RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCR1	SCR1	RPN1	P38764	993 aa	Known RBP	18.43	■□□□□ 0.54
SCR1	SCR1	UBP16	Q02863	499 aa		18.43	■□□□□ 0.54
SCR1	SCR1	SWI1	P09547	1314 aa		18.43	■□□□□ 0.54
SCR1	SCR1	MRP7	P12687	371 aa		18.42	■□□□□ 0.54
SCR1	SCR1	ICL1	P28240	557 aa	Predicted RBP	18.42	■□□□□ 0.54
SCR1	SCR1	SHC1	P39000	512 aa		18.42	■□□□□ 0.54
SCR1	SCR1	TOP1	P04786	769 aa		18.41	■□□□□ 0.54
SCR1	SCR1	CAF20	P12962	161 aa	Known RBP	18.41	■□□□□ 0.54
SCR1	SCR1	SUI2	P20459	304 aa	Known RBP	18.41	■□□□□ 0.54
SCR1	SCR1	CDC45	Q08032	650 aa		18.41	■□□□□ 0.54
SCR1	SCR1	PMD1	P32634	1753 aa		18.4	■□□□□ 0.54
SCR1	SCR1	FRD1	P32614	470 aa	Known RBP	18.4	■□□□□ 0.54
SCR1	SCR1	NUP133	P36161	1157 aa		18.4	■□□□□ 0.54
SCR1	SCR1	MAK21	Q12176	1025 aa	Known RBP	18.38	■□□□□ 0.53
SCR1	SCR1	NOP8	Q08287	484 aa	Predicted RBP	18.36	■□□□□ 0.53
SCR1	SCR1	SET1	P38827	1080 aa	Known RBP	18.35	■□□□□ 0.53
SCR1	SCR1	ATG20	Q07528	640 aa		18.35	■□□□□ 0.53
SCR1	SCR1	SLI15	P38283	698 aa		18.34	■□□□□ 0.53
SCR1	SCR1	PEX21	P50091	288 aa		18.34	■□□□□ 0.53
SCR1	SCR1	YRB30	P53107	440 aa	Predicted RBP	18.34	■□□□□ 0.53
SCR1	SCR1	FCP1	Q03254	732 aa		18.33	■□□□□ 0.52
SCR1	SCR1	SUP35	P05453	685 aa	Known RBP	18.31	■□□□□ 0.52
SCR1	SCR1	ITC1	P53125	1264 aa		18.31	■□□□□ 0.52
SCR1	SCR1	SAC3	P46674	1301 aa		18.3	■□□□□ 0.52
SCR1	SCR1	DPH6	Q12429	685 aa		18.3	■□□□□ 0.52
SCR1	SCR1	RET1	P22276	1149 aa	Known RBP	18.29	■□□□□ 0.52
SCR1	SCR1	NSR1	P27476	414 aa	Known RBP RIP-Chip data	18.28	■□□□□ 0.52	not detected
SCR1	SCR1	YPP1	P46951	817 aa		18.28	■□□□□ 0.52
SCR1	SCR1	PSH1	Q12161	406 aa		18.28	■□□□□ 0.52
SCR1	SCR1	MTC5	Q03897	1148 aa		18.27	■□□□□ 0.52
SCR1	SCR1	UBX2	Q04228	584 aa		18.27	■□□□□ 0.52
SCR1	SCR1	DIP2	Q12220	943 aa	Predicted RBP	18.27	■□□□□ 0.52
SCR1	SCR1	MSM1	P22438	575 aa		18.26	■□□□□ 0.51
SCR1	SCR1	TIF4632	P39936	914 aa	Known RBP	18.26	■□□□□ 0.51
SCR1	SCR1	SSA4	P22202	642 aa	Known RBP	18.25	■□□□□ 0.51
SCR1	SCR1	DPL1	Q05567	589 aa		18.25	■□□□□ 0.51
SCR1	SCR1	RVB2	Q12464	471 aa	Known RBP	18.25	■□□□□ 0.51
SCR1	SCR1	RTG2	P32608	588 aa	Known RBP	18.23	■□□□□ 0.51
SCR1	SCR1	ICP55	P40051	511 aa		18.23	■□□□□ 0.51
SCR1	SCR1	THS1	P04801	734 aa	Known RBP	18.22	■□□□□ 0.51
SCR1	SCR1	KRE2	P27809	442 aa		18.22	■□□□□ 0.51
SCR1	SCR1	UBP12	P39538	1254 aa		18.22	■□□□□ 0.51
SCR1	SCR1	YGR122W	P53272	402 aa		18.22	■□□□□ 0.51
SCR1	SCR1	RAD24	P32641	659 aa		18.21	■□□□□ 0.51
SCR1	SCR1	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	18.21	■□□□□ 0.51	not detected
SCR1	SCR1	PUS5	Q06244	254 aa		18.21	■□□□□ 0.51
SCR1	SCR1	SWC3	P31376	625 aa		18.19	■□□□□ 0.5
SCR1	SCR1	HKR1	P41809	1802 aa		18.19	■□□□□ 0.5
SCR1	SCR1	RPS19A	P07280	144 aa	Known RBP	18.18	■□□□□ 0.5
SCR1	SCR1	RPS19B	P07281	144 aa	Predicted RBP	18.18	■□□□□ 0.5
SCR1	SCR1	BOI2	P39969	1040 aa		18.18	■□□□□ 0.5
SCR1	SCR1	TRP5	P00931	707 aa	Known RBP	18.17	■□□□□ 0.5
SCR1	SCR1	CSI1	Q04368	295 aa		18.17	■□□□□ 0.5
SCR1	SCR1	YLR278C	Q05854	1341 aa		18.17	■□□□□ 0.5
SCR1	SCR1	SNU66	Q12420	587 aa	Predicted RBP	18.16	■□□□□ 0.5
SCR1	SCR1	GLC3	P32775	704 aa		18.15	■□□□□ 0.5
SCR1	SCR1	NGR1	P32831	672 aa	Known RBP	18.15	■□□□□ 0.5
SCR1	SCR1	THI3	Q07471	609 aa		18.15	■□□□□ 0.5
SCR1	SCR1	FAS2	P19097	1887 aa	Known RBP	18.15	■□□□□ 0.5
SCR1	SCR1	MGM1	P32266	881 aa		18.14	■□□□□ 0.49
SCR1	SCR1	TIM50	Q02776	476 aa		18.14	■□□□□ 0.49
SCR1	SCR1	RPT4	P53549	437 aa	Known RBP	18.13	■□□□□ 0.49
SCR1	SCR1	SRC1	Q03707	834 aa		18.13	■□□□□ 0.49
SCR1	SCR1	CRF1	Q04930	467 aa		18.13	■□□□□ 0.49
SCR1	SCR1	SET4	P42948	560 aa		18.12	■□□□□ 0.49
SCR1	SCR1	RRG1	Q12167	365 aa	Predicted RBP	18.12	■□□□□ 0.49
SCR1	SCR1	NUG1	P40010	520 aa	Known RBP	18.11	■□□□□ 0.49
SCR1	SCR1	YIL092W	P40497	633 aa		18.11	■□□□□ 0.49
SCR1	SCR1	RAD2	P07276	1031 aa		18.1	■□□□□ 0.49
SCR1	SCR1	DAL5	P15365	543 aa		18.1	■□□□□ 0.49
SCR1	SCR1	SPL2	P38839	148 aa		18.1	■□□□□ 0.49
SCR1	SCR1	FET4	P40988	552 aa		18.1	■□□□□ 0.49
SCR1	SCR1	RRD1	P40454	393 aa	Known RBP	18.07	■□□□□ 0.48
SCR1	SCR1	TRM44	Q02648	567 aa	Known RBP	18.07	■□□□□ 0.48
SCR1	SCR1	PSF3	Q12146	194 aa		18.07	■□□□□ 0.48
SCR1	SCR1	AIM7	Q12156	149 aa		18.07	■□□□□ 0.48
SCR1	SCR1	AFG2	P32794	780 aa		18.06	■□□□□ 0.48
SCR1	SCR1	PRS1	P32895	427 aa	Known RBP	18.05	■□□□□ 0.48
SCR1	SCR1	HGH1	P48362	394 aa	Known RBP	18.05	■□□□□ 0.48
SCR1	SCR1	YGR117C	P53270	476 aa		18.05	■□□□□ 0.48
SCR1	SCR1	PRP42	Q03776	544 aa	Known RBP	18.05	■□□□□ 0.48
SCR1	SCR1	GAS5	Q08193	484 aa		18.05	■□□□□ 0.48
SCR1	SCR1	ADR1	P07248	1323 aa		18.04	■□□□□ 0.48
SCR1	SCR1	VHR2	P40041	505 aa		18.04	■□□□□ 0.48
SCR1	SCR1	FIG2	P25653	1609 aa		18.03	■□□□□ 0.48
SCR1	SCR1	GAP1	P19145	602 aa	Predicted RBP	18.03	■□□□□ 0.48
SCR1	SCR1	SSF1	P38789	453 aa	Predicted RBP	18.03	■□□□□ 0.48
SCR1	SCR1	HXT10	P43581	546 aa		18.03	■□□□□ 0.48
SCR1	SCR1	YNG2	P38806	282 aa	Known RBP	18.02	■□□□□ 0.48
SCR1	SCR1	EMP47	P43555	445 aa		18.01	■□□□□ 0.47
SCR1	SCR1	IRC4	Q03036	179 aa		18.01	■□□□□ 0.47
SCR1	SCR1	GSM1	P42950	618 aa		18	■□□□□ 0.47
SCR1	SCR1	SEN54	Q02825	467 aa	Predicted RBP	18	■□□□□ 0.47
SCR1	SCR1	LCB1	P25045	558 aa	Known RBP	17.99	■□□□□ 0.47
SCR1	SCR1	PEA2	P40091	420 aa		17.99	■□□□□ 0.47
SCR1	SCR1	JJJ2	P46997	583 aa		17.99	■□□□□ 0.47
SCR1	SCR1	VPS4	P52917	437 aa		17.99	■□□□□ 0.47
SCR1	SCR1	POM152	P39685	1337 aa		17.98	■□□□□ 0.47
SCR1	SCR1	HPR1	P17629	752 aa	Known RBP	17.97	■□□□□ 0.47
SCR1	SCR1	TFA1	P36100	482 aa		17.97	■□□□□ 0.47

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms