RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Skint5A7XUY5 1461 aa13.97□□□□□ -0.17
Prpf39-201ENSMUST00000120580 Arap3Q8R5G7 1538 aa13.96□□□□□ -0.17
Prpf39-201ENSMUST00000120580 Map4P27546 1125 aaKnown RBP13.96□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Ppargc1bQ8VHJ7 1014 aa13.96□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Trak1Q6PD31 939 aa13.95□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Aebp2Q9Z248 504 aaKnown RBP13.95□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Thsd7aQ69ZU6 1645 aa13.95□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Polr3aB2RXC6 1390 aa13.95□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Hfm1D3Z4R1 1434 aa13.95□□□□□ -0.18
Prpf39-201ENSMUST00000120580 4930407I10RikD3Z5T8 1512 aa13.95□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Usp32F8VPZ3 1604 aa13.94□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Phlpp1Q8CHE4 1687 aa13.94□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Bcl9Q9D219 1425 aa13.94□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Nwd1A6H603 1563 aa13.93□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Nsd2Q8BVE8 1365 aa13.93□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Ppp1r18Q8BQ30 594 aa13.91□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Abca14E9Q8F8 1683 aa13.9□□□□□ -0.18
Prpf39-201ENSMUST00000120580 Slit3Q9WVB4 1523 aa13.89□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Ncoa1P70365 1447 aa13.89□□□□□ -0.19
Prpf39-201ENSMUST00000120580 AU022751B1B0V2 589 aa13.88□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Naip7Q9JIB3 1402 aa13.87□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Brwd3A2AHJ4 1799 aa13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 TonslQ6NZL6 1363 aa13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Dip2aQ8BWT5 1523 aa13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Sall3Q62255 1320 aa13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 NclP09405 707 aaKnown RBP13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Lmtk3Q5XJV6 1424 aa13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 NktrP30415 1453 aa13.86□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Kif3bQ61771 747 aa13.85□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Pik3c2bE9QAN8 1632 aa13.84□□□□□ -0.19
Prpf39-201ENSMUST00000120580 Rimbp3Q3V0F0 1606 aa13.83□□□□□ -0.2
Prpf39-201ENSMUST00000120580 Cep170bQ80U49 1574 aa13.81□□□□□ -0.2
Prpf39-201ENSMUST00000120580 D430041D05RikF6ZGR6 1678 aa13.81□□□□□ -0.2
Prpf39-201ENSMUST00000120580 Cps1Q8C196 1500 aa13.8□□□□□ -0.2
Prpf39-201ENSMUST00000120580 IghaA0A0A6YXW6 389 aa13.8□□□□□ -0.2
Prpf39-201ENSMUST00000120580 Med1Q925J9 1575 aa13.8□□□□□ -0.2
Prpf39-201ENSMUST00000120580 Scn4aQ9ER60 1841 aa13.78□□□□□ -0.2
Prpf39-201ENSMUST00000120580 Als2Q920R0 1651 aa13.78□□□□□ -0.2
Prpf39-201ENSMUST00000120580 Mdc1Q5PSV9 1707 aa13.76□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Prrc2bQ7TPM1 1486 aaKnown RBP13.76□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Dapk1Q80YE7 1442 aa13.75□□□□□ -0.21
Prpf39-201ENSMUST00000120580 N4bp2F8VQG7 1678 aaKnown RBP13.75□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Nphp4P59240 1425 aa13.75□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Ltbp4Q8K4G1 1666 aa13.74□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Clstn2Q9ER65 966 aa13.74□□□□□ -0.21
Prpf39-201ENSMUST00000120580 C5P06684 1680 aa13.74□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Unc13bQ9Z1N9 1602 aa13.73□□□□□ -0.21
Prpf39-201ENSMUST00000120580 Kif20bQ80WE4 1774 aaKnown RBP13.72□□□□□ -0.21
Prpf39-201ENSMUST00000120580 ErbinQ80TH2 1402 aa13.7□□□□□ -0.22
Prpf39-201ENSMUST00000120580 NalcnQ8BXR5 1738 aa13.7□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Afap1Q80YS6 731 aa13.7□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Lrrc7Q80TE7 1490 aa13.7□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Gm13697A2AK42 830 aa13.69□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Col18a1P39061 1774 aa13.67□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Ttbk1Q6PCN3 1308 aa13.66□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Mon2Q80TL7 1715 aa13.66□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Nrxn1Q9CS84 1514 aa13.66□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Tnrc6bQ8BKI2 1810 aaKnown RBP13.65□□□□□ -0.22
Prpf39-201ENSMUST00000120580 PalldQ9ET54 1408 aa13.65□□□□□ -0.22
Prpf39-201ENSMUST00000120580 Gm16486A0A1D5RMD1 1434 aa13.62□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Sbno1Q689Z5 1390 aa13.62□□□□□ -0.23
Prpf39-201ENSMUST00000120580 1700123L14RikQ3V2K7 440 aa13.61□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Wnk3Q80XP9 1757 aa13.61□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Sin3aQ60520 1274 aaKnown RBP13.61□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Plekhg5Q66T02 1073 aa13.6□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Scaf11E9PZM7 1456 aaKnown RBP13.59□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Plekhg1F6S200 1446 aa13.59□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Rgl3Q3UYI5 709 aa13.59□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Rims2Q9EQZ7 1530 aa13.59□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Sipa1l2Q80TE4 1722 aa13.59□□□□□ -0.23
Prpf39-201ENSMUST00000120580 Camta1A2A891 1682 aa13.58□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Scn7aB1AYL1 1681 aa13.58□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Nrxn3Q6P9K9 1571 aa13.57□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Adgrl1Q80TR1 1466 aa13.57□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Ubr1O70481 1757 aa13.57□□□□□ -0.24
Prpf39-201ENSMUST00000120580 C3P01027 1663 aa13.54□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Pik3c2aQ61194 1686 aa13.54□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Zbtb7cQ8VCZ7 619 aa13.54□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Kif1aP33173 1695 aa13.53□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Rundc1Q0VDN7 615 aa13.53□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Anks4bQ8K3X6 423 aa13.53□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Col14a1Q80X19 1797 aa13.52□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Robo1O89026 1612 aa13.52□□□□□ -0.24
Prpf39-201ENSMUST00000120580 Gli3Q61602 1583 aa13.52□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Rreb1Q3UH06 1700 aaKnown RBP13.52□□□□□ -0.25
Prpf39-201ENSMUST00000120580 PtprvP70289 1705 aa13.51□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Ifit1bl1D3Z6F0 470 aa13.51□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Rsph4aQ8BYM7 716 aa13.51□□□□□ -0.25
Prpf39-201ENSMUST00000120580 ClspnQ80YR7 1315 aa13.51□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Pik3r4Q8VD65 1358 aa13.5□□□□□ -0.25
Prpf39-201ENSMUST00000120580 KdrP35918 1367 aa13.49□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Slc52a2Q9D8F3 450 aa13.49□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Csrnp3P59055 597 aa13.48□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Asxl2Q8BZ32 1370 aa13.47□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Grwd1Q810D6 446 aaKnown RBP13.47□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Abca15E9PWH4 1668 aa13.46□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Rock2P70336 1388 aa13.46□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Map2P20357 1828 aa13.46□□□□□ -0.25
Prpf39-201ENSMUST00000120580 Gprasp1Q5U4C1 1347 aa13.46□□□□□ -0.26
Prpf39-201ENSMUST00000120580 InsrP15208 1372 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms