD2YKL027W CAF20P12962 161 aaKnown RBP14.17□□□□□ -0.14
TCD2YKL027W HXT10P43581 546 aa14.17□□□□□ -0.14
TCD2YKL027W GRX6Q12438 231 aa14.16□□□□□ -0.14
TCD2YKL027W NMD2P38798 1089 aaKnown RBP14.15□□□□□ -0.15
TCD2YKL027W ICP55P40051 511 aa14.15□□□□□ -0.15
TCD2YKL027W NCB2Q92317 146 aa14.15□□□□□ -0.15
TCD2YKL027W RPS9BP05755 195 aaKnown RBP14.13□□□□□ -0.15
TCD2YKL027W NGR1P32831 672 aaKnown RBP14.13□□□□□ -0.15
TCD2YKL027W ADR1P07248 1323 aa14.12□□□□□ -0.15
TCD2YKL027W THI3Q07471 609 aa14.12□□□□□ -0.15
TCD2YKL027W GYP5Q12344 894 aa14.12□□□□□ -0.15
TCD2YKL027W MGM1P32266 881 aa14.11□□□□□ -0.15
TCD2YKL027W YKU70P32807 602 aa14.11□□□□□ -0.15
TCD2YKL027W SRC1Q03707 834 aa14.11□□□□□ -0.15
TCD2YKL027W UBX2Q04228 584 aa14.11□□□□□ -0.15
TCD2YKL027W KRE2P27809 442 aa14.1□□□□□ -0.15
TCD2YKL027W NUG1P40010 520 aaKnown RBP14.1□□□□□ -0.15
TCD2YKL027W ECM16Q04217 1267 aaKnown RBP14.1□□□□□ -0.15
TCD2YKL027W ICL1P28240 557 aaPredicted RBP14.09□□□□□ -0.15
TCD2YKL027W HKR1P41809 1802 aa14.07□□□□□ -0.16
TCD2YKL027W SEC18P18759 758 aaKnown RBP14.07□□□□□ -0.16
TCD2YKL027W RET1P22276 1149 aaKnown RBP14.07□□□□□ -0.16
TCD2YKL027W POM152P39685 1337 aa14.07□□□□□ -0.16
TCD2YKL027W SPL2P38839 148 aa14.06□□□□□ -0.16
TCD2YKL027W BDP1P46678 594 aa14.06□□□□□ -0.16
TCD2YKL027W SHC1P39000 512 aa14.05□□□□□ -0.16
TCD2YKL027W RPT4P53549 437 aaKnown RBP14.05□□□□□ -0.16
TCD2YKL027W DUR1,2P32528 1835 aaKnown RBP14.04□□□□□ -0.16
TCD2YKL027W SLA1P32790 1244 aa14.04□□□□□ -0.16
TCD2YKL027W RFC1P38630 861 aaKnown RBP14.04□□□□□ -0.16
TCD2YKL027W TOP1P04786 769 aa14.03□□□□□ -0.16
TCD2YKL027W TIF4632P39936 914 aaKnown RBP14.03□□□□□ -0.16
TCD2YKL027W YGL242CP53066 181 aa14.03□□□□□ -0.16
TCD2YKL027W FIG2P25653 1609 aa14.03□□□□□ -0.16
TCD2YKL027W CDC16P09798 840 aa14.02□□□□□ -0.17
TCD2YKL027W MLC1P53141 149 aa14.02□□□□□ -0.17
TCD2YKL027W FPK1P53739 893 aa14.02□□□□□ -0.17
TCD2YKL027W SQS1P53866 767 aaKnown RBP14.02□□□□□ -0.17
TCD2YKL027W NOT3P06102 836 aaKnown RBP14.01□□□□□ -0.17
TCD2YKL027W PIF1P07271 859 aa14.01□□□□□ -0.17
TCD2YKL027W DPL1Q05567 589 aa14.01□□□□□ -0.17
TCD2YKL027W PDR18P53756 1333 aa14.01□□□□□ -0.17
TCD2YKL027W FAS2P19097 1887 aaKnown RBP14□□□□□ -0.17
TCD2YKL027W AI2P03876 854 aa14□□□□□ -0.17
TCD2YKL027W ECM21P38167 1117 aaKnown RBP14□□□□□ -0.17
TCD2YKL027W NKP2Q06162 153 aa14□□□□□ -0.17
TCD2YKL027W PSF3Q12146 194 aa14□□□□□ -0.17
TCD2YKL027W DIP2Q12220 943 aaPredicted RBP14□□□□□ -0.17
TCD2YKL027W RRI2Q12348 645 aa14□□□□□ -0.17
TCD2YKL027W SET4P42948 560 aa13.99□□□□□ -0.17
TCD2YKL027W YNL193WP53870 558 aa13.99□□□□□ -0.17
TCD2YKL027W IRC4Q03036 179 aa13.99□□□□□ -0.17
TCD2YKL027W RPN7Q06103 429 aaKnown RBP13.98□□□□□ -0.17
TCD2YKL027W ATG20Q07528 640 aa13.98□□□□□ -0.17
TCD2YKL027W LCB1P25045 558 aaKnown RBP13.97□□□□□ -0.17
TCD2YKL027W KTR3P38130 404 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms