RNA–Protein interactions for RNA: ENSMUST00000120580.7

Prpf39-201, Transcript of Pre-mRNA-processing factor 39, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Prpf39, Length 4,069 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39-201ENSMUST00000120580 Gm35339A0A140LHH9 1649 aa22.12■■□□□ 1.13
Prpf39-201ENSMUST00000120580 NischQ80TM9 1593 aa21.39■■□□□ 1.01
Prpf39-201ENSMUST00000120580 Abcc9P70170 1546 aa20.99■□□□□ 0.95
Prpf39-201ENSMUST00000120580 Abcc8B2RUS7 1588 aa20.74■□□□□ 0.91
Prpf39-201ENSMUST00000120580 ScribQ80U72 1612 aa19.95■□□□□ 0.78
Prpf39-201ENSMUST00000120580 Dcaf1Q80TR8 1506 aa19.32■□□□□ 0.68
Prpf39-201ENSMUST00000120580 Kdm5dQ62240 1548 aa19.11■□□□□ 0.65
Prpf39-201ENSMUST00000120580 Ccdc180J3QNE4 1664 aa19.01■□□□□ 0.63
Prpf39-201ENSMUST00000120580 NacadQ5SWP3 1504 aa18.89■□□□□ 0.62
Prpf39-201ENSMUST00000120580 Rb1cc1Q9ESK9 1588 aa18.69■□□□□ 0.58
Prpf39-201ENSMUST00000120580 Sycp2Q9CUU3 1500 aa18.64■□□□□ 0.58
Prpf39-201ENSMUST00000120580 BicraF8VPZ9 1578 aa18.56■□□□□ 0.56
Prpf39-201ENSMUST00000120580 Baz1aO88379 1555 aa18.51■□□□□ 0.55
Prpf39-201ENSMUST00000120580 Crybg2B7ZCC2 1516 aa18.45■□□□□ 0.54
Prpf39-201ENSMUST00000120580 Rtl1Q7M732 1744 aa18.3■□□□□ 0.52
Prpf39-201ENSMUST00000120580 Smarca2Q6DIC0 1577 aa18.19■□□□□ 0.5
Prpf39-201ENSMUST00000120580 Zcchc6Q5BLK4 1491 aaKnown RBP18.03■□□□□ 0.48
Prpf39-201ENSMUST00000120580 Rhox8Q6VSS7 320 aa17.78■□□□□ 0.44
Prpf39-201ENSMUST00000120580 Cecr2E9Q2Z1 1453 aa17.74■□□□□ 0.43
Prpf39-201ENSMUST00000120580 Smarca4Q3TKT4 1613 aaKnown RBP17.6■□□□□ 0.41
Prpf39-201ENSMUST00000120580 Thoc2B1AZI6 1594 aaKnown RBP17.54■□□□□ 0.4
Prpf39-201ENSMUST00000120580 Unc13aQ4KUS2 1712 aa17.49■□□□□ 0.39
Prpf39-201ENSMUST00000120580 Synj1Q8CHC4 1574 aa17.49■□□□□ 0.39
Prpf39-201ENSMUST00000120580 Iqgap2Q3UQ44 1575 aa17.43■□□□□ 0.38
Prpf39-201ENSMUST00000120580 Cttnbp2B9EJA2 1648 aa17.43■□□□□ 0.38
Prpf39-201ENSMUST00000120580 Atad2bE9Q166 1460 aaKnown RBP17.38■□□□□ 0.37
Prpf39-201ENSMUST00000120580 CftrP26361 1476 aa17.35■□□□□ 0.37
Prpf39-201ENSMUST00000120580 Wdr62Q3U3T8 1523 aa17.3■□□□□ 0.36
Prpf39-201ENSMUST00000120580 Pds5bQ4VA53 1446 aaKnown RBP17.29■□□□□ 0.36
Prpf39-201ENSMUST00000120580 Top2bQ64511 1612 aa17.28■□□□□ 0.36
Prpf39-201ENSMUST00000120580 Frmpd1A2AKB4 1549 aa17.19■□□□□ 0.34
Prpf39-201ENSMUST00000120580 Brd4Q9ESU6 1400 aaKnown RBP17.12■□□□□ 0.33
Prpf39-201ENSMUST00000120580 Fam135aQ6NS59 1506 aa17.1■□□□□ 0.33
Prpf39-201ENSMUST00000120580 TnnQ80Z71 1560 aa17.07■□□□□ 0.32
Prpf39-201ENSMUST00000120580 Cc2d2aQ8CFW7 1633 aa16.99■□□□□ 0.31
Prpf39-201ENSMUST00000120580 Lamc3Q9R0B6 1581 aa16.88■□□□□ 0.29
Prpf39-201ENSMUST00000120580 Golga3P55937 1487 aa16.84■□□□□ 0.29
Prpf39-201ENSMUST00000120580 Ccdc136Q3TVA9 1136 aa16.81■□□□□ 0.28
Prpf39-201ENSMUST00000120580 Ercc6F8VPZ5 1481 aa16.8■□□□□ 0.28
Prpf39-201ENSMUST00000120580 Dnajc5bQ9CQ94 199 aa16.79■□□□□ 0.28
Prpf39-201ENSMUST00000120580 Baz1bQ9Z277 1479 aa16.76■□□□□ 0.27
Prpf39-201ENSMUST00000120580 Rsf1E9PWW9 1441 aaKnown RBP16.7■□□□□ 0.26
Prpf39-201ENSMUST00000120580 Ccdc88bQ4QRL3 1481 aa16.65■□□□□ 0.26
Prpf39-201ENSMUST00000120580 Top2aQ01320 1528 aaKnown RBP16.64■□□□□ 0.25
Prpf39-201ENSMUST00000120580 Phldb1Q6PDH0 1371 aaKnown RBP16.61■□□□□ 0.25
Prpf39-201ENSMUST00000120580 Eif4g1Q6NZJ6 1600 aaKnown RBP16.59■□□□□ 0.25
Prpf39-201ENSMUST00000120580 Fmn1Q05860 1466 aa16.58■□□□□ 0.25
Prpf39-201ENSMUST00000120580 Camsap1A2AHC3 1581 aa16.57■□□□□ 0.24
Prpf39-201ENSMUST00000120580 Trim41Q5NCC3 630 aa16.57■□□□□ 0.24
Prpf39-201ENSMUST00000120580 Kif21aQ9QXL2 1672 aa16.46■□□□□ 0.23
Prpf39-201ENSMUST00000120580 Gpatch8A2A6A1 1505 aa16.46■□□□□ 0.23
Prpf39-201ENSMUST00000120580 HrcG5E8J6 738 aa16.4■□□□□ 0.22
Prpf39-201ENSMUST00000120580 Cep164Q5DU05 1446 aa16.39■□□□□ 0.21
Prpf39-201ENSMUST00000120580 Setd1bQ8CFT2 1985 aa16.37■□□□□ 0.21
Prpf39-201ENSMUST00000120580 Mrc2Q64449 1479 aa16.34■□□□□ 0.21
Prpf39-201ENSMUST00000120580 Chic1Q8CBW7 227 aa16.3■□□□□ 0.2
Prpf39-201ENSMUST00000120580 Grin2bQ01097 1482 aa16.29■□□□□ 0.2
Prpf39-201ENSMUST00000120580 Lrriq1Q0P5X1 1673 aa16.27■□□□□ 0.19
Prpf39-201ENSMUST00000120580 NrkQ9R0G8 1455 aa16.25■□□□□ 0.19
Prpf39-201ENSMUST00000120580 PtprkP35822 1457 aa16.24■□□□□ 0.19
Prpf39-201ENSMUST00000120580 Rapgef2Q8CHG7 1496 aa16.24■□□□□ 0.19
Prpf39-201ENSMUST00000120580 Cux2P70298 1426 aa16.23■□□□□ 0.19
Prpf39-201ENSMUST00000120580 Kif15Q6P9L6 1387 aa16.23■□□□□ 0.19
Prpf39-201ENSMUST00000120580 Samd9lQ69Z37 1561 aa16.22■□□□□ 0.19
Prpf39-201ENSMUST00000120580 Shroom4Q1W617 1475 aa16.14■□□□□ 0.17
Prpf39-201ENSMUST00000120580 PogzQ8BZH4 1409 aaKnown RBP16.14■□□□□ 0.17
Prpf39-201ENSMUST00000120580 Crocc2F6XLV1 1638 aa16.12■□□□□ 0.17
Prpf39-201ENSMUST00000120580 Urb2E9Q7L1 1524 aaKnown RBP16.06■□□□□ 0.16
Prpf39-201ENSMUST00000120580 Duox2A2AQ99 1517 aa16.05■□□□□ 0.16
Prpf39-201ENSMUST00000120580 Ccdc18Q640L5 1455 aa16.04■□□□□ 0.16
Prpf39-201ENSMUST00000120580 Arhgap35Q91YM2 1499 aa16.04■□□□□ 0.16
Prpf39-201ENSMUST00000120580 Ubl4bQ9CQ84 188 aa16.04■□□□□ 0.16
Prpf39-201ENSMUST00000120580 Eif4g3Q80XI3 1579 aaKnown RBP16.04■□□□□ 0.16
Prpf39-201ENSMUST00000120580 Pbrm1Q8BSQ9 1634 aaKnown RBP16.02■□□□□ 0.16
Prpf39-201ENSMUST00000120580 LrpprcQ6PB66 1392 aaKnown RBP16.02■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Magi3Q9EQJ9 1476 aa16.01■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Esf1Q3V1V3 845 aaKnown RBP16.01■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Cngb1E1AZ71 1325 aa16■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Map3k1P53349 1493 aa15.99■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Mroh2bQ7M6Y6 1581 aa15.98■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Efcab5A0JP43 1406 aa15.98■□□□□ 0.15
Prpf39-201ENSMUST00000120580 Erich3F6QRE9 1637 aa15.97■□□□□ 0.15
Prpf39-201ENSMUST00000120580 AqrQ8CFQ3 1481 aaKnown RBP15.96■□□□□ 0.15
Prpf39-201ENSMUST00000120580 SynmQ70IV5 1561 aa15.95■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Dhx29Q6PGC1 1365 aaKnown RBP15.94■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Disp1Q3TDN0 1521 aa15.93■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Pla2r1Q62028 1487 aa15.92■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Plb1Q3TTY0 1478 aa15.92■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Cep162Q6ZQ06 1403 aa15.91■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Zcchc11B2RX14 1644 aaKnown RBP15.91■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Lmo7E9PYF4 1699 aaKnown RBP15.9■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Adamts12Q811B3 1600 aa15.9■□□□□ 0.14
Prpf39-201ENSMUST00000120580 Nup160Q9Z0W3 1402 aaKnown RBP15.89■□□□□ 0.13
Prpf39-201ENSMUST00000120580 Abca16E9PWJ7 1678 aa15.89■□□□□ 0.13
Prpf39-201ENSMUST00000120580 Ankrd26Q811D2 1581 aa15.86■□□□□ 0.13
Prpf39-201ENSMUST00000120580 Rusc2Q80U22 1514 aa15.84■□□□□ 0.13
Prpf39-201ENSMUST00000120580 Abca5Q8K448 1642 aa15.83■□□□□ 0.12
Prpf39-201ENSMUST00000120580 Abcc2Q8VI47 1543 aa15.81■□□□□ 0.12
Prpf39-201ENSMUST00000120580 Grin2aP35436 1464 aa15.79■□□□□ 0.12
Prpf39-201ENSMUST00000120580 Cux1P53564 1515 aa15.77■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms