RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W ETT1Q08421 412 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W ATE1P16639 503 aa8.3□□□□□ -1.08
TOD6YBL054W CPS1P27614 576 aa8.3□□□□□ -1.08
TOD6YBL054W ECM1P39715 212 aa8.3□□□□□ -1.08
TOD6YBL054W TRS33Q99394 268 aa8.3□□□□□ -1.08
TOD6YBL054W RPS24AP0CX31 135 aaKnown RBP8.29□□□□□ -1.08
TOD6YBL054W RPS24BP0CX32 135 aaKnown RBP8.29□□□□□ -1.08
TOD6YBL054W FRS2P15625 503 aaKnown RBP8.29□□□□□ -1.08
TOD6YBL054W PRX1P34227 261 aaKnown RBP8.29□□□□□ -1.08
TOD6YBL054W NTH2P35172 780 aa8.29□□□□□ -1.08
TOD6YBL054W MED8P38304 223 aa8.29□□□□□ -1.08
TOD6YBL054W NUG1P40010 520 aaKnown RBP8.29□□□□□ -1.08
TOD6YBL054W DSN1P40568 576 aa8.29□□□□□ -1.08
TOD6YBL054W RIA1P53893 1110 aa8.29□□□□□ -1.08
TOD6YBL054W MRS2Q01926 470 aa8.29□□□□□ -1.08
TOD6YBL054W NOP8Q08287 484 aaPredicted RBP8.29□□□□□ -1.08
TOD6YBL054W BMS1Q08965 1183 aaKnown RBP8.29□□□□□ -1.08
TOD6YBL054W YRF1-2P40105 1681 aa8.29□□□□□ -1.08
TOD6YBL054W RRP5Q05022 1729 aaKnown RBP8.28□□□□□ -1.08
TOD6YBL054W COQ4O13525 335 aa8.27□□□□□ -1.09
TOD6YBL054W MBR1P23493 339 aa8.27□□□□□ -1.09
TOD6YBL054W PRP31P49704 494 aaPredicted RBP8.27□□□□□ -1.09
TOD6YBL054W YGR122WP53272 402 aa8.27□□□□□ -1.09
TOD6YBL054W SGD1Q06132 899 aa8.27□□□□□ -1.09
TOD6YBL054W MRC1P25588 1096 aa8.27□□□□□ -1.09
TOD6YBL054W RPS0BP46654 252 aaKnown RBP8.26□□□□□ -1.09
TOD6YBL054W MSB4Q12317 492 aa8.26□□□□□ -1.09
TOD6YBL054W ADE6P38972 1358 aaKnown RBP8.25□□□□□ -1.09
TOD6YBL054W SPC110P32380 944 aa8.25□□□□□ -1.09
TOD6YBL054W AIM9P40053 627 aaKnown RBP8.25□□□□□ -1.09
TOD6YBL054W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
TOD6YBL054W HGH1P48362 394 aaKnown RBP8.25□□□□□ -1.09
TOD6YBL054W RIM20Q12033 661 aa8.25□□□□□ -1.09
TOD6YBL054W TSR3Q12094 313 aaKnown RBP8.25□□□□□ -1.09
TOD6YBL054W PET111P08468 800 aa8.24□□□□□ -1.09
TOD6YBL054W AAP1P37898 856 aaKnown RBP8.24□□□□□ -1.09
TOD6YBL054W BOI2P39969 1040 aa8.24□□□□□ -1.09
TOD6YBL054W CTH1P47976 325 aa8.24□□□□□ -1.09
TOD6YBL054W YGL140CP53120 1219 aa8.24□□□□□ -1.09
TOD6YBL054W YGL082WP53155 381 aa8.24□□□□□ -1.09
TOD6YBL054W SML1Q04964 104 aa8.24□□□□□ -1.09
TOD6YBL054W YOL087CQ99247 1116 aa8.24□□□□□ -1.09
TOD6YBL054W SWE1P32944 819 aa8.23□□□□□ -1.09
TOD6YBL054W TTI1P36097 1038 aa8.23□□□□□ -1.09
TOD6YBL054W CTF18P49956 741 aa8.23□□□□□ -1.09
TOD6YBL054W PRP43P53131 767 aaKnown RBP8.23□□□□□ -1.09
TOD6YBL054W RMD1Q03441 430 aa8.23□□□□□ -1.09
TOD6YBL054W COG4Q06096 861 aa8.23□□□□□ -1.09
TOD6YBL054W TLG2Q08144 397 aa8.23□□□□□ -1.09
TOD6YBL054W DDP1Q99321 188 aaKnown RBP8.23□□□□□ -1.09
TOD6YBL054W RTT107P38850 1070 aa8.22□□□□□ -1.09
TOD6YBL054W VPS41P38959 992 aa8.22□□□□□ -1.09
TOD6YBL054W YIL177CP40434 1758 aa8.22□□□□□ -1.09
TOD6YBL054W YJL225CP40889 1758 aa8.22□□□□□ -1.09
TOD6YBL054W CPA2P03965 1118 aaKnown RBP8.22□□□□□ -1.09
TOD6YBL054W TPM1P17536 199 aaKnown RBP8.22□□□□□ -1.09
TOD6YBL054W SWC3P31376 625 aa8.22□□□□□ -1.09
TOD6YBL054W GIN4Q12263 1142 aa8.22□□□□□ -1.09
TOD6YBL054W YKL068W-AQ3E826 78 aa8.22□□□□□ -1.09
TOD6YBL054W PDR18P53756 1333 aa8.21□□□□□ -1.1
TOD6YBL054W MRP7P12687 371 aa8.21□□□□□ -1.1
TOD6YBL054W MSH1P25846 959 aa8.21□□□□□ -1.1
TOD6YBL054W YMR102CQ03177 834 aa8.21□□□□□ -1.1
TOD6YBL054W SRC1Q03707 834 aa8.21□□□□□ -1.1
TOD6YBL054W AOS1Q06624 347 aa8.21□□□□□ -1.1
TOD6YBL054W RDS1P25611 832 aa8.2□□□□□ -1.1
TOD6YBL054W HSP104P31539 908 aaKnown RBP8.2□□□□□ -1.1
TOD6YBL054W ECM21P38167 1117 aaKnown RBP8.2□□□□□ -1.1
TOD6YBL054W GDT1P38301 280 aaPredicted RBP8.2□□□□□ -1.1
TOD6YBL054W RRM3P38766 723 aa8.2□□□□□ -1.1
TOD6YBL054W ENT3P47160 408 aa8.2□□□□□ -1.1
TOD6YBL054W ENV11P53246 860 aa8.2□□□□□ -1.1
TOD6YBL054W GPA1P08539 472 aa8.19□□□□□ -1.1
TOD6YBL054W YER130CP39959 443 aa8.19□□□□□ -1.1
TOD6YBL054W MVP1P40959 511 aaKnown RBP8.19□□□□□ -1.1
TOD6YBL054W OSW7P43611 510 aa8.19□□□□□ -1.1
TOD6YBL054W BRE1Q07457 700 aaKnown RBP8.19□□□□□ -1.1
TOD6YBL054W YOL057WQ08225 711 aa8.19□□□□□ -1.1
TOD6YBL054W NCB2Q92317 146 aa8.19□□□□□ -1.1
TOD6YBL054W URB1P34241 1764 aaKnown RBP8.19□□□□□ -1.1
TOD6YBL054W SPO22P40511 975 aa8.18□□□□□ -1.1
TOD6YBL054W BBC1P47068 1157 aa8.18□□□□□ -1.1
TOD6YBL054W VMS1Q04311 632 aaKnown RBP8.18□□□□□ -1.1
TOD6YBL054W NSE3Q05541 303 aa8.18□□□□□ -1.1
TOD6YBL054W CTI6Q08923 506 aa8.18□□□□□ -1.1
TOD6YBL054W TY4B-HP0C2J7 1802 aa8.18□□□□□ -1.1
TOD6YBL054W TY4B-JP47024 1803 aa8.18□□□□□ -1.1
TOD6YBL054W FYV10P40492 516 aa8.18□□□□□ -1.1
TOD6YBL054W ELG1Q12050 791 aa8.18□□□□□ -1.1
TOD6YBL054W YPL150WQ12152 901 aa8.18□□□□□ -1.1
TOD6YBL054W PSH1Q12161 406 aa8.18□□□□□ -1.1
TOD6YBL054W PET123P17558 318 aa8.17□□□□□ -1.1
TOD6YBL054W UGA3P26370 528 aa8.17□□□□□ -1.1
TOD6YBL054W MRPS35P53292 345 aa8.17□□□□□ -1.1
TOD6YBL054W ARP5P53946 755 aa8.17□□□□□ -1.1
TOD6YBL054W WAR1Q03631 944 aa8.17□□□□□ -1.1
TOD6YBL054W RPN7Q06103 429 aaKnown RBP8.17□□□□□ -1.1
TOD6YBL054W YPT11P48559 417 aa8.16□□□□□ -1.1
TOD6YBL054W YNR029CP53729 429 aaKnown RBP8.16□□□□□ -1.1
TOD6YBL054W YDR306CQ06640 478 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms